Protein–RNA interactions for Protein: Q9UBQ0

VPS29, Vacuolar protein sorting-associated protein 29, humanhuman

Predictions only

Length 182 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29Q9UBQ0 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC1.52□□□□□ -2.17
VPS29Q9UBQ0 SNORA4.4-201ENST00000515921 135 ntBASIC1.52□□□□□ -2.17
VPS29Q9UBQ0 AC044913.1-201ENST00000557200 430 ntBASIC1.52□□□□□ -2.17
VPS29Q9UBQ0 AC021739.1-201ENST00000559631 174 ntBASIC1.52□□□□□ -2.17
VPS29Q9UBQ0 AL078605.1-201ENST00000603529 500 ntBASIC1.52□□□□□ -2.17
VPS29Q9UBQ0 uc_338.5-201ENST00000611839 155 ntBASIC1.52□□□□□ -2.17
VPS29Q9UBQ0 AC107075.1-201ENST00000613695 314 ntBASIC1.52□□□□□ -2.17
VPS29Q9UBQ0 AC010133.1-201ENST00000615809 842 ntBASIC1.52□□□□□ -2.17
VPS29Q9UBQ0 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
VPS29Q9UBQ0 MIR504-201ENST00000385065 83 ntBASIC1.51□□□□□ -2.17
VPS29Q9UBQ0 POLHP1-201ENST00000411806 470 ntBASIC1.51□□□□□ -2.17
VPS29Q9UBQ0 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC1.51□□□□□ -2.17
VPS29Q9UBQ0 PGBD4P6-201ENST00000421501 610 ntBASIC1.51□□□□□ -2.17
VPS29Q9UBQ0 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC1.51□□□□□ -2.17
VPS29Q9UBQ0 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC1.51□□□□□ -2.17
VPS29Q9UBQ0 HMGN2P10-201ENST00000448085 265 ntBASIC1.51□□□□□ -2.17
VPS29Q9UBQ0 SNORD121B-201ENST00000458838 81 ntBASIC1.51□□□□□ -2.17
VPS29Q9UBQ0 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC1.51□□□□□ -2.17
VPS29Q9UBQ0 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC1.51□□□□□ -2.17
VPS29Q9UBQ0 RPL22P13-201ENST00000493291 347 ntBASIC1.51□□□□□ -2.17
VPS29Q9UBQ0 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC1.51□□□□□ -2.17
VPS29Q9UBQ0 AC116337.1-201ENST00000509680 687 ntBASIC1.51□□□□□ -2.17
VPS29Q9UBQ0 MTCO2P15-201ENST00000532655 656 ntBASIC1.51□□□□□ -2.17
VPS29Q9UBQ0 AP000873.5-201ENST00000533906 236 ntBASIC1.51□□□□□ -2.17
VPS29Q9UBQ0 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC1.51□□□□□ -2.17
VPS29Q9UBQ0 DEFB122-202ENST00000569013 197 ntBASIC1.51□□□□□ -2.17
VPS29Q9UBQ0 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC1.51□□□□□ -2.17
VPS29Q9UBQ0 MIR3683-201ENST00000580847 82 ntBASIC1.51□□□□□ -2.17
VPS29Q9UBQ0 AC090330.1-201ENST00000588646 764 ntBASIC1.51□□□□□ -2.17
VPS29Q9UBQ0 AC104763.2-201ENST00000604179 382 ntBASIC1.51□□□□□ -2.17
VPS29Q9UBQ0 AC100814.1-201ENST00000606963 623 ntBASIC1.51□□□□□ -2.17
VPS29Q9UBQ0 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC1.51□□□□□ -2.17
VPS29Q9UBQ0 MIR5739-201ENST00000619803 80 ntBASIC1.51□□□□□ -2.17
VPS29Q9UBQ0 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC1.51□□□□□ -2.17
VPS29Q9UBQ0 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
VPS29Q9UBQ0 RNU4-42P-201ENST00000364738 142 ntBASIC1.5□□□□□ -2.17
VPS29Q9UBQ0 RNA5SP240-201ENST00000365355 128 ntBASIC1.5□□□□□ -2.17
VPS29Q9UBQ0 RNU6-19P-201ENST00000384718 107 ntBASIC1.5□□□□□ -2.17
VPS29Q9UBQ0 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
VPS29Q9UBQ0 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC1.5□□□□□ -2.17
VPS29Q9UBQ0 AC027644.1-201ENST00000419595 298 ntBASIC1.5□□□□□ -2.17
VPS29Q9UBQ0 IFNA20P-201ENST00000436840 528 ntBASIC1.5□□□□□ -2.17
VPS29Q9UBQ0 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC1.5□□□□□ -2.17
VPS29Q9UBQ0 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC1.5□□□□□ -2.17
VPS29Q9UBQ0 ANKRD20A9P-201ENST00000457997 2978 ntBASIC1.5□□□□□ -2.17
VPS29Q9UBQ0 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC1.5□□□□□ -2.17
VPS29Q9UBQ0 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC1.5□□□□□ -2.17
VPS29Q9UBQ0 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC1.5□□□□□ -2.17
