Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
PCDHB1Q9Y5F3 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
PCDHB1Q9Y5F3 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC3.84□□□□□ -1.79
PCDHB1Q9Y5F3 AC090740.1-201ENST00000623193 2262 ntBASIC3.84□□□□□ -1.79
PCDHB1Q9Y5F3 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
PCDHB1Q9Y5F3 Y_RNA.67-201ENST00000362870 100 ntBASIC3.84□□□□□ -1.79
PCDHB1Q9Y5F3 Y_RNA.132-201ENST00000363421 102 ntBASIC3.84□□□□□ -1.79
PCDHB1Q9Y5F3 Y_RNA.184-201ENST00000363884 108 ntBASIC3.84□□□□□ -1.79
PCDHB1Q9Y5F3 SNORA4.3-201ENST00000365564 137 ntBASIC3.84□□□□□ -1.79
PCDHB1Q9Y5F3 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
PCDHB1Q9Y5F3 DEFB109C-201ENST00000382575 264 ntBASIC3.84□□□□□ -1.79
PCDHB1Q9Y5F3 DEFB109B-201ENST00000382656 264 ntBASIC3.84□□□□□ -1.79
PCDHB1Q9Y5F3 MIR491-201ENST00000384877 84 ntBASIC3.84□□□□□ -1.79
PCDHB1Q9Y5F3 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC3.84□□□□□ -1.79
PCDHB1Q9Y5F3 AC063979.1-201ENST00000415539 377 ntBASIC3.84□□□□□ -1.79
PCDHB1Q9Y5F3 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC3.84□□□□□ -1.79
PCDHB1Q9Y5F3 HMGN2P31-201ENST00000432430 273 ntBASIC3.84□□□□□ -1.79
PCDHB1Q9Y5F3 HMGB1P18-201ENST00000438801 619 ntBASIC3.84□□□□□ -1.79
PCDHB1Q9Y5F3 RPS24P13-201ENST00000442520 397 ntBASIC3.84□□□□□ -1.79
PCDHB1Q9Y5F3 AC233279.1-201ENST00000455300 423 ntBASIC3.84□□□□□ -1.79
PCDHB1Q9Y5F3 DYNLL1P5-201ENST00000467158 270 ntBASIC3.84□□□□□ -1.79
PCDHB1Q9Y5F3 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC3.84□□□□□ -1.79
PCDHB1Q9Y5F3 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC3.84□□□□□ -1.79
PCDHB1Q9Y5F3 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
PCDHB1Q9Y5F3 RNA5SP290-201ENST00000517133 127 ntBASIC3.84□□□□□ -1.79
PCDHB1Q9Y5F3 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC3.84□□□□□ -1.79
PCDHB1Q9Y5F3 CYCSP27-201ENST00000527643 293 ntBASIC3.84□□□□□ -1.79
PCDHB1Q9Y5F3 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC3.84□□□□□ -1.79
PCDHB1Q9Y5F3 AC090115.3-201ENST00000553218 849 ntBASIC3.84□□□□□ -1.79
PCDHB1Q9Y5F3 AC087499.8-201ENST00000578406 226 ntBASIC3.84□□□□□ -1.79
PCDHB1Q9Y5F3 MIR548AC-201ENST00000585049 88 ntBASIC3.84□□□□□ -1.79
PCDHB1Q9Y5F3 AC022432.1-201ENST00000595739 310 ntBASIC3.84□□□□□ -1.79
PCDHB1Q9Y5F3 AC078795.3-201ENST00000602913 472 ntBASIC3.84□□□□□ -1.79
PCDHB1Q9Y5F3 AL133255.1-201ENST00000606374 441 ntBASIC3.84□□□□□ -1.79
PCDHB1Q9Y5F3 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
PCDHB1Q9Y5F3 AC104237.2-201ENST00000612456 443 ntBASIC3.84□□□□□ -1.79
PCDHB1Q9Y5F3 Xist_exon1.1-201ENST00000618930 85 ntBASIC3.84□□□□□ -1.79
PCDHB1Q9Y5F3 RMST_7.1-201ENST00000621935 268 ntBASIC3.84□□□□□ -1.79
PCDHB1Q9Y5F3 AC010733.2-201ENST00000589496 5702 ntBASIC3.84□□□□□ -1.79
PCDHB1Q9Y5F3 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
PCDHB1Q9Y5F3 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.84□□□□□ -1.8
PCDHB1Q9Y5F3 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC3.84□□□□□ -1.8
PCDHB1Q9Y5F3 AC007785.2-201ENST00000598627 1916 ntBASIC3.83□□□□□ -1.8
PCDHB1Q9Y5F3 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
PCDHB1Q9Y5F3 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
PCDHB1Q9Y5F3 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC3.83□□□□□ -1.8
PCDHB1Q9Y5F3 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC3.83□□□□□ -1.8
PCDHB1Q9Y5F3 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
PCDHB1Q9Y5F3 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
PCDHB1Q9Y5F3 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
PCDHB1Q9Y5F3 Y_RNA.480-201ENST00000384364 102 ntBASIC3.83□□□□□ -1.8
