Protein–RNA interactions for Protein: Q9Y5Q9

GTF3C3, General transcription factor 3C polypeptide 3, humanhuman

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3Q9Y5Q9 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC5.64□□□□□ -1.51
GTF3C3Q9Y5Q9 AC096649.2-201ENST00000416186 393 ntBASIC5.64□□□□□ -1.51
GTF3C3Q9Y5Q9 FGF12-202ENST00000430714 603 ntTSL 2 BASIC5.64□□□□□ -1.51
GTF3C3Q9Y5Q9 DAP3P1-201ENST00000441522 278 ntBASIC5.64□□□□□ -1.51
GTF3C3Q9Y5Q9 RPL31P15-201ENST00000449770 338 ntBASIC5.64□□□□□ -1.51
GTF3C3Q9Y5Q9 RPL35AP15-201ENST00000468042 339 ntBASIC5.64□□□□□ -1.51
GTF3C3Q9Y5Q9 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC5.64□□□□□ -1.51
GTF3C3Q9Y5Q9 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC5.64□□□□□ -1.51
GTF3C3Q9Y5Q9 MTCYBP40-201ENST00000509390 1135 ntBASIC5.64□□□□□ -1.51
GTF3C3Q9Y5Q9 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC5.64□□□□□ -1.51
GTF3C3Q9Y5Q9 TRAV32-201ENST00000553993 340 ntBASIC5.64□□□□□ -1.51
GTF3C3Q9Y5Q9 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC5.64□□□□□ -1.51
GTF3C3Q9Y5Q9 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC5.64□□□□□ -1.51
GTF3C3Q9Y5Q9 AL050343.2-201ENST00000607338 280 ntBASIC5.64□□□□□ -1.51
GTF3C3Q9Y5Q9 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC5.64□□□□□ -1.51
GTF3C3Q9Y5Q9 RNU6ATAC35P-201ENST00000609276 444 ntBASIC5.64□□□□□ -1.51
GTF3C3Q9Y5Q9 AL160413.1-201ENST00000622780 310 ntBASIC5.64□□□□□ -1.51
GTF3C3Q9Y5Q9 POU2F2-219ENST00000625670 371 ntTSL 5 BASIC5.64□□□□□ -1.51
GTF3C3Q9Y5Q9 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
GTF3C3Q9Y5Q9 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC5.63□□□□□ -1.51
GTF3C3Q9Y5Q9 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
GTF3C3Q9Y5Q9 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
GTF3C3Q9Y5Q9 RNU6-942P-201ENST00000363002 107 ntBASIC5.63□□□□□ -1.51
GTF3C3Q9Y5Q9 Y_RNA.151-201ENST00000363566 112 ntBASIC5.63□□□□□ -1.51
GTF3C3Q9Y5Q9 RNU1-64P-201ENST00000365443 163 ntBASIC5.63□□□□□ -1.51
GTF3C3Q9Y5Q9 RNU4-14P-201ENST00000410858 122 ntBASIC5.63□□□□□ -1.51
GTF3C3Q9Y5Q9 RPS12P10-201ENST00000427031 377 ntBASIC5.63□□□□□ -1.51
GTF3C3Q9Y5Q9 AC017083.1-201ENST00000428093 483 ntBASIC5.63□□□□□ -1.51
GTF3C3Q9Y5Q9 AL358472.1-201ENST00000431295 329 ntBASIC5.63□□□□□ -1.51
GTF3C3Q9Y5Q9 AL161651.1-201ENST00000440882 223 ntBASIC5.63□□□□□ -1.51
GTF3C3Q9Y5Q9 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC5.63□□□□□ -1.51
GTF3C3Q9Y5Q9 Y_RNA.653-201ENST00000459091 95 ntBASIC5.63□□□□□ -1.51
GTF3C3Q9Y5Q9 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC5.63□□□□□ -1.51
GTF3C3Q9Y5Q9 ACA59.1-201ENST00000515966 143 ntBASIC5.63□□□□□ -1.51
GTF3C3Q9Y5Q9 RNU6-581P-201ENST00000516214 105 ntBASIC5.63□□□□□ -1.51
GTF3C3Q9Y5Q9 Y_RNA.718-201ENST00000517110 102 ntBASIC5.63□□□□□ -1.51
GTF3C3Q9Y5Q9 AC005476.1-201ENST00000554427 397 ntBASIC5.63□□□□□ -1.51
GTF3C3Q9Y5Q9 AC103996.1-201ENST00000555468 102 ntBASIC5.63□□□□□ -1.51
GTF3C3Q9Y5Q9 AC020895.1-201ENST00000595362 272 ntBASIC5.63□□□□□ -1.51
GTF3C3Q9Y5Q9 AC009314.1-201ENST00000603871 304 ntBASIC5.63□□□□□ -1.51
GTF3C3Q9Y5Q9 AC018462.2-201ENST00000605375 395 ntBASIC5.63□□□□□ -1.51
GTF3C3Q9Y5Q9 AL133255.1-201ENST00000606374 441 ntBASIC5.63□□□□□ -1.51
GTF3C3Q9Y5Q9 AL133215.3-201ENST00000609801 448 ntBASIC5.63□□□□□ -1.51
GTF3C3Q9Y5Q9 AC011890.2-201ENST00000613393 294 ntBASIC5.63□□□□□ -1.51
GTF3C3Q9Y5Q9 AC084781.2-201ENST00000615568 161 ntBASIC5.63□□□□□ -1.51
GTF3C3Q9Y5Q9 MIR7702-201ENST00000621931 59 ntBASIC5.63□□□□□ -1.51
GTF3C3Q9Y5Q9 MIR3529-201ENST00000637713 78 ntBASIC5.63□□□□□ -1.51
GTF3C3Q9Y5Q9 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
GTF3C3Q9Y5Q9 MTND4P23-201ENST00000447723 1363 ntBASIC5.63□□□□□ -1.51
