Protein–RNA interactions for Protein: A5YKK6

CNOT1, CCR4-NOT transcription complex subunit 1, humanhuman

Known RBP Predictions only

Length 2,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1A5YKK6 RNU6-43P-201ENST00000384302 107 ntBASIC0.75□□□□□ -2.29
CNOT1A5YKK6 AC099677.1-201ENST00000420575 175 ntBASIC0.75□□□□□ -2.29
CNOT1A5YKK6 FAM206BP-201ENST00000510179 541 ntBASIC0.75□□□□□ -2.29
CNOT1A5YKK6 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC0.75□□□□□ -2.29
CNOT1A5YKK6 MIR5571-201ENST00000577998 113 ntBASIC0.75□□□□□ -2.29
CNOT1A5YKK6 CYP2C61P-201ENST00000604072 290 ntBASIC0.75□□□□□ -2.29
CNOT1A5YKK6 AC021749.1-201ENST00000604322 607 ntBASIC0.75□□□□□ -2.29
CNOT1A5YKK6 LINC02211-204ENST00000642024 1070 ntBASIC0.75□□□□□ -2.29
CNOT1A5YKK6 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC0.75□□□□□ -2.29
CNOT1A5YKK6 Y_RNA.488-201ENST00000384403 102 ntBASIC0.74□□□□□ -2.29
CNOT1A5YKK6 RNA5SP25-201ENST00000410815 110 ntBASIC0.74□□□□□ -2.29
CNOT1A5YKK6 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC0.74□□□□□ -2.29
CNOT1A5YKK6 SNRPGP6-201ENST00000451124 220 ntBASIC0.74□□□□□ -2.29
CNOT1A5YKK6 RPS20P10-201ENST00000451209 253 ntBASIC0.74□□□□□ -2.29
CNOT1A5YKK6 MTND4LP3-201ENST00000468320 276 ntBASIC0.74□□□□□ -2.29
CNOT1A5YKK6 AC018437.1-201ENST00000492214 406 ntBASIC0.74□□□□□ -2.29
CNOT1A5YKK6 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC0.74□□□□□ -2.29
CNOT1A5YKK6 AL133370.2-201ENST00000619934 439 ntBASIC0.74□□□□□ -2.29
CNOT1A5YKK6 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC0.74□□□□□ -2.29
CNOT1A5YKK6 SUCLA2P2-201ENST00000417269 1309 ntBASIC0.74□□□□□ -2.29
CNOT1A5YKK6 CBX3P1-201ENST00000325243 554 ntBASIC0.74□□□□□ -2.29
CNOT1A5YKK6 OR4G2P-201ENST00000328113 903 ntBASIC0.74□□□□□ -2.29
CNOT1A5YKK6 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC0.74□□□□□ -2.29
CNOT1A5YKK6 SNORD114-2-201ENST00000363953 78 ntBASIC0.74□□□□□ -2.29
CNOT1A5YKK6 MIR329-1-201ENST00000385028 80 ntBASIC0.74□□□□□ -2.29
CNOT1A5YKK6 MORN2-203ENST00000409131 544 ntTSL 5 BASIC0.74□□□□□ -2.29
CNOT1A5YKK6 RPS15AP40-201ENST00000419621 391 ntBASIC0.74□□□□□ -2.29
CNOT1A5YKK6 AC006548.1-201ENST00000427470 102 ntBASIC0.74□□□□□ -2.29
CNOT1A5YKK6 AC079780.1-201ENST00000428259 207 ntBASIC0.74□□□□□ -2.29
CNOT1A5YKK6 AC117454.1-201ENST00000491120 168 ntBASIC0.74□□□□□ -2.29
CNOT1A5YKK6 RPS27P26-201ENST00000494583 239 ntBASIC0.74□□□□□ -2.29
CNOT1A5YKK6 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC0.74□□□□□ -2.29
CNOT1A5YKK6 Y_RNA.700-201ENST00000516806 100 ntBASIC0.74□□□□□ -2.29
CNOT1A5YKK6 HSBP1P1-201ENST00000555205 166 ntBASIC0.74□□□□□ -2.29
CNOT1A5YKK6 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC0.74□□□□□ -2.29
CNOT1A5YKK6 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC0.74□□□□□ -2.29
CNOT1A5YKK6 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC0.74□□□□□ -2.29
CNOT1A5YKK6 AL773524.1-201ENST00000614065 229 ntBASIC0.74□□□□□ -2.29
CNOT1A5YKK6 CR381572.1-201ENST00000625098 102 ntBASIC0.74□□□□□ -2.29
CNOT1A5YKK6 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC0.74□□□□□ -2.29
CNOT1A5YKK6 AL442644.1-201ENST00000454390 3105 ntBASIC0.73□□□□□ -2.29
CNOT1A5YKK6 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC0.73□□□□□ -2.29
CNOT1A5YKK6 EDDM3CP-201ENST00000415977 425 ntBASIC0.73□□□□□ -2.29
CNOT1A5YKK6 RPL30P13-201ENST00000418873 348 ntBASIC0.73□□□□□ -2.29
CNOT1A5YKK6 RPL7L1P10-201ENST00000427790 463 ntBASIC0.73□□□□□ -2.29
CNOT1A5YKK6 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC0.73□□□□□ -2.29
CNOT1A5YKK6 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC0.73□□□□□ -2.29
CNOT1A5YKK6 AC121161.1-201ENST00000510606 652 ntBASIC0.73□□□□□ -2.29
CNOT1A5YKK6 AC091965.2-201ENST00000512324 613 ntBASIC0.73□□□□□ -2.29