PCDHB1Q9Y5F3 RNU6-1197P-201ENST00000391183 107 ntBASIC3.83□□□□□ -1.8
PCDHB1Q9Y5F3 RPL21P90-201ENST00000415692 466 ntBASIC3.83□□□□□ -1.8
PCDHB1Q9Y5F3 RPLP0P7-201ENST00000416050 667 ntBASIC3.83□□□□□ -1.8
PCDHB1Q9Y5F3 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC3.83□□□□□ -1.8
PCDHB1Q9Y5F3 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC3.83□□□□□ -1.8
PCDHB1Q9Y5F3 AC007919.1-201ENST00000429380 217 ntBASIC3.83□□□□□ -1.8
PCDHB1Q9Y5F3 RPL23AP69-201ENST00000431134 458 ntBASIC3.83□□□□□ -1.8
PCDHB1Q9Y5F3 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC3.83□□□□□ -1.8
PCDHB1Q9Y5F3 HMGB1P12-201ENST00000438594 598 ntBASIC3.83□□□□□ -1.8
PCDHB1Q9Y5F3 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC3.83□□□□□ -1.8
PCDHB1Q9Y5F3 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC3.83□□□□□ -1.8
PCDHB1Q9Y5F3 RPS4XP13-201ENST00000483219 789 ntBASIC3.83□□□□□ -1.8
PCDHB1Q9Y5F3 MTCO1P29-201ENST00000496868 288 ntBASIC3.83□□□□□ -1.8
PCDHB1Q9Y5F3 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC3.83□□□□□ -1.8
PCDHB1Q9Y5F3 SNORA14.1-201ENST00000516113 141 ntBASIC3.83□□□□□ -1.8
PCDHB1Q9Y5F3 SNORA74D-201ENST00000516404 141 ntBASIC3.83□□□□□ -1.8
PCDHB1Q9Y5F3 RNA5SP164-201ENST00000516533 110 ntBASIC3.83□□□□□ -1.8
PCDHB1Q9Y5F3 SCARNA13-201ENST00000516672 275 ntBASIC3.83□□□□□ -1.8
PCDHB1Q9Y5F3 RNU6-1315P-201ENST00000517187 99 ntBASIC3.83□□□□□ -1.8
PCDHB1Q9Y5F3 RN7SKP289-201ENST00000517244 295 ntBASIC3.83□□□□□ -1.8
PCDHB1Q9Y5F3 APAF1-207ENST00000547743 651 ntTSL 3 BASIC3.83□□□□□ -1.8
PCDHB1Q9Y5F3 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC3.83□□□□□ -1.8
PCDHB1Q9Y5F3 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC3.83□□□□□ -1.8
PCDHB1Q9Y5F3 TRAV28-201ENST00000557548 323 ntBASIC3.83□□□□□ -1.8
PCDHB1Q9Y5F3 AC090877.1-201ENST00000561418 344 ntBASIC3.83□□□□□ -1.8
PCDHB1Q9Y5F3 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC3.83□□□□□ -1.8
PCDHB1Q9Y5F3 AC012119.1-201ENST00000603184 222 ntBASIC3.83□□□□□ -1.8
PCDHB1Q9Y5F3 CTHRC1P1-201ENST00000605383 469 ntBASIC3.83□□□□□ -1.8
PCDHB1Q9Y5F3 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
PCDHB1Q9Y5F3 AC103710.3-201ENST00000608157 948 ntBASIC3.83□□□□□ -1.8
PCDHB1Q9Y5F3 AC048347.1-201ENST00000624621 427 ntBASIC3.83□□□□□ -1.8
PCDHB1Q9Y5F3 MIR1302-1-201ENST00000637932 143 ntBASIC3.83□□□□□ -1.8
PCDHB1Q9Y5F3 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
PCDHB1Q9Y5F3 AL359693.1-201ENST00000614959 2407 ntBASIC3.83□□□□□ -1.8
PCDHB1Q9Y5F3 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.83□□□□□ -1.8
PCDHB1Q9Y5F3 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC3.82□□□□□ -1.8
PCDHB1Q9Y5F3 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC3.82□□□□□ -1.8
PCDHB1Q9Y5F3 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC3.82□□□□□ -1.8
PCDHB1Q9Y5F3 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
PCDHB1Q9Y5F3 Y_RNA.138-201ENST00000363462 102 ntBASIC3.82□□□□□ -1.8
PCDHB1Q9Y5F3 Y_RNA.301-201ENST00000364990 103 ntBASIC3.82□□□□□ -1.8
PCDHB1Q9Y5F3 Y_RNA.460-201ENST00000384255 102 ntBASIC3.82□□□□□ -1.8
PCDHB1Q9Y5F3 RPL21P17-201ENST00000397467 475 ntBASIC3.82□□□□□ -1.8
PCDHB1Q9Y5F3 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.82□□□□□ -1.8
PCDHB1Q9Y5F3 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC3.82□□□□□ -1.8
PCDHB1Q9Y5F3 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC3.82□□□□□ -1.8
PCDHB1Q9Y5F3 RNU7-66P-201ENST00000459469 62 ntBASIC3.82□□□□□ -1.8
PCDHB1Q9Y5F3 RPL7P5-201ENST00000471472 736 ntBASIC3.82□□□□□ -1.8
PCDHB1Q9Y5F3 Y_RNA.691-201ENST00000516611 103 ntBASIC3.82□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 136.3 ms