Protein–RNA interactions for Protein: Q9UQ88

CDK11A, Cyclin-dependent kinase 11A, humanhuman

Predicted RBP Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11AQ9UQ88 MIR4425-201ENST00000580572 84 ntBASIC4.97□□□□□ -1.61
CDK11AQ9UQ88 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC4.97□□□□□ -1.61
CDK11AQ9UQ88 AC004520.1-201ENST00000608362 1413 ntBASIC4.97□□□□□ -1.61
CDK11AQ9UQ88 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC4.96□□□□□ -1.61
CDK11AQ9UQ88 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC4.96□□□□□ -1.61
CDK11AQ9UQ88 ZNF680P1-201ENST00000436625 1469 ntBASIC4.96□□□□□ -1.62
CDK11AQ9UQ88 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
CDK11AQ9UQ88 Y_RNA.256-201ENST00000364594 104 ntBASIC4.96□□□□□ -1.62
CDK11AQ9UQ88 RNU6-641P-201ENST00000384006 107 ntBASIC4.96□□□□□ -1.62
CDK11AQ9UQ88 RNU6-74P-201ENST00000384235 107 ntBASIC4.96□□□□□ -1.62
CDK11AQ9UQ88 RNU6-606P-201ENST00000384721 111 ntBASIC4.96□□□□□ -1.62
CDK11AQ9UQ88 RNU6-780P-201ENST00000391030 104 ntBASIC4.96□□□□□ -1.62
CDK11AQ9UQ88 AL359634.1-202ENST00000404721 284 ntBASIC4.96□□□□□ -1.62
CDK11AQ9UQ88 RNU2-9P-201ENST00000410194 145 ntBASIC4.96□□□□□ -1.62
CDK11AQ9UQ88 AL353193.1-201ENST00000421444 268 ntBASIC4.96□□□□□ -1.62
CDK11AQ9UQ88 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC4.96□□□□□ -1.62
CDK11AQ9UQ88 RAC1P6-201ENST00000423911 575 ntBASIC4.96□□□□□ -1.62
CDK11AQ9UQ88 RPL23AP82-202ENST00000427528 469 ntBASIC4.96□□□□□ -1.62
CDK11AQ9UQ88 RPL7L1P10-201ENST00000427790 463 ntBASIC4.96□□□□□ -1.62
CDK11AQ9UQ88 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC4.96□□□□□ -1.62
CDK11AQ9UQ88 RPL36AP6-201ENST00000435770 321 ntBASIC4.96□□□□□ -1.62
CDK11AQ9UQ88 RBMX2P4-201ENST00000441256 376 ntBASIC4.96□□□□□ -1.62
CDK11AQ9UQ88 AC025750.2-201ENST00000442609 450 ntBASIC4.96□□□□□ -1.62
CDK11AQ9UQ88 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC4.96□□□□□ -1.62
CDK11AQ9UQ88 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC4.96□□□□□ -1.62
CDK11AQ9UQ88 CENPBD1P1-201ENST00000464061 469 ntBASIC4.96□□□□□ -1.62
CDK11AQ9UQ88 RPL23AP14-201ENST00000468281 468 ntBASIC4.96□□□□□ -1.62
CDK11AQ9UQ88 AC010631.1-201ENST00000474150 156 ntBASIC4.96□□□□□ -1.62
CDK11AQ9UQ88 AC126389.1-201ENST00000477436 290 ntBASIC4.96□□□□□ -1.62
CDK11AQ9UQ88 AC117522.1-201ENST00000509821 380 ntBASIC4.96□□□□□ -1.62
CDK11AQ9UQ88 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC4.96□□□□□ -1.62
CDK11AQ9UQ88 RNU6-1092P-201ENST00000516955 87 ntBASIC4.96□□□□□ -1.62
CDK11AQ9UQ88 RPS3AP4-201ENST00000555161 764 ntBASIC4.96□□□□□ -1.62
CDK11AQ9UQ88 MIR3186-201ENST00000577404 85 ntBASIC4.96□□□□□ -1.62
CDK11AQ9UQ88 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC4.96□□□□□ -1.62
CDK11AQ9UQ88 AL162413.1-201ENST00000603198 110 ntBASIC4.96□□□□□ -1.62
CDK11AQ9UQ88 AP001596.2-201ENST00000608410 312 ntBASIC4.96□□□□□ -1.62
CDK11AQ9UQ88 RMST_8.1-201ENST00000610287 165 ntBASIC4.96□□□□□ -1.62
CDK11AQ9UQ88 AL137790.1-201ENST00000634283 177 ntBASIC4.96□□□□□ -1.62
CDK11AQ9UQ88 MAPK10-322ENST00000641485 4530 ntBASIC4.96□□□□□ -1.62
CDK11AQ9UQ88 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC4.96□□□□□ -1.62
CDK11AQ9UQ88 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC4.96□□□□□ -1.62
CDK11AQ9UQ88 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC4.95□□□□□ -1.62
CDK11AQ9UQ88 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
CDK11AQ9UQ88 RNU6-960P-201ENST00000364056 120 ntBASIC4.95□□□□□ -1.62
CDK11AQ9UQ88 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC4.95□□□□□ -1.62
CDK11AQ9UQ88 RNU6-483P-201ENST00000384088 108 ntBASIC4.95□□□□□ -1.62
CDK11AQ9UQ88 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
CDK11AQ9UQ88 AL136116.1-201ENST00000403591 381 ntBASIC4.95□□□□□ -1.62
