Protein–RNA interactions for Protein: Q9Y5H8

PCDHA3, Protocadherin alpha-3, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3Q9Y5H8 SNORD113-7-201ENST00000363762 77 ntBASIC3.79□□□□□ -1.8
PCDHA3Q9Y5H8 RNU1-64P-201ENST00000365443 163 ntBASIC3.79□□□□□ -1.8
PCDHA3Q9Y5H8 MIR184-201ENST00000384962 84 ntBASIC3.79□□□□□ -1.8
PCDHA3Q9Y5H8 MIR493-201ENST00000385254 89 ntBASIC3.79□□□□□ -1.8
PCDHA3Q9Y5H8 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
PCDHA3Q9Y5H8 RNU6-328P-201ENST00000390887 106 ntBASIC3.79□□□□□ -1.8
PCDHA3Q9Y5H8 RNA5SP219-201ENST00000390940 113 ntBASIC3.79□□□□□ -1.8
PCDHA3Q9Y5H8 PPIAP31-201ENST00000405422 495 ntBASIC3.79□□□□□ -1.8
PCDHA3Q9Y5H8 U3.39-201ENST00000408569 239 ntBASIC3.79□□□□□ -1.8
PCDHA3Q9Y5H8 AC063979.1-201ENST00000415539 377 ntBASIC3.79□□□□□ -1.8
PCDHA3Q9Y5H8 GPM6BP2-201ENST00000432046 144 ntBASIC3.79□□□□□ -1.8
PCDHA3Q9Y5H8 GPM6BP1-201ENST00000446387 144 ntBASIC3.79□□□□□ -1.8
PCDHA3Q9Y5H8 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC3.79□□□□□ -1.8
PCDHA3Q9Y5H8 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC3.79□□□□□ -1.8
PCDHA3Q9Y5H8 CEACAMP4-201ENST00000457676 421 ntBASIC3.79□□□□□ -1.8
PCDHA3Q9Y5H8 AL133162.1-201ENST00000463228 453 ntBASIC3.79□□□□□ -1.8
PCDHA3Q9Y5H8 RPL9P32-201ENST00000464118 620 ntBASIC3.79□□□□□ -1.8
PCDHA3Q9Y5H8 RPL30P5-201ENST00000494923 336 ntBASIC3.79□□□□□ -1.8
PCDHA3Q9Y5H8 RPL7P47-201ENST00000497299 556 ntBASIC3.79□□□□□ -1.8
PCDHA3Q9Y5H8 TRBVA-201ENST00000498804 316 ntBASIC3.79□□□□□ -1.8
PCDHA3Q9Y5H8 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC3.79□□□□□ -1.8
PCDHA3Q9Y5H8 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC3.79□□□□□ -1.8
PCDHA3Q9Y5H8 RNU6-864P-201ENST00000516256 108 ntBASIC3.79□□□□□ -1.8
PCDHA3Q9Y5H8 RNA5SP290-201ENST00000517133 127 ntBASIC3.79□□□□□ -1.8
PCDHA3Q9Y5H8 RNU6-1315P-201ENST00000517187 99 ntBASIC3.79□□□□□ -1.8
PCDHA3Q9Y5H8 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC3.79□□□□□ -1.8
PCDHA3Q9Y5H8 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC3.79□□□□□ -1.8
PCDHA3Q9Y5H8 AC087499.8-201ENST00000578406 226 ntBASIC3.79□□□□□ -1.8
PCDHA3Q9Y5H8 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.79□□□□□ -1.8
PCDHA3Q9Y5H8 MIR4286-201ENST00000580651 93 ntBASIC3.79□□□□□ -1.8
PCDHA3Q9Y5H8 AC006077.1-201ENST00000604746 343 ntBASIC3.79□□□□□ -1.8
PCDHA3Q9Y5H8 CTHRC1P1-201ENST00000605383 469 ntBASIC3.79□□□□□ -1.8
PCDHA3Q9Y5H8 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
PCDHA3Q9Y5H8 AC005344.1-201ENST00000613391 459 ntBASIC3.79□□□□□ -1.8
PCDHA3Q9Y5H8 AL110115.1-201ENST00000614396 364 ntBASIC3.79□□□□□ -1.8
PCDHA3Q9Y5H8 Xist_exon1.1-201ENST00000618930 85 ntBASIC3.79□□□□□ -1.8
PCDHA3Q9Y5H8 AC005858.4-201ENST00000623191 700 ntBASIC3.79□□□□□ -1.8
PCDHA3Q9Y5H8 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
PCDHA3Q9Y5H8 ATP8A2P2-201ENST00000437678 1568 ntBASIC3.79□□□□□ -1.8
PCDHA3Q9Y5H8 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
PCDHA3Q9Y5H8 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
PCDHA3Q9Y5H8 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
PCDHA3Q9Y5H8 TNPO1P3-201ENST00000436471 2662 ntBASIC3.78□□□□□ -1.8
PCDHA3Q9Y5H8 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
PCDHA3Q9Y5H8 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
PCDHA3Q9Y5H8 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
PCDHA3Q9Y5H8 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.78□□□□□ -1.8
PCDHA3Q9Y5H8 AL359693.1-201ENST00000614959 2407 ntBASIC3.78□□□□□ -1.8
PCDHA3Q9Y5H8 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
PCDHA3Q9Y5H8 RNU6-1013P-201ENST00000384180 107 ntBASIC3.78□□□□□ -1.8
