Protein–RNA interactions for Protein: Q9Y5G4

PCDHGA9, Protocadherin gamma-A9, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9Q9Y5G4 RNU6-214P-201ENST00000384130 107 ntBASIC3.82□□□□□ -1.8
PCDHGA9Q9Y5G4 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
PCDHGA9Q9Y5G4 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
PCDHGA9Q9Y5G4 SNORA40C-201ENST00000391285 128 ntBASIC3.82□□□□□ -1.8
PCDHGA9Q9Y5G4 NDUFS5P4-201ENST00000412983 318 ntBASIC3.82□□□□□ -1.8
PCDHGA9Q9Y5G4 RPL21P109-201ENST00000422213 475 ntBASIC3.82□□□□□ -1.8
PCDHGA9Q9Y5G4 RBMY1KP-201ENST00000423480 476 ntBASIC3.82□□□□□ -1.8
PCDHGA9Q9Y5G4 HMGB1P9-201ENST00000429856 646 ntBASIC3.82□□□□□ -1.8
PCDHGA9Q9Y5G4 SNAP23P1-201ENST00000433229 246 ntBASIC3.82□□□□□ -1.8
PCDHGA9Q9Y5G4 HMGB1P18-201ENST00000438801 619 ntBASIC3.82□□□□□ -1.8
PCDHGA9Q9Y5G4 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
PCDHGA9Q9Y5G4 AL078601.1-201ENST00000444542 271 ntBASIC3.82□□□□□ -1.8
PCDHGA9Q9Y5G4 RANP8-201ENST00000444720 713 ntBASIC3.82□□□□□ -1.8
PCDHGA9Q9Y5G4 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC3.82□□□□□ -1.8
PCDHGA9Q9Y5G4 RNU7-138P-201ENST00000459479 64 ntBASIC3.82□□□□□ -1.8
PCDHGA9Q9Y5G4 RN7SL585P-201ENST00000470538 280 ntBASIC3.82□□□□□ -1.8
PCDHGA9Q9Y5G4 AC011005.2-201ENST00000487324 359 ntBASIC3.82□□□□□ -1.8
PCDHGA9Q9Y5G4 AF213884.1-201ENST00000488102 463 ntBASIC3.82□□□□□ -1.8
PCDHGA9Q9Y5G4 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC3.82□□□□□ -1.8
PCDHGA9Q9Y5G4 UBE2CP3-201ENST00000502715 450 ntBASIC3.82□□□□□ -1.8
PCDHGA9Q9Y5G4 AC025554.1-201ENST00000505641 188 ntBASIC3.82□□□□□ -1.8
PCDHGA9Q9Y5G4 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC3.82□□□□□ -1.8
PCDHGA9Q9Y5G4 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC3.82□□□□□ -1.8
PCDHGA9Q9Y5G4 RNU6-703P-201ENST00000516946 107 ntBASIC3.82□□□□□ -1.8
PCDHGA9Q9Y5G4 SNORA31.19-201ENST00000517079 126 ntBASIC3.82□□□□□ -1.8
PCDHGA9Q9Y5G4 TRAPPC2P2-201ENST00000517589 409 ntBASIC3.82□□□□□ -1.8
PCDHGA9Q9Y5G4 AC009902.1-201ENST00000519351 183 ntBASIC3.82□□□□□ -1.8
PCDHGA9Q9Y5G4 RAB11AP2-201ENST00000545905 639 ntBASIC3.82□□□□□ -1.8
PCDHGA9Q9Y5G4 NACA-211ENST00000548563 827 ntTSL 5 BASIC3.82□□□□□ -1.8
PCDHGA9Q9Y5G4 AC026464.5-201ENST00000562497 722 ntBASIC3.82□□□□□ -1.8
PCDHGA9Q9Y5G4 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC3.82□□□□□ -1.8
PCDHGA9Q9Y5G4 MIR5692C1-201ENST00000585309 91 ntBASIC3.82□□□□□ -1.8
PCDHGA9Q9Y5G4 AL117336.2-201ENST00000602435 335 ntBASIC3.82□□□□□ -1.8
PCDHGA9Q9Y5G4 HMGB1P50-201ENST00000605814 607 ntBASIC3.82□□□□□ -1.8
PCDHGA9Q9Y5G4 AC087045.1-201ENST00000605856 382 ntBASIC3.82□□□□□ -1.8
PCDHGA9Q9Y5G4 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC3.82□□□□□ -1.8
PCDHGA9Q9Y5G4 AC005344.1-201ENST00000613391 459 ntBASIC3.82□□□□□ -1.8
PCDHGA9Q9Y5G4 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
PCDHGA9Q9Y5G4 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
PCDHGA9Q9Y5G4 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC3.82□□□□□ -1.8
PCDHGA9Q9Y5G4 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC3.82□□□□□ -1.8
PCDHGA9Q9Y5G4 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC3.81□□□□□ -1.8
PCDHGA9Q9Y5G4 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.81□□□□□ -1.8
PCDHGA9Q9Y5G4 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
PCDHGA9Q9Y5G4 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3.81□□□□□ -1.8
PCDHGA9Q9Y5G4 5S_rRNA.1-201ENST00000364415 116 ntBASIC3.81□□□□□ -1.8
PCDHGA9Q9Y5G4 Y_RNA.301-201ENST00000364990 103 ntBASIC3.81□□□□□ -1.8
PCDHGA9Q9Y5G4 Y_RNA.324-201ENST00000365165 102 ntBASIC3.81□□□□□ -1.8
PCDHGA9Q9Y5G4 VN1R36P-201ENST00000414936 291 ntBASIC3.81□□□□□ -1.8
