Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
PCDHB11Q9Y5F2 INTS6P1-201ENST00000504674 2530 ntBASIC5.03□□□□□ -1.6
PCDHB11Q9Y5F2 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
PCDHB11Q9Y5F2 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
PCDHB11Q9Y5F2 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
PCDHB11Q9Y5F2 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
PCDHB11Q9Y5F2 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
PCDHB11Q9Y5F2 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC5.02□□□□□ -1.61
PCDHB11Q9Y5F2 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
PCDHB11Q9Y5F2 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
PCDHB11Q9Y5F2 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC5.02□□□□□ -1.61
PCDHB11Q9Y5F2 AL353743.1-202ENST00000431724 1695 ntBASIC5.02□□□□□ -1.61
PCDHB11Q9Y5F2 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC5.02□□□□□ -1.61
PCDHB11Q9Y5F2 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC5.02□□□□□ -1.61
PCDHB11Q9Y5F2 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
PCDHB11Q9Y5F2 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
PCDHB11Q9Y5F2 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
PCDHB11Q9Y5F2 AC008079.2-201ENST00000623543 20396 ntBASIC5.02□□□□□ -1.61
PCDHB11Q9Y5F2 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
PCDHB11Q9Y5F2 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC5.02□□□□□ -1.61
PCDHB11Q9Y5F2 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
PCDHB11Q9Y5F2 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
PCDHB11Q9Y5F2 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
PCDHB11Q9Y5F2 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
PCDHB11Q9Y5F2 RNU6-527P-201ENST00000363425 104 ntBASIC5.02□□□□□ -1.61
PCDHB11Q9Y5F2 CRP-203ENST00000368111 512 ntTSL 3 BASIC5.02□□□□□ -1.61
PCDHB11Q9Y5F2 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
PCDHB11Q9Y5F2 Y_RNA.418-201ENST00000384029 102 ntBASIC5.02□□□□□ -1.61
PCDHB11Q9Y5F2 Y_RNA.435-201ENST00000384095 112 ntBASIC5.02□□□□□ -1.61
PCDHB11Q9Y5F2 MIR1182-201ENST00000408363 97 ntBASIC5.02□□□□□ -1.61
PCDHB11Q9Y5F2 RNA5SP31-201ENST00000411144 127 ntBASIC5.02□□□□□ -1.61
PCDHB11Q9Y5F2 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC5.02□□□□□ -1.61
PCDHB11Q9Y5F2 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC5.02□□□□□ -1.61
PCDHB11Q9Y5F2 NUTF2P3-201ENST00000448540 384 ntBASIC5.02□□□□□ -1.61
PCDHB11Q9Y5F2 NUTF2P7-201ENST00000453086 375 ntBASIC5.02□□□□□ -1.61
PCDHB11Q9Y5F2 AC087477.1-201ENST00000465747 340 ntBASIC5.02□□□□□ -1.61
PCDHB11Q9Y5F2 AC097484.1-201ENST00000471148 389 ntBASIC5.02□□□□□ -1.61
PCDHB11Q9Y5F2 BX284632.1-201ENST00000478218 541 ntBASIC5.02□□□□□ -1.61
PCDHB11Q9Y5F2 RPL31P13-201ENST00000484151 370 ntBASIC5.02□□□□□ -1.61
PCDHB11Q9Y5F2 AF186996.7-201ENST00000492781 209 ntBASIC5.02□□□□□ -1.61
PCDHB11Q9Y5F2 RPL23AP49-201ENST00000492925 468 ntBASIC5.02□□□□□ -1.61
PCDHB11Q9Y5F2 AC091959.1-201ENST00000495857 238 ntBASIC5.02□□□□□ -1.61
PCDHB11Q9Y5F2 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC5.02□□□□□ -1.61
PCDHB11Q9Y5F2 TRAV28-201ENST00000557548 323 ntBASIC5.02□□□□□ -1.61
PCDHB11Q9Y5F2 MIR4330-201ENST00000579077 105 ntBASIC5.02□□□□□ -1.61
PCDHB11Q9Y5F2 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC5.02□□□□□ -1.61
PCDHB11Q9Y5F2 MIR6715B-201ENST00000637172 77 ntBASIC5.02□□□□□ -1.61
PCDHB11Q9Y5F2 BX322639.1-202ENST00000423987 2213 ntBASIC5.02□□□□□ -1.61
PCDHB11Q9Y5F2 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
PCDHB11Q9Y5F2 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC5.02□□□□□ -1.61
PCDHB11Q9Y5F2 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
