Protein–RNA interactions for Protein: Q9Y6N9

USH1C, Harmonin, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH1CQ9Y6N9 RNU6-223P-201ENST00000362830 107 ntBASIC1.83□□□□□ -2.12
USH1CQ9Y6N9 SNORD48-201ENST00000364953 64 ntBASIC1.83□□□□□ -2.12
USH1CQ9Y6N9 RNU6-224P-201ENST00000384055 107 ntBASIC1.83□□□□□ -2.12
USH1CQ9Y6N9 SNORA67.3-201ENST00000384366 140 ntBASIC1.83□□□□□ -2.12
USH1CQ9Y6N9 SNORA64-201ENST00000384674 134 ntBASIC1.83□□□□□ -2.12
USH1CQ9Y6N9 RNU6-253P-201ENST00000384730 105 ntBASIC1.83□□□□□ -2.12
USH1CQ9Y6N9 RN7SKP32-201ENST00000410167 303 ntBASIC1.83□□□□□ -2.12
USH1CQ9Y6N9 RNU2-2P-201ENST00000410396 191 ntBASIC1.83□□□□□ -2.12
USH1CQ9Y6N9 RPL26P27-201ENST00000414397 437 ntBASIC1.83□□□□□ -2.12
USH1CQ9Y6N9 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC1.83□□□□□ -2.12
USH1CQ9Y6N9 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC1.83□□□□□ -2.12
USH1CQ9Y6N9 MTND4P3-201ENST00000417829 541 ntBASIC1.83□□□□□ -2.12
USH1CQ9Y6N9 USP9YP21-201ENST00000420603 432 ntBASIC1.83□□□□□ -2.12
USH1CQ9Y6N9 AC003685.2-201ENST00000422795 395 ntBASIC1.83□□□□□ -2.12
USH1CQ9Y6N9 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC1.83□□□□□ -2.12
USH1CQ9Y6N9 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC1.83□□□□□ -2.12
USH1CQ9Y6N9 AC096638.1-201ENST00000444678 216 ntBASIC1.83□□□□□ -2.12
USH1CQ9Y6N9 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC1.83□□□□□ -2.12
USH1CQ9Y6N9 AC055731.1-201ENST00000474387 401 ntBASIC1.83□□□□□ -2.12
USH1CQ9Y6N9 AC104563.1-201ENST00000476147 376 ntBASIC1.83□□□□□ -2.12
USH1CQ9Y6N9 AC092436.1-201ENST00000506450 503 ntBASIC1.83□□□□□ -2.12
USH1CQ9Y6N9 MTND5P13-201ENST00000513046 1079 ntBASIC1.83□□□□□ -2.12
USH1CQ9Y6N9 RNA5SP165-201ENST00000517142 115 ntBASIC1.83□□□□□ -2.12
USH1CQ9Y6N9 SNORA31.23-201ENST00000517219 133 ntBASIC1.83□□□□□ -2.12
USH1CQ9Y6N9 AL136520.1-202ENST00000555494 763 ntBASIC1.83□□□□□ -2.12
USH1CQ9Y6N9 AC021739.1-201ENST00000559631 174 ntBASIC1.83□□□□□ -2.12
USH1CQ9Y6N9 AL132657.2-201ENST00000564417 358 ntBASIC1.83□□□□□ -2.12
USH1CQ9Y6N9 MIR4419B-201ENST00000577260 68 ntBASIC1.83□□□□□ -2.12
USH1CQ9Y6N9 AC010928.2-201ENST00000588017 287 ntBASIC1.83□□□□□ -2.12
USH1CQ9Y6N9 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC1.83□□□□□ -2.12
USH1CQ9Y6N9 AP002802.2-201ENST00000605877 235 ntBASIC1.83□□□□□ -2.12
USH1CQ9Y6N9 U2.15-201ENST00000611544 191 ntBASIC1.83□□□□□ -2.12
USH1CQ9Y6N9 U2.16-201ENST00000613119 191 ntBASIC1.83□□□□□ -2.12
USH1CQ9Y6N9 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC1.83□□□□□ -2.12
USH1CQ9Y6N9 U2.12-201ENST00000613778 191 ntBASIC1.83□□□□□ -2.12
USH1CQ9Y6N9 U2.20-201ENST00000613956 192 ntBASIC1.83□□□□□ -2.12
USH1CQ9Y6N9 U2.9-201ENST00000615427 191 ntBASIC1.83□□□□□ -2.12
USH1CQ9Y6N9 U2.11-201ENST00000616345 191 ntBASIC1.83□□□□□ -2.12
USH1CQ9Y6N9 U2.2-201ENST00000616535 191 ntBASIC1.83□□□□□ -2.12
USH1CQ9Y6N9 U2.3-201ENST00000617785 191 ntBASIC1.83□□□□□ -2.12
USH1CQ9Y6N9 AL512427.1-201ENST00000618593 349 ntBASIC1.83□□□□□ -2.12
USH1CQ9Y6N9 U2.19-201ENST00000618602 191 ntBASIC1.83□□□□□ -2.12
USH1CQ9Y6N9 RNU2-1-201ENST00000618664 191 ntBASIC1.83□□□□□ -2.12
USH1CQ9Y6N9 U2.6-201ENST00000619225 191 ntBASIC1.83□□□□□ -2.12
USH1CQ9Y6N9 U2.5-201ENST00000619465 191 ntBASIC1.83□□□□□ -2.12
USH1CQ9Y6N9 U2.10-201ENST00000620268 191 ntBASIC1.83□□□□□ -2.12
USH1CQ9Y6N9 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC1.83□□□□□ -2.12
USH1CQ9Y6N9 AL390862.1-201ENST00000635467 1469 ntBASIC1.82□□□□□ -2.12
USH1CQ9Y6N9 ATP8A2P3-201ENST00000426792 1536 ntBASIC1.82□□□□□ -2.12
USH1CQ9Y6N9 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
USH1CQ9Y6N9 RNA5SP363-201ENST00000365072 115 ntBASIC1.82□□□□□ -2.12