PCDHGA9Q9Y5G4 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC3.81□□□□□ -1.8
PCDHGA9Q9Y5G4 AL353678.1-201ENST00000422735 741 ntBASIC3.81□□□□□ -1.8
PCDHGA9Q9Y5G4 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC3.81□□□□□ -1.8
PCDHGA9Q9Y5G4 AC007560.1-201ENST00000426912 237 ntBASIC3.81□□□□□ -1.8
PCDHGA9Q9Y5G4 AC017083.1-201ENST00000428093 483 ntBASIC3.81□□□□□ -1.8
PCDHGA9Q9Y5G4 AL445584.1-201ENST00000431451 330 ntBASIC3.81□□□□□ -1.8
PCDHGA9Q9Y5G4 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC3.81□□□□□ -1.8
PCDHGA9Q9Y5G4 HMGB3P22-202ENST00000451823 572 ntBASIC3.81□□□□□ -1.8
PCDHGA9Q9Y5G4 AC092798.1-201ENST00000458542 409 ntBASIC3.81□□□□□ -1.8
PCDHGA9Q9Y5G4 RPL23AP62-201ENST00000463396 453 ntBASIC3.81□□□□□ -1.8
PCDHGA9Q9Y5G4 AC128713.1-201ENST00000471495 306 ntBASIC3.81□□□□□ -1.8
PCDHGA9Q9Y5G4 AC103851.1-201ENST00000506833 274 ntBASIC3.81□□□□□ -1.8
PCDHGA9Q9Y5G4 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.81□□□□□ -1.8
PCDHGA9Q9Y5G4 TBCAP3-201ENST00000512475 312 ntBASIC3.81□□□□□ -1.8
PCDHGA9Q9Y5G4 RPL39P5-202ENST00000512505 151 ntBASIC3.81□□□□□ -1.8
PCDHGA9Q9Y5G4 RNU4ATAC6P-201ENST00000516592 126 ntBASIC3.81□□□□□ -1.8
PCDHGA9Q9Y5G4 Y_RNA.691-201ENST00000516611 103 ntBASIC3.81□□□□□ -1.8
PCDHGA9Q9Y5G4 RNU6-572P-201ENST00000516724 80 ntBASIC3.81□□□□□ -1.8
PCDHGA9Q9Y5G4 SNORA25.17-201ENST00000517184 124 ntBASIC3.81□□□□□ -1.8
PCDHGA9Q9Y5G4 RNU6-323P-201ENST00000521915 107 ntBASIC3.81□□□□□ -1.8
PCDHGA9Q9Y5G4 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
PCDHGA9Q9Y5G4 AC120057.2-201ENST00000571520 271 ntBASIC3.81□□□□□ -1.8
PCDHGA9Q9Y5G4 MIR4782-201ENST00000577987 79 ntBASIC3.81□□□□□ -1.8
PCDHGA9Q9Y5G4 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC3.81□□□□□ -1.8
PCDHGA9Q9Y5G4 C8orf59P2-201ENST00000603441 271 ntBASIC3.81□□□□□ -1.8
PCDHGA9Q9Y5G4 AP000787.2-201ENST00000604432 568 ntBASIC3.81□□□□□ -1.8
PCDHGA9Q9Y5G4 AC007938.3-201ENST00000604965 623 ntBASIC3.81□□□□□ -1.8
PCDHGA9Q9Y5G4 AC008962.1-201ENST00000605729 304 ntBASIC3.81□□□□□ -1.8
PCDHGA9Q9Y5G4 AL121757.2-201ENST00000611223 313 ntBASIC3.81□□□□□ -1.8
PCDHGA9Q9Y5G4 uc_338.15-201ENST00000615470 191 ntBASIC3.81□□□□□ -1.8
PCDHGA9Q9Y5G4 AL354798.1-201ENST00000622505 329 ntBASIC3.81□□□□□ -1.8
PCDHGA9Q9Y5G4 AC012442.3-202ENST00000636742 206 ntBASIC3.81□□□□□ -1.8
PCDHGA9Q9Y5G4 U6.99-201ENST00000637524 83 ntBASIC3.81□□□□□ -1.8
PCDHGA9Q9Y5G4 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC3.81□□□□□ -1.8
PCDHGA9Q9Y5G4 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
PCDHGA9Q9Y5G4 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
PCDHGA9Q9Y5G4 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC3.8□□□□□ -1.8
PCDHGA9Q9Y5G4 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
PCDHGA9Q9Y5G4 SRP72P2-201ENST00000344851 1979 ntBASIC3.8□□□□□ -1.8
PCDHGA9Q9Y5G4 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
PCDHGA9Q9Y5G4 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
PCDHGA9Q9Y5G4 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
PCDHGA9Q9Y5G4 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
PCDHGA9Q9Y5G4 Y_RNA.61-201ENST00000362835 102 ntBASIC3.8□□□□□ -1.8
PCDHGA9Q9Y5G4 SNORD46.1-201ENST00000364139 104 ntBASIC3.8□□□□□ -1.8
PCDHGA9Q9Y5G4 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
PCDHGA9Q9Y5G4 RNU2-3P-201ENST00000410144 191 ntBASIC3.8□□□□□ -1.8
PCDHGA9Q9Y5G4 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC3.8□□□□□ -1.8
PCDHGA9Q9Y5G4 AC007390.1-201ENST00000415722 356 ntBASIC3.8□□□□□ -1.8
PCDHGA9Q9Y5G4 RPS15AP6-201ENST00000420703 385 ntBASIC3.8□□□□□ -1.8
PCDHGA9Q9Y5G4 AL691449.1-201ENST00000426570 421 ntBASIC3.8□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 114.7 ms