Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC3.3□□□□□ -1.88
TCRBV7S3A2A0A539 Y_RNA.702-201ENST00000516843 96 ntBASIC3.3□□□□□ -1.88
TCRBV7S3A2A0A539 RNA5SP291-201ENST00000517222 105 ntBASIC3.3□□□□□ -1.88
TCRBV7S3A2A0A539 AP001804.3-201ENST00000525146 880 ntBASIC3.3□□□□□ -1.88
TCRBV7S3A2A0A539 ZNF192P1-203ENST00000565888 810 ntBASIC3.3□□□□□ -1.88
TCRBV7S3A2A0A539 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC3.3□□□□□ -1.88
TCRBV7S3A2A0A539 UBE2Q2P6-201ENST00000612666 153 ntBASIC3.3□□□□□ -1.88
TCRBV7S3A2A0A539 AC025253.1-201ENST00000613623 543 ntBASIC3.3□□□□□ -1.88
TCRBV7S3A2A0A539 AC022306.2-201ENST00000617563 647 ntBASIC3.3□□□□□ -1.88
TCRBV7S3A2A0A539 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
TCRBV7S3A2A0A539 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC3.3□□□□□ -1.88
TCRBV7S3A2A0A539 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
TCRBV7S3A2A0A539 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC3.29□□□□□ -1.88
TCRBV7S3A2A0A539 RNU6-512P-201ENST00000364438 103 ntBASIC3.29□□□□□ -1.88
TCRBV7S3A2A0A539 RNA5SP111-201ENST00000411386 101 ntBASIC3.29□□□□□ -1.88
TCRBV7S3A2A0A539 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC3.29□□□□□ -1.88
TCRBV7S3A2A0A539 AC098614.3-201ENST00000438957 440 ntBASIC3.29□□□□□ -1.88
TCRBV7S3A2A0A539 Z82210.1-201ENST00000440037 231 ntBASIC3.29□□□□□ -1.88
TCRBV7S3A2A0A539 RPS15AP27-201ENST00000449183 343 ntBASIC3.29□□□□□ -1.88
TCRBV7S3A2A0A539 SCARNA18-201ENST00000459004 134 ntBASIC3.29□□□□□ -1.88
TCRBV7S3A2A0A539 AC008155.2-201ENST00000464337 397 ntBASIC3.29□□□□□ -1.88
TCRBV7S3A2A0A539 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC3.29□□□□□ -1.88
TCRBV7S3A2A0A539 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC3.29□□□□□ -1.88
TCRBV7S3A2A0A539 AC104136.1-201ENST00000512969 394 ntBASIC3.29□□□□□ -1.88
TCRBV7S3A2A0A539 FTH1P9-201ENST00000513251 355 ntBASIC3.29□□□□□ -1.88
TCRBV7S3A2A0A539 AC025465.4-201ENST00000513422 638 ntBASIC3.29□□□□□ -1.88
TCRBV7S3A2A0A539 RNA5SP217-201ENST00000515959 91 ntBASIC3.29□□□□□ -1.88
TCRBV7S3A2A0A539 RNU6-1282P-201ENST00000516735 96 ntBASIC3.29□□□□□ -1.88
TCRBV7S3A2A0A539 AC023632.4-201ENST00000517783 191 ntBASIC3.29□□□□□ -1.88
TCRBV7S3A2A0A539 AC023050.3-201ENST00000541142 333 ntBASIC3.29□□□□□ -1.88
TCRBV7S3A2A0A539 MIR5583-1-201ENST00000580941 59 ntBASIC3.29□□□□□ -1.88
TCRBV7S3A2A0A539 MIR4276-201ENST00000584832 70 ntBASIC3.29□□□□□ -1.88
TCRBV7S3A2A0A539 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
TCRBV7S3A2A0A539 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC3.29□□□□□ -1.88
TCRBV7S3A2A0A539 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC3.29□□□□□ -1.88
TCRBV7S3A2A0A539 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.29□□□□□ -1.88
TCRBV7S3A2A0A539 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.29□□□□□ -1.88
TCRBV7S3A2A0A539 AL359693.1-201ENST00000614959 2407 ntBASIC3.29□□□□□ -1.88
TCRBV7S3A2A0A539 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
TCRBV7S3A2A0A539 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.28□□□□□ -1.88
TCRBV7S3A2A0A539 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC3.28□□□□□ -1.88
TCRBV7S3A2A0A539 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.28□□□□□ -1.88
TCRBV7S3A2A0A539 U3.6-201ENST00000363622 211 ntBASIC3.28□□□□□ -1.88
TCRBV7S3A2A0A539 Y_RNA.167-201ENST00000363735 109 ntBASIC3.28□□□□□ -1.88
TCRBV7S3A2A0A539 RNU6-371P-201ENST00000364283 108 ntBASIC3.28□□□□□ -1.88
TCRBV7S3A2A0A539 Y_RNA.245-201ENST00000364493 95 ntBASIC3.28□□□□□ -1.88
TCRBV7S3A2A0A539 SNORA4.3-201ENST00000365564 137 ntBASIC3.28□□□□□ -1.88
TCRBV7S3A2A0A539 MIR301A-201ENST00000385261 86 ntBASIC3.28□□□□□ -1.88
TCRBV7S3A2A0A539 RNU4-26P-201ENST00000410270 107 ntBASIC3.28□□□□□ -1.88
TCRBV7S3A2A0A539 RPS29P4-201ENST00000414733 161 ntBASIC3.28□□□□□ -1.88
TCRBV7S3A2A0A539 BTF3L4P3-201ENST00000418879 476 ntBASIC3.28□□□□□ -1.88