PCDHA3Q9Y5H8 Y_RNA.529-201ENST00000384586 119 ntBASIC3.78□□□□□ -1.8
PCDHA3Q9Y5H8 AL122016.1-201ENST00000403365 367 ntBASIC3.78□□□□□ -1.8
PCDHA3Q9Y5H8 NDUFB4P5-201ENST00000415445 361 ntBASIC3.78□□□□□ -1.8
PCDHA3Q9Y5H8 RPLP0P7-201ENST00000416050 667 ntBASIC3.78□□□□□ -1.8
PCDHA3Q9Y5H8 AC092047.1-201ENST00000424997 240 ntBASIC3.78□□□□□ -1.8
PCDHA3Q9Y5H8 AC007919.1-201ENST00000429380 217 ntBASIC3.78□□□□□ -1.8
PCDHA3Q9Y5H8 AL158071.1-201ENST00000430315 461 ntBASIC3.78□□□□□ -1.8
PCDHA3Q9Y5H8 NDUFB4P6-201ENST00000436819 366 ntBASIC3.78□□□□□ -1.8
PCDHA3Q9Y5H8 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.78□□□□□ -1.8
PCDHA3Q9Y5H8 Z82210.1-201ENST00000440037 231 ntBASIC3.78□□□□□ -1.8
PCDHA3Q9Y5H8 PIGFP3-201ENST00000441918 722 ntBASIC3.78□□□□□ -1.8
PCDHA3Q9Y5H8 HMGN2P16-201ENST00000456802 261 ntBASIC3.78□□□□□ -1.8
PCDHA3Q9Y5H8 RNU7-170P-201ENST00000459303 61 ntBASIC3.78□□□□□ -1.8
PCDHA3Q9Y5H8 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC3.78□□□□□ -1.8
PCDHA3Q9Y5H8 AC079140.5-201ENST00000507882 310 ntBASIC3.78□□□□□ -1.8
PCDHA3Q9Y5H8 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC3.78□□□□□ -1.8
PCDHA3Q9Y5H8 IGKV2-23-201ENST00000518729 323 ntBASIC3.78□□□□□ -1.8
PCDHA3Q9Y5H8 UTP23-205ENST00000520733 369 ntTSL 3 BASIC3.78□□□□□ -1.8
PCDHA3Q9Y5H8 AP003122.3-201ENST00000526316 255 ntBASIC3.78□□□□□ -1.8
PCDHA3Q9Y5H8 AC084851.1-201ENST00000529105 249 ntBASIC3.78□□□□□ -1.8
PCDHA3Q9Y5H8 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC3.78□□□□□ -1.8
PCDHA3Q9Y5H8 AC011611.1-201ENST00000552179 197 ntBASIC3.78□□□□□ -1.8
PCDHA3Q9Y5H8 SCOCP1-201ENST00000554676 349 ntBASIC3.78□□□□□ -1.8
PCDHA3Q9Y5H8 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC3.78□□□□□ -1.8
PCDHA3Q9Y5H8 MIR548AC-201ENST00000585049 88 ntBASIC3.78□□□□□ -1.8
PCDHA3Q9Y5H8 AC005498.1-201ENST00000592125 465 ntBASIC3.78□□□□□ -1.8
PCDHA3Q9Y5H8 AC012119.1-201ENST00000603184 222 ntBASIC3.78□□□□□ -1.8
PCDHA3Q9Y5H8 AC087045.1-201ENST00000605856 382 ntBASIC3.78□□□□□ -1.8
PCDHA3Q9Y5H8 AL132765.2-201ENST00000610812 351 ntBASIC3.78□□□□□ -1.8
PCDHA3Q9Y5H8 UBE2Q2P6-201ENST00000612666 153 ntBASIC3.78□□□□□ -1.8
PCDHA3Q9Y5H8 MIR6875-201ENST00000617506 72 ntBASIC3.78□□□□□ -1.8
PCDHA3Q9Y5H8 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC3.78□□□□□ -1.8
PCDHA3Q9Y5H8 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC3.78□□□□□ -1.8
PCDHA3Q9Y5H8 AC048347.1-201ENST00000624621 427 ntBASIC3.78□□□□□ -1.8
PCDHA3Q9Y5H8 TPTEP1-208ENST00000636884 213 ntBASIC3.78□□□□□ -1.8
PCDHA3Q9Y5H8 HSP90AA4P-202ENST00000506915 2228 ntBASIC3.78□□□□□ -1.8
PCDHA3Q9Y5H8 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
PCDHA3Q9Y5H8 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.78□□□□□ -1.81
PCDHA3Q9Y5H8 Y_RNA.301-201ENST00000364990 103 ntBASIC3.77□□□□□ -1.81
PCDHA3Q9Y5H8 Y_RNA.356-201ENST00000365475 113 ntBASIC3.77□□□□□ -1.81
PCDHA3Q9Y5H8 RPL21P90-201ENST00000415692 466 ntBASIC3.77□□□□□ -1.81
PCDHA3Q9Y5H8 AC007390.1-201ENST00000415722 356 ntBASIC3.77□□□□□ -1.81
PCDHA3Q9Y5H8 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC3.77□□□□□ -1.81
PCDHA3Q9Y5H8 AC073063.1-201ENST00000434352 607 ntBASIC3.77□□□□□ -1.81
PCDHA3Q9Y5H8 MRPL50P4-201ENST00000446432 475 ntBASIC3.77□□□□□ -1.81
PCDHA3Q9Y5H8 AMD1P1-201ENST00000457220 922 ntBASIC3.77□□□□□ -1.81
PCDHA3Q9Y5H8 KC877373.1-201ENST00000479066 408 ntBASIC3.77□□□□□ -1.81
PCDHA3Q9Y5H8 AC103851.1-201ENST00000506833 274 ntBASIC3.77□□□□□ -1.81
PCDHA3Q9Y5H8 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
PCDHA3Q9Y5H8 SNORA14.1-201ENST00000516113 141 ntBASIC3.77□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 79 ms