PCDHB11Q9Y5F2 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
PCDHB11Q9Y5F2 AC099654.2-201ENST00000433031 1980 ntBASIC5.02□□□□□ -1.61
PCDHB11Q9Y5F2 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC5.02□□□□□ -1.61
PCDHB11Q9Y5F2 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC5.01□□□□□ -1.61
PCDHB11Q9Y5F2 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
PCDHB11Q9Y5F2 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC5.01□□□□□ -1.61
PCDHB11Q9Y5F2 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
PCDHB11Q9Y5F2 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
PCDHB11Q9Y5F2 RNU6-335P-201ENST00000364563 113 ntBASIC5.01□□□□□ -1.61
PCDHB11Q9Y5F2 Y_RNA.570-201ENST00000384750 101 ntBASIC5.01□□□□□ -1.61
PCDHB11Q9Y5F2 EIF4EBP2P3-201ENST00000403144 334 ntBASIC5.01□□□□□ -1.61
PCDHB11Q9Y5F2 U3.37-201ENST00000408528 213 ntBASIC5.01□□□□□ -1.61
PCDHB11Q9Y5F2 RNA5SP296-201ENST00000410523 111 ntBASIC5.01□□□□□ -1.61
PCDHB11Q9Y5F2 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC5.01□□□□□ -1.61
PCDHB11Q9Y5F2 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC5.01□□□□□ -1.61
PCDHB11Q9Y5F2 AL390729.2-201ENST00000416137 156 ntBASIC5.01□□□□□ -1.61
PCDHB11Q9Y5F2 AL590383.1-201ENST00000428602 75 ntBASIC5.01□□□□□ -1.61
PCDHB11Q9Y5F2 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC5.01□□□□□ -1.61
PCDHB11Q9Y5F2 AC007395.1-201ENST00000451333 677 ntBASIC5.01□□□□□ -1.61
PCDHB11Q9Y5F2 RPS5P7-201ENST00000456664 608 ntBASIC5.01□□□□□ -1.61
PCDHB11Q9Y5F2 RN7SL738P-201ENST00000470264 297 ntBASIC5.01□□□□□ -1.61
PCDHB11Q9Y5F2 AC117440.1-201ENST00000474107 571 ntBASIC5.01□□□□□ -1.61
PCDHB11Q9Y5F2 HMGB1P22-201ENST00000505315 124 ntBASIC5.01□□□□□ -1.61
PCDHB11Q9Y5F2 TRAPPC2P7-201ENST00000509650 231 ntBASIC5.01□□□□□ -1.61
PCDHB11Q9Y5F2 RN7SKP276-201ENST00000516242 268 ntBASIC5.01□□□□□ -1.61
PCDHB11Q9Y5F2 SNORA27.4-201ENST00000516650 95 ntBASIC5.01□□□□□ -1.61
PCDHB11Q9Y5F2 SNORA43.2-201ENST00000516652 128 ntBASIC5.01□□□□□ -1.61
PCDHB11Q9Y5F2 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC5.01□□□□□ -1.61
PCDHB11Q9Y5F2 AC006349.1-201ENST00000555526 235 ntBASIC5.01□□□□□ -1.61
PCDHB11Q9Y5F2 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC5.01□□□□□ -1.61
PCDHB11Q9Y5F2 AC024153.1-201ENST00000603103 365 ntBASIC5.01□□□□□ -1.61
PCDHB11Q9Y5F2 AC104465.1-201ENST00000611365 139 ntBASIC5.01□□□□□ -1.61
PCDHB11Q9Y5F2 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC5.01□□□□□ -1.61
PCDHB11Q9Y5F2 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC5.01□□□□□ -1.61
PCDHB11Q9Y5F2 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC5□□□□□ -1.61
PCDHB11Q9Y5F2 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
PCDHB11Q9Y5F2 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC5□□□□□ -1.61
PCDHB11Q9Y5F2 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
PCDHB11Q9Y5F2 SNURFL-201ENST00000309296 343 ntBASIC5□□□□□ -1.61
PCDHB11Q9Y5F2 MIR410-201ENST00000362222 80 ntBASIC5□□□□□ -1.61
PCDHB11Q9Y5F2 Y_RNA.8-201ENST00000362353 102 ntBASIC5□□□□□ -1.61
PCDHB11Q9Y5F2 Y_RNA.398-201ENST00000383952 99 ntBASIC5□□□□□ -1.61
PCDHB11Q9Y5F2 SNORA46.1-201ENST00000391069 153 ntBASIC5□□□□□ -1.61
PCDHB11Q9Y5F2 FAR2P2-201ENST00000413041 594 ntBASIC5□□□□□ -1.61
PCDHB11Q9Y5F2 COX6B1P1-201ENST00000415962 213 ntBASIC5□□□□□ -1.61
PCDHB11Q9Y5F2 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC5□□□□□ -1.61
PCDHB11Q9Y5F2 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC5□□□□□ -1.61
PCDHB11Q9Y5F2 AC006026.2-201ENST00000457376 180 ntBASIC5□□□□□ -1.61
PCDHB11Q9Y5F2 SNORD2.1-201ENST00000458762 69 ntBASIC5□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 143.5 ms