TCRBV7S3A2A0A539 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC3.28□□□□□ -1.88
TCRBV7S3A2A0A539 AC012498.1-201ENST00000424037 437 ntBASIC3.28□□□□□ -1.88
TCRBV7S3A2A0A539 AL513185.2-201ENST00000425543 193 ntBASIC3.28□□□□□ -1.88
TCRBV7S3A2A0A539 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.28□□□□□ -1.88
TCRBV7S3A2A0A539 AL669831.1-202ENST00000428504 417 ntBASIC3.28□□□□□ -1.88
TCRBV7S3A2A0A539 AL592045.1-201ENST00000429867 352 ntBASIC3.28□□□□□ -1.88
TCRBV7S3A2A0A539 HMGN2P31-201ENST00000432430 273 ntBASIC3.28□□□□□ -1.88
TCRBV7S3A2A0A539 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC3.28□□□□□ -1.88
TCRBV7S3A2A0A539 GTF2IP13-201ENST00000438487 386 ntBASIC3.28□□□□□ -1.88
TCRBV7S3A2A0A539 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC3.28□□□□□ -1.88
TCRBV7S3A2A0A539 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC3.28□□□□□ -1.88
TCRBV7S3A2A0A539 PMCHL2-203ENST00000457791 237 ntBASIC3.28□□□□□ -1.88
TCRBV7S3A2A0A539 RNU6-1208P-201ENST00000459588 107 ntBASIC3.28□□□□□ -1.88
TCRBV7S3A2A0A539 RPS27P29-201ENST00000463110 252 ntBASIC3.28□□□□□ -1.88
TCRBV7S3A2A0A539 RPS15AP34-201ENST00000487776 387 ntBASIC3.28□□□□□ -1.88
TCRBV7S3A2A0A539 HMGN1P12-201ENST00000499125 195 ntBASIC3.28□□□□□ -1.88
TCRBV7S3A2A0A539 SUMO2P6-201ENST00000505273 288 ntBASIC3.28□□□□□ -1.88
TCRBV7S3A2A0A539 Y_RNA.665-201ENST00000516177 98 ntBASIC3.28□□□□□ -1.88
TCRBV7S3A2A0A539 RNU6-143P-201ENST00000516942 93 ntBASIC3.28□□□□□ -1.88
TCRBV7S3A2A0A539 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC3.28□□□□□ -1.88
TCRBV7S3A2A0A539 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC3.28□□□□□ -1.88
TCRBV7S3A2A0A539 OR11H5P-201ENST00000554039 926 ntBASIC3.28□□□□□ -1.88
TCRBV7S3A2A0A539 AL118558.2-201ENST00000556294 238 ntBASIC3.28□□□□□ -1.88
TCRBV7S3A2A0A539 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC3.28□□□□□ -1.88
TCRBV7S3A2A0A539 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC3.28□□□□□ -1.88
TCRBV7S3A2A0A539 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.28□□□□□ -1.88
TCRBV7S3A2A0A539 AC037471.2-201ENST00000564941 598 ntBASIC3.28□□□□□ -1.88
TCRBV7S3A2A0A539 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.28□□□□□ -1.88
TCRBV7S3A2A0A539 MIR2682-201ENST00000580305 110 ntBASIC3.28□□□□□ -1.88
TCRBV7S3A2A0A539 AC005730.3-201ENST00000583067 366 ntBASIC3.28□□□□□ -1.88
TCRBV7S3A2A0A539 LARP7P1-201ENST00000605576 316 ntBASIC3.28□□□□□ -1.88
TCRBV7S3A2A0A539 VPS8-228ENST00000628962 207 ntTSL 5 BASIC3.28□□□□□ -1.88
TCRBV7S3A2A0A539 AC121333.1-201ENST00000567488 2709 ntBASIC3.28□□□□□ -1.88
TCRBV7S3A2A0A539 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
TCRBV7S3A2A0A539 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
TCRBV7S3A2A0A539 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
TCRBV7S3A2A0A539 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
TCRBV7S3A2A0A539 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
TCRBV7S3A2A0A539 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.27□□□□□ -1.89
TCRBV7S3A2A0A539 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
TCRBV7S3A2A0A539 AL049641.1-201ENST00000441055 1948 ntBASIC3.27□□□□□ -1.89
TCRBV7S3A2A0A539 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC3.27□□□□□ -1.89
TCRBV7S3A2A0A539 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.27□□□□□ -1.89
TCRBV7S3A2A0A539 CBX3P1-201ENST00000325243 554 ntBASIC3.27□□□□□ -1.89
TCRBV7S3A2A0A539 Y_RNA.100-201ENST00000363141 102 ntBASIC3.27□□□□□ -1.89
TCRBV7S3A2A0A539 RNU1-64P-201ENST00000365443 163 ntBASIC3.27□□□□□ -1.89
TCRBV7S3A2A0A539 AL078595.1-201ENST00000404458 226 ntBASIC3.27□□□□□ -1.89
TCRBV7S3A2A0A539 AL445189.1-201ENST00000405722 338 ntBASIC3.27□□□□□ -1.89
TCRBV7S3A2A0A539 AL162578.1-201ENST00000406202 378 ntBASIC3.27□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 103.7 ms