Protein–RNA interactions for Protein: E9PL57

NEDD8-MDP1, NEDD8-MDP1 readthrough (Fragment), humanhuman

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1E9PL57 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC2.65□□□□□ -1.99
NEDD8-MDP1E9PL57 RPL7P20-201ENST00000520308 745 ntBASIC2.65□□□□□ -1.99
NEDD8-MDP1E9PL57 AC243972.3-201ENST00000539655 198 ntBASIC2.65□□□□□ -1.99
NEDD8-MDP1E9PL57 AC027176.1-201ENST00000560204 514 ntBASIC2.65□□□□□ -1.99
NEDD8-MDP1E9PL57 AC023043.3-201ENST00000593113 385 ntBASIC2.65□□□□□ -1.99
NEDD8-MDP1E9PL57 AC007621.1-201ENST00000604544 437 ntBASIC2.65□□□□□ -1.99
NEDD8-MDP1E9PL57 AL161729.4-201ENST00000604650 476 ntBASIC2.65□□□□□ -1.99
NEDD8-MDP1E9PL57 AC097065.2-201ENST00000608159 533 ntBASIC2.65□□□□□ -1.99
NEDD8-MDP1E9PL57 AC107294.1-201ENST00000609524 467 ntBASIC2.65□□□□□ -1.99
NEDD8-MDP1E9PL57 PISRT1-201ENST00000626175 531 ntBASIC2.65□□□□□ -1.99
NEDD8-MDP1E9PL57 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC2.65□□□□□ -1.99
NEDD8-MDP1E9PL57 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.64□□□□□ -1.99
NEDD8-MDP1E9PL57 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC2.64□□□□□ -1.99
NEDD8-MDP1E9PL57 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.64□□□□□ -1.99
NEDD8-MDP1E9PL57 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
NEDD8-MDP1E9PL57 CR848007.1-201ENST00000442354 1699 ntBASIC2.64□□□□□ -1.99
NEDD8-MDP1E9PL57 RNU6-960P-201ENST00000364056 120 ntBASIC2.64□□□□□ -1.99
NEDD8-MDP1E9PL57 RNY4P34-201ENST00000364779 95 ntBASIC2.64□□□□□ -1.99
NEDD8-MDP1E9PL57 XGY1-201ENST00000381172 446 ntBASIC2.64□□□□□ -1.99
NEDD8-MDP1E9PL57 Y_RNA.553-201ENST00000384670 102 ntBASIC2.64□□□□□ -1.99
NEDD8-MDP1E9PL57 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC2.64□□□□□ -1.99
NEDD8-MDP1E9PL57 USP9YP20-201ENST00000419224 558 ntBASIC2.64□□□□□ -1.99
NEDD8-MDP1E9PL57 AC093106.2-201ENST00000428212 385 ntBASIC2.64□□□□□ -1.99
NEDD8-MDP1E9PL57 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC2.64□□□□□ -1.99
NEDD8-MDP1E9PL57 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC2.64□□□□□ -1.99
NEDD8-MDP1E9PL57 MTND4P32-201ENST00000437189 1237 ntBASIC2.64□□□□□ -1.99
NEDD8-MDP1E9PL57 AC011816.1-201ENST00000441346 546 ntBASIC2.64□□□□□ -1.99
NEDD8-MDP1E9PL57 AC104472.2-201ENST00000469035 601 ntBASIC2.64□□□□□ -1.99
NEDD8-MDP1E9PL57 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC2.64□□□□□ -1.99
NEDD8-MDP1E9PL57 AL160314.1-201ENST00000490836 438 ntBASIC2.64□□□□□ -1.99
NEDD8-MDP1E9PL57 AC010424.1-201ENST00000506336 297 ntBASIC2.64□□□□□ -1.99
NEDD8-MDP1E9PL57 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC2.64□□□□□ -1.99
NEDD8-MDP1E9PL57 AC022447.1-201ENST00000515358 464 ntBASIC2.64□□□□□ -1.99
NEDD8-MDP1E9PL57 RNU2-10P-201ENST00000516375 211 ntBASIC2.64□□□□□ -1.99
NEDD8-MDP1E9PL57 RNU6-1092P-201ENST00000516955 87 ntBASIC2.64□□□□□ -1.99
NEDD8-MDP1E9PL57 RNA5SP471-201ENST00000516971 106 ntBASIC2.64□□□□□ -1.99
NEDD8-MDP1E9PL57 RNU6-1220P-201ENST00000517126 108 ntBASIC2.64□□□□□ -1.99
NEDD8-MDP1E9PL57 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC2.64□□□□□ -1.99
NEDD8-MDP1E9PL57 AC022616.3-201ENST00000523940 148 ntBASIC2.64□□□□□ -1.99
NEDD8-MDP1E9PL57 AP000867.2-201ENST00000532468 320 ntBASIC2.64□□□□□ -1.99
NEDD8-MDP1E9PL57 MGST1-215ENST00000540056 546 ntTSL 3 BASIC2.64□□□□□ -1.99
NEDD8-MDP1E9PL57 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC2.64□□□□□ -1.99
NEDD8-MDP1E9PL57 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC2.64□□□□□ -1.99
NEDD8-MDP1E9PL57 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC2.64□□□□□ -1.99
NEDD8-MDP1E9PL57 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC2.64□□□□□ -1.99
NEDD8-MDP1E9PL57 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC2.64□□□□□ -1.99
NEDD8-MDP1E9PL57 GLUD1P4-201ENST00000590914 418 ntBASIC2.64□□□□□ -1.99
NEDD8-MDP1E9PL57 RSL24D1P11-201ENST00000591045 491 ntBASIC2.64□□□□□ -1.99
NEDD8-MDP1E9PL57 SEPT7P9-203ENST00000604116 343 ntBASIC2.64□□□□□ -1.99
NEDD8-MDP1E9PL57 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC2.64□□□□□ -1.99