CDK11AQ9UQ88 RN7SKP220-201ENST00000410611 288 ntBASIC4.95□□□□□ -1.62
CDK11AQ9UQ88 AL356968.1-201ENST00000416622 474 ntBASIC4.95□□□□□ -1.62
CDK11AQ9UQ88 MTND4LP11-201ENST00000422184 280 ntBASIC4.95□□□□□ -1.62
CDK11AQ9UQ88 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC4.95□□□□□ -1.62
CDK11AQ9UQ88 FCF1P3-201ENST00000496394 590 ntBASIC4.95□□□□□ -1.62
CDK11AQ9UQ88 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC4.95□□□□□ -1.62
CDK11AQ9UQ88 AC006445.2-201ENST00000510061 472 ntBASIC4.95□□□□□ -1.62
CDK11AQ9UQ88 RNU6-1281P-201ENST00000516223 105 ntBASIC4.95□□□□□ -1.62
CDK11AQ9UQ88 SCARNA15.2-201ENST00000516409 127 ntBASIC4.95□□□□□ -1.62
CDK11AQ9UQ88 MAL2-206ENST00000522187 547 ntTSL 4 BASIC4.95□□□□□ -1.62
CDK11AQ9UQ88 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC4.95□□□□□ -1.62
CDK11AQ9UQ88 RPL23AP84-201ENST00000571193 464 ntBASIC4.95□□□□□ -1.62
CDK11AQ9UQ88 HSPE1P7-201ENST00000604681 321 ntBASIC4.95□□□□□ -1.62
CDK11AQ9UQ88 AC093788.1-201ENST00000609356 927 ntBASIC4.95□□□□□ -1.62
CDK11AQ9UQ88 SDR42E1P2-201ENST00000614861 481 ntBASIC4.95□□□□□ -1.62
CDK11AQ9UQ88 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC4.95□□□□□ -1.62
CDK11AQ9UQ88 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC4.95□□□□□ -1.62
CDK11AQ9UQ88 AC092628.2-201ENST00000622492 339 ntBASIC4.95□□□□□ -1.62
CDK11AQ9UQ88 AC099506.2-201ENST00000623074 221 ntBASIC4.95□□□□□ -1.62
CDK11AQ9UQ88 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
CDK11AQ9UQ88 AC233263.6-201ENST00000631132 1963 ntBASIC4.95□□□□□ -1.62
CDK11AQ9UQ88 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC4.95□□□□□ -1.62
CDK11AQ9UQ88 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC4.94□□□□□ -1.62
CDK11AQ9UQ88 SNORA36C-201ENST00000384289 132 ntBASIC4.94□□□□□ -1.62
CDK11AQ9UQ88 MIR514A1-201ENST00000385133 98 ntBASIC4.94□□□□□ -1.62
CDK11AQ9UQ88 AC018630.2-202ENST00000422992 927 ntBASIC4.94□□□□□ -1.62
CDK11AQ9UQ88 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC4.94□□□□□ -1.62
CDK11AQ9UQ88 TAAR7P-201ENST00000436141 242 ntBASIC4.94□□□□□ -1.62
CDK11AQ9UQ88 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC4.94□□□□□ -1.62
CDK11AQ9UQ88 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC4.94□□□□□ -1.62
CDK11AQ9UQ88 AC009237.8-201ENST00000445492 379 ntBASIC4.94□□□□□ -1.62
CDK11AQ9UQ88 RNU7-63P-201ENST00000459054 62 ntBASIC4.94□□□□□ -1.62
CDK11AQ9UQ88 RNU6-261P-201ENST00000459506 102 ntBASIC4.94□□□□□ -1.62
CDK11AQ9UQ88 AC083798.1-201ENST00000472671 131 ntBASIC4.94□□□□□ -1.62
CDK11AQ9UQ88 AL049874.1-201ENST00000489560 388 ntBASIC4.94□□□□□ -1.62
CDK11AQ9UQ88 AC116562.3-201ENST00000506136 177 ntBASIC4.94□□□□□ -1.62
CDK11AQ9UQ88 PRDX4P1-201ENST00000507189 574 ntBASIC4.94□□□□□ -1.62
CDK11AQ9UQ88 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC4.94□□□□□ -1.62
CDK11AQ9UQ88 Y_RNA.704-201ENST00000516851 102 ntBASIC4.94□□□□□ -1.62
CDK11AQ9UQ88 AC068587.5-201ENST00000528506 175 ntBASIC4.94□□□□□ -1.62
CDK11AQ9UQ88 MIR3609-201ENST00000582661 80 ntBASIC4.94□□□□□ -1.62
CDK11AQ9UQ88 uc_338.25-201ENST00000613756 156 ntBASIC4.94□□□□□ -1.62
CDK11AQ9UQ88 AP003122.6-201ENST00000623831 495 ntBASIC4.94□□□□□ -1.62
CDK11AQ9UQ88 DLD-214ENST00000639772 421 ntTSL 5 BASIC4.94□□□□□ -1.62
CDK11AQ9UQ88 AL137003.2-201ENST00000606924 2538 ntBASIC4.94□□□□□ -1.62
CDK11AQ9UQ88 ANKRD26P2-201ENST00000445530 1710 ntBASIC4.94□□□□□ -1.62
CDK11AQ9UQ88 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
CDK11AQ9UQ88 FAM35BP-202ENST00000497389 3337 ntBASIC4.94□□□□□ -1.62
CDK11AQ9UQ88 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
CDK11AQ9UQ88 Y_RNA.22-201ENST00000362492 102 ntBASIC4.93□□□□□ -1.62
CDK11AQ9UQ88 SNORA5B-201ENST00000363786 132 ntBASIC4.93□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 103.7 ms