USH1CQ9Y6N9 RNU1-148P-201ENST00000384472 162 ntBASIC1.82□□□□□ -2.12
USH1CQ9Y6N9 AL590084.1-201ENST00000407885 387 ntBASIC1.82□□□□□ -2.12
USH1CQ9Y6N9 RNU2-68P-201ENST00000410878 191 ntBASIC1.82□□□□□ -2.12
USH1CQ9Y6N9 TIMM9P2-201ENST00000419324 266 ntBASIC1.82□□□□□ -2.12
USH1CQ9Y6N9 RPS3AP44-201ENST00000425466 790 ntBASIC1.82□□□□□ -2.12
USH1CQ9Y6N9 AL445646.1-201ENST00000431784 216 ntBASIC1.82□□□□□ -2.12
USH1CQ9Y6N9 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC1.82□□□□□ -2.12
USH1CQ9Y6N9 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC1.82□□□□□ -2.12
USH1CQ9Y6N9 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC1.82□□□□□ -2.12
USH1CQ9Y6N9 MTCO3P45-201ENST00000443036 613 ntBASIC1.82□□□□□ -2.12
USH1CQ9Y6N9 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC1.82□□□□□ -2.12
USH1CQ9Y6N9 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC1.82□□□□□ -2.12
USH1CQ9Y6N9 AC013267.1-201ENST00000458227 267 ntBASIC1.82□□□□□ -2.12
USH1CQ9Y6N9 HMGB1P36-201ENST00000487709 576 ntBASIC1.82□□□□□ -2.12
USH1CQ9Y6N9 AC034222.1-201ENST00000494052 532 ntBASIC1.82□□□□□ -2.12
USH1CQ9Y6N9 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC1.82□□□□□ -2.12
USH1CQ9Y6N9 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC1.82□□□□□ -2.12
USH1CQ9Y6N9 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC1.82□□□□□ -2.12
USH1CQ9Y6N9 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
USH1CQ9Y6N9 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC1.82□□□□□ -2.12
USH1CQ9Y6N9 RNU6-927P-201ENST00000516199 100 ntBASIC1.82□□□□□ -2.12
USH1CQ9Y6N9 SNORD19.2-201ENST00000516978 73 ntBASIC1.82□□□□□ -2.12
USH1CQ9Y6N9 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC1.82□□□□□ -2.12
USH1CQ9Y6N9 AC118273.2-201ENST00000532092 465 ntBASIC1.82□□□□□ -2.12
USH1CQ9Y6N9 CYCSP2-201ENST00000558168 301 ntBASIC1.82□□□□□ -2.12
USH1CQ9Y6N9 AL512347.1-201ENST00000566420 503 ntBASIC1.82□□□□□ -2.12
USH1CQ9Y6N9 AL627230.6-201ENST00000611129 280 ntBASIC1.82□□□□□ -2.12
USH1CQ9Y6N9 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC1.82□□□□□ -2.12
USH1CQ9Y6N9 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
USH1CQ9Y6N9 AC104985.3-201ENST00000623479 597 ntBASIC1.82□□□□□ -2.12
USH1CQ9Y6N9 AC244517.12-201ENST00000623581 663 ntBASIC1.82□□□□□ -2.12
USH1CQ9Y6N9 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC1.82□□□□□ -2.12
USH1CQ9Y6N9 MIR219B-201ENST00000637023 88 ntBASIC1.82□□□□□ -2.12
USH1CQ9Y6N9 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC1.82□□□□□ -2.12
USH1CQ9Y6N9 HSPA8P4-201ENST00000511877 1920 ntBASIC1.81□□□□□ -2.12
USH1CQ9Y6N9 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
USH1CQ9Y6N9 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
USH1CQ9Y6N9 Y_RNA.110-201ENST00000363220 99 ntBASIC1.81□□□□□ -2.12
USH1CQ9Y6N9 RNU6-744P-201ENST00000365557 107 ntBASIC1.81□□□□□ -2.12
USH1CQ9Y6N9 RNU6-1316P-201ENST00000384242 108 ntBASIC1.81□□□□□ -2.12
USH1CQ9Y6N9 U6atac.2-201ENST00000408644 118 ntBASIC1.81□□□□□ -2.12
USH1CQ9Y6N9 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC1.81□□□□□ -2.12
USH1CQ9Y6N9 AL161651.1-201ENST00000440882 223 ntBASIC1.81□□□□□ -2.12
USH1CQ9Y6N9 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC1.81□□□□□ -2.12
USH1CQ9Y6N9 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC1.81□□□□□ -2.12
USH1CQ9Y6N9 FDX1P2-201ENST00000450769 375 ntBASIC1.81□□□□□ -2.12
USH1CQ9Y6N9 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC1.81□□□□□ -2.12
USH1CQ9Y6N9 RPL7P18-201ENST00000478965 734 ntBASIC1.81□□□□□ -2.12
USH1CQ9Y6N9 AC026801.1-201ENST00000497178 464 ntBASIC1.81□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 150.3 ms