NEDD8-MDP1E9PL57 CR381653.2-201ENST00000624041 768 ntBASIC2.64□□□□□ -1.99
NEDD8-MDP1E9PL57 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC2.64□□□□□ -1.99
NEDD8-MDP1E9PL57 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC2.64□□□□□ -1.99
NEDD8-MDP1E9PL57 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC2.64□□□□□ -1.99
NEDD8-MDP1E9PL57 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC2.64□□□□□ -1.99
NEDD8-MDP1E9PL57 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.64□□□□□ -1.99
NEDD8-MDP1E9PL57 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.64□□□□□ -1.99
NEDD8-MDP1E9PL57 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
NEDD8-MDP1E9PL57 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.63□□□□□ -1.99
NEDD8-MDP1E9PL57 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC2.63□□□□□ -1.99
NEDD8-MDP1E9PL57 HSPE1P11-201ENST00000339579 310 ntBASIC2.63□□□□□ -1.99
NEDD8-MDP1E9PL57 SNORD56.2-201ENST00000363242 71 ntBASIC2.63□□□□□ -1.99
NEDD8-MDP1E9PL57 RNU6-169P-201ENST00000365336 107 ntBASIC2.63□□□□□ -1.99
NEDD8-MDP1E9PL57 RNU1-109P-201ENST00000383960 147 ntBASIC2.63□□□□□ -1.99
NEDD8-MDP1E9PL57 RNU6-39P-201ENST00000384344 107 ntBASIC2.63□□□□□ -1.99
NEDD8-MDP1E9PL57 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC2.63□□□□□ -1.99
NEDD8-MDP1E9PL57 RNU6-195P-201ENST00000411352 109 ntBASIC2.63□□□□□ -1.99
NEDD8-MDP1E9PL57 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC2.63□□□□□ -1.99
NEDD8-MDP1E9PL57 RAC1P6-201ENST00000423911 575 ntBASIC2.63□□□□□ -1.99
NEDD8-MDP1E9PL57 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.63□□□□□ -1.99
NEDD8-MDP1E9PL57 MYL8P-204ENST00000431574 518 ntBASIC2.63□□□□□ -1.99
NEDD8-MDP1E9PL57 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC2.63□□□□□ -1.99
NEDD8-MDP1E9PL57 AC119618.1-201ENST00000434191 222 ntBASIC2.63□□□□□ -1.99
NEDD8-MDP1E9PL57 AL353706.1-201ENST00000436728 494 ntBASIC2.63□□□□□ -1.99
NEDD8-MDP1E9PL57 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC2.63□□□□□ -1.99
NEDD8-MDP1E9PL57 AL714022.1-201ENST00000439897 151 ntBASIC2.63□□□□□ -1.99
NEDD8-MDP1E9PL57 AC244505.5-201ENST00000443639 207 ntBASIC2.63□□□□□ -1.99
NEDD8-MDP1E9PL57 MTND1P29-201ENST00000448112 647 ntBASIC2.63□□□□□ -1.99
NEDD8-MDP1E9PL57 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC2.63□□□□□ -1.99
NEDD8-MDP1E9PL57 AL122001.1-201ENST00000457027 370 ntBASIC2.63□□□□□ -1.99
NEDD8-MDP1E9PL57 AL031183.1-201ENST00000457667 207 ntBASIC2.63□□□□□ -1.99
NEDD8-MDP1E9PL57 RNU6-956P-201ENST00000458868 103 ntBASIC2.63□□□□□ -1.99
NEDD8-MDP1E9PL57 snoU13.28-201ENST00000459235 104 ntBASIC2.63□□□□□ -1.99
NEDD8-MDP1E9PL57 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC2.63□□□□□ -1.99
NEDD8-MDP1E9PL57 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC2.63□□□□□ -1.99
NEDD8-MDP1E9PL57 ARL2BPP4-201ENST00000506854 471 ntBASIC2.63□□□□□ -1.99
NEDD8-MDP1E9PL57 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
NEDD8-MDP1E9PL57 AC008413.1-201ENST00000511864 177 ntBASIC2.63□□□□□ -1.99
NEDD8-MDP1E9PL57 RN7SKP24-201ENST00000515888 284 ntBASIC2.63□□□□□ -1.99
NEDD8-MDP1E9PL57 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC2.63□□□□□ -1.99
NEDD8-MDP1E9PL57 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC2.63□□□□□ -1.99
NEDD8-MDP1E9PL57 ATP5F1P5-201ENST00000526403 760 ntBASIC2.63□□□□□ -1.99
NEDD8-MDP1E9PL57 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC2.63□□□□□ -1.99
NEDD8-MDP1E9PL57 AC011979.2-201ENST00000527568 352 ntBASIC2.63□□□□□ -1.99
NEDD8-MDP1E9PL57 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC2.63□□□□□ -1.99
NEDD8-MDP1E9PL57 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC2.63□□□□□ -1.99
NEDD8-MDP1E9PL57 MIR4528-201ENST00000577763 90 ntBASIC2.63□□□□□ -1.99
NEDD8-MDP1E9PL57 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC2.63□□□□□ -1.99
NEDD8-MDP1E9PL57 AC098826.3-201ENST00000603823 466 ntBASIC2.63□□□□□ -1.99
NEDD8-MDP1E9PL57 AC007363.1-201ENST00000604736 620 ntBASIC2.63□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 119.8 ms