CNOT1A5YKK6 RNU6-758P-201ENST00000516292 89 ntBASIC0.73□□□□□ -2.29
CNOT1A5YKK6 SNORA31.18-201ENST00000517043 134 ntBASIC0.73□□□□□ -2.29
CNOT1A5YKK6 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC0.73□□□□□ -2.29
CNOT1A5YKK6 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC0.73□□□□□ -2.29
CNOT1A5YKK6 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC0.73□□□□□ -2.29
CNOT1A5YKK6 AC106900.2-201ENST00000604994 317 ntBASIC0.73□□□□□ -2.29
CNOT1A5YKK6 AC025588.4-201ENST00000615802 908 ntBASIC0.73□□□□□ -2.29
CNOT1A5YKK6 uc_338.22-201ENST00000622722 187 ntBASIC0.73□□□□□ -2.29
CNOT1A5YKK6 AC027309.3-201ENST00000623419 351 ntBASIC0.73□□□□□ -2.29
CNOT1A5YKK6 U3.29-201ENST00000391296 212 ntBASIC0.72□□□□□ -2.29
CNOT1A5YKK6 HSPE1P24-201ENST00000450782 238 ntBASIC0.72□□□□□ -2.29
CNOT1A5YKK6 AC109992.2-201ENST00000460977 765 ntTSL 3 BASIC0.72□□□□□ -2.29
CNOT1A5YKK6 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC0.72□□□□□ -2.29
CNOT1A5YKK6 SNORA31.13-201ENST00000516624 135 ntBASIC0.72□□□□□ -2.29
CNOT1A5YKK6 AC084033.1-201ENST00000550830 633 ntBASIC0.72□□□□□ -2.29
CNOT1A5YKK6 AC133485.1-201ENST00000567176 124 ntBASIC0.72□□□□□ -2.29
CNOT1A5YKK6 AC138907.6-201ENST00000568401 126 ntBASIC0.72□□□□□ -2.29
CNOT1A5YKK6 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC0.72□□□□□ -2.29
CNOT1A5YKK6 OR1M4P-201ENST00000589199 287 ntBASIC0.72□□□□□ -2.29
CNOT1A5YKK6 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC0.72□□□□□ -2.29
CNOT1A5YKK6 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC0.72□□□□□ -2.29
CNOT1A5YKK6 RNA5SP499-201ENST00000363982 119 ntBASIC0.72□□□□□ -2.29
CNOT1A5YKK6 MIR518A2-201ENST00000384966 87 ntBASIC0.72□□□□□ -2.29
CNOT1A5YKK6 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC0.72□□□□□ -2.29
CNOT1A5YKK6 RNU6-837P-201ENST00000391056 108 ntBASIC0.72□□□□□ -2.29
CNOT1A5YKK6 MIR934-201ENST00000401241 83 ntBASIC0.72□□□□□ -2.29
CNOT1A5YKK6 RNU2-41P-201ENST00000410991 178 ntBASIC0.72□□□□□ -2.29
CNOT1A5YKK6 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC0.72□□□□□ -2.29
CNOT1A5YKK6 TRBV26OR9-2-201ENST00000432077 293 ntBASIC0.72□□□□□ -2.29
CNOT1A5YKK6 AL022238.1-201ENST00000442557 355 ntBASIC0.72□□□□□ -2.29
CNOT1A5YKK6 PTENP1-201ENST00000447117 1215 ntBASIC0.72□□□□□ -2.29
CNOT1A5YKK6 Z82190.1-201ENST00000454534 490 ntBASIC0.72□□□□□ -2.29
CNOT1A5YKK6 PCNAP1-201ENST00000505363 709 ntBASIC0.72□□□□□ -2.29
CNOT1A5YKK6 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC0.72□□□□□ -2.29
CNOT1A5YKK6 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC0.72□□□□□ -2.29
CNOT1A5YKK6 MED28P6-201ENST00000558776 231 ntBASIC0.72□□□□□ -2.29
CNOT1A5YKK6 AL450336.1-201ENST00000605180 586 ntBASIC0.72□□□□□ -2.29
CNOT1A5YKK6 AL118508.4-201ENST00000624142 1176 ntBASIC0.72□□□□□ -2.29
CNOT1A5YKK6 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC0.72□□□□□ -2.29
CNOT1A5YKK6 RNU6-263P-201ENST00000363811 107 ntBASIC0.71□□□□□ -2.3
CNOT1A5YKK6 MTCO3P12-201ENST00000416718 547 ntBASIC0.71□□□□□ -2.3
CNOT1A5YKK6 EIF4EP4-201ENST00000424916 578 ntBASIC0.71□□□□□ -2.3
CNOT1A5YKK6 TRBVB-201ENST00000477100 408 ntBASIC0.71□□□□□ -2.3
CNOT1A5YKK6 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC0.71□□□□□ -2.3
CNOT1A5YKK6 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC0.71□□□□□ -2.3
CNOT1A5YKK6 DUXAP10-204ENST00000612052 616 ntBASIC0.71□□□□□ -2.3
CNOT1A5YKK6 MIR6866-201ENST00000638146 69 ntBASIC0.71□□□□□ -2.3
CNOT1A5YKK6 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC0.71□□□□□ -2.3
CNOT1A5YKK6 AL031663.1-201ENST00000437445 219 ntBASIC0.71□□□□□ -2.3
CNOT1A5YKK6 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC0.71□□□□□ -2.3
CNOT1A5YKK6 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC0.71□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 126.6 ms