GTF3C3Q9Y5Q9 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
GTF3C3Q9Y5Q9 ZNF736P3Y-201ENST00000428264 1465 ntBASIC5.63□□□□□ -1.51
GTF3C3Q9Y5Q9 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
GTF3C3Q9Y5Q9 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
GTF3C3Q9Y5Q9 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC5.62□□□□□ -1.51
GTF3C3Q9Y5Q9 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
GTF3C3Q9Y5Q9 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
GTF3C3Q9Y5Q9 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
GTF3C3Q9Y5Q9 RNA5SP183-201ENST00000362452 119 ntBASIC5.62□□□□□ -1.51
GTF3C3Q9Y5Q9 Y_RNA.813-201ENST00000364639 102 ntBASIC5.62□□□□□ -1.51
GTF3C3Q9Y5Q9 RNU6-325P-201ENST00000411132 105 ntBASIC5.62□□□□□ -1.51
GTF3C3Q9Y5Q9 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC5.62□□□□□ -1.51
GTF3C3Q9Y5Q9 RPS5P7-201ENST00000456664 608 ntBASIC5.62□□□□□ -1.51
GTF3C3Q9Y5Q9 SNORD5.1-201ENST00000458800 75 ntBASIC5.62□□□□□ -1.51
GTF3C3Q9Y5Q9 RPS3AP41-201ENST00000462701 778 ntBASIC5.62□□□□□ -1.51
GTF3C3Q9Y5Q9 AC133134.1-201ENST00000466800 359 ntBASIC5.62□□□□□ -1.51
GTF3C3Q9Y5Q9 AC008571.1-201ENST00000467232 300 ntBASIC5.62□□□□□ -1.51
GTF3C3Q9Y5Q9 AC002456.2-201ENST00000509356 380 ntBASIC5.62□□□□□ -1.51
GTF3C3Q9Y5Q9 BTF3P13-201ENST00000513224 490 ntBASIC5.62□□□□□ -1.51
GTF3C3Q9Y5Q9 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC5.62□□□□□ -1.51
GTF3C3Q9Y5Q9 OR5D15P-201ENST00000531671 942 ntBASIC5.62□□□□□ -1.51
GTF3C3Q9Y5Q9 AC135507.2-201ENST00000612443 309 ntBASIC5.62□□□□□ -1.51
GTF3C3Q9Y5Q9 U3.53-201ENST00000628922 216 ntBASIC5.62□□□□□ -1.51
GTF3C3Q9Y5Q9 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC5.62□□□□□ -1.51
GTF3C3Q9Y5Q9 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
GTF3C3Q9Y5Q9 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC5.62□□□□□ -1.51
GTF3C3Q9Y5Q9 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
GTF3C3Q9Y5Q9 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
GTF3C3Q9Y5Q9 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
GTF3C3Q9Y5Q9 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC5.61□□□□□ -1.51
GTF3C3Q9Y5Q9 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
GTF3C3Q9Y5Q9 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
GTF3C3Q9Y5Q9 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
GTF3C3Q9Y5Q9 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
GTF3C3Q9Y5Q9 RPS29P13-201ENST00000402041 169 ntBASIC5.61□□□□□ -1.51
GTF3C3Q9Y5Q9 MTHFD2P2-201ENST00000407725 247 ntBASIC5.61□□□□□ -1.51
GTF3C3Q9Y5Q9 RNU6-1050P-201ENST00000410388 107 ntBASIC5.61□□□□□ -1.51
GTF3C3Q9Y5Q9 AC023141.4-201ENST00000412031 328 ntBASIC5.61□□□□□ -1.51
GTF3C3Q9Y5Q9 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC5.61□□□□□ -1.51
GTF3C3Q9Y5Q9 RPL23AP93-201ENST00000440847 484 ntBASIC5.61□□□□□ -1.51
GTF3C3Q9Y5Q9 HMGN1P2-201ENST00000445197 310 ntBASIC5.61□□□□□ -1.51
GTF3C3Q9Y5Q9 MRPL42P6-201ENST00000486397 371 ntBASIC5.61□□□□□ -1.51
GTF3C3Q9Y5Q9 SCARNA22-201ENST00000503991 125 ntBASIC5.61□□□□□ -1.51
GTF3C3Q9Y5Q9 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC5.61□□□□□ -1.51
GTF3C3Q9Y5Q9 RNU6-1170P-201ENST00000515974 106 ntBASIC5.61□□□□□ -1.51
GTF3C3Q9Y5Q9 RNU6-307P-201ENST00000516743 106 ntBASIC5.61□□□□□ -1.51
GTF3C3Q9Y5Q9 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC5.61□□□□□ -1.51
GTF3C3Q9Y5Q9 TRAV8-5-201ENST00000537369 341 ntBASIC5.61□□□□□ -1.51
GTF3C3Q9Y5Q9 AC009163.5-201ENST00000575421 637 ntBASIC5.61□□□□□ -1.51
GTF3C3Q9Y5Q9 CPDP1-201ENST00000579660 283 ntBASIC5.61□□□□□ -1.51
GTF3C3Q9Y5Q9 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC5.61□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 129.7 ms