VPS29Q9UBQ0 EEF1A1P37-201ENST00000522748 715 ntBASIC1.5□□□□□ -2.17
VPS29Q9UBQ0 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
VPS29Q9UBQ0 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC1.5□□□□□ -2.17
VPS29Q9UBQ0 ROCK1P1-201ENST00000573767 549 ntBASIC1.5□□□□□ -2.17
VPS29Q9UBQ0 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
VPS29Q9UBQ0 AC009974.1-201ENST00000608881 455 ntBASIC1.5□□□□□ -2.17
VPS29Q9UBQ0 AC020658.4-201ENST00000613987 684 ntBASIC1.5□□□□□ -2.17
VPS29Q9UBQ0 AC091953.2-201ENST00000623979 160 ntBASIC1.5□□□□□ -2.17
VPS29Q9UBQ0 MKKS-204ENST00000639674 192 ntBASIC1.5□□□□□ -2.17
VPS29Q9UBQ0 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC1.5□□□□□ -2.17
VPS29Q9UBQ0 RNU1-72P-201ENST00000362976 153 ntBASIC1.49□□□□□ -2.17
VPS29Q9UBQ0 Y_RNA.245-201ENST00000364493 95 ntBASIC1.49□□□□□ -2.17
VPS29Q9UBQ0 MIR518A2-201ENST00000384966 87 ntBASIC1.49□□□□□ -2.17
VPS29Q9UBQ0 UBE2V1P15-201ENST00000407776 448 ntBASIC1.49□□□□□ -2.17
VPS29Q9UBQ0 OOSP1P1-201ENST00000423265 274 ntBASIC1.49□□□□□ -2.17
VPS29Q9UBQ0 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
VPS29Q9UBQ0 AL445669.1-201ENST00000426743 755 ntBASIC1.49□□□□□ -2.17
VPS29Q9UBQ0 DEFB130D-201ENST00000426866 237 ntBASIC1.49□□□□□ -2.17
VPS29Q9UBQ0 ELOCP14-201ENST00000428070 331 ntBASIC1.49□□□□□ -2.17
VPS29Q9UBQ0 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
VPS29Q9UBQ0 MTCYBP15-201ENST00000433123 1127 ntBASIC1.49□□□□□ -2.17
VPS29Q9UBQ0 ELOCP7-201ENST00000439968 331 ntBASIC1.49□□□□□ -2.17
VPS29Q9UBQ0 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC1.49□□□□□ -2.17
VPS29Q9UBQ0 RPL7P12-201ENST00000446719 750 ntBASIC1.49□□□□□ -2.17
VPS29Q9UBQ0 SEPT14P24-201ENST00000447236 180 ntBASIC1.49□□□□□ -2.17
VPS29Q9UBQ0 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
VPS29Q9UBQ0 MRPL42P4-201ENST00000453267 443 ntBASIC1.49□□□□□ -2.17
VPS29Q9UBQ0 USP9YP10-201ENST00000454868 628 ntBASIC1.49□□□□□ -2.17
VPS29Q9UBQ0 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC1.49□□□□□ -2.17
VPS29Q9UBQ0 CYP2C59P-201ENST00000457790 269 ntBASIC1.49□□□□□ -2.17
VPS29Q9UBQ0 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC1.49□□□□□ -2.17
VPS29Q9UBQ0 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC1.49□□□□□ -2.17
VPS29Q9UBQ0 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
VPS29Q9UBQ0 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC1.49□□□□□ -2.17
VPS29Q9UBQ0 FAM92A1P2-202ENST00000504766 877 ntBASIC1.49□□□□□ -2.17
VPS29Q9UBQ0 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC1.49□□□□□ -2.17
VPS29Q9UBQ0 AP000889.1-201ENST00000530968 660 ntBASIC1.49□□□□□ -2.17
VPS29Q9UBQ0 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC1.49□□□□□ -2.17
VPS29Q9UBQ0 AL139344.1-201ENST00000605228 195 ntBASIC1.49□□□□□ -2.17
VPS29Q9UBQ0 AC116618.1-201ENST00000634617 774 ntBASIC1.49□□□□□ -2.17
VPS29Q9UBQ0 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
VPS29Q9UBQ0 AC002543.1-201ENST00000299783 1954 ntBASIC1.48□□□□□ -2.17
VPS29Q9UBQ0 Z75746.1-201ENST00000440243 2080 ntBASIC1.48□□□□□ -2.17
VPS29Q9UBQ0 RNU6-216P-201ENST00000363282 104 ntBASIC1.48□□□□□ -2.17
VPS29Q9UBQ0 SNORA8-201ENST00000384574 139 ntBASIC1.48□□□□□ -2.17
VPS29Q9UBQ0 BTF3P8-201ENST00000414577 526 ntBASIC1.48□□□□□ -2.17
VPS29Q9UBQ0 AL160275.3-201ENST00000423876 471 ntBASIC1.48□□□□□ -2.17
VPS29Q9UBQ0 PTGES3P4-201ENST00000426243 356 ntBASIC1.48□□□□□ -2.17
VPS29Q9UBQ0 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC1.48□□□□□ -2.17
VPS29Q9UBQ0 AC010153.1-201ENST00000432862 727 ntBASIC1.48□□□□□ -2.17
VPS29Q9UBQ0 NANOGP2-201ENST00000435391 727 ntBASIC1.48□□□□□ -2.17
VPS29Q9UBQ0 MTND1P28-201ENST00000435623 950 ntBASIC1.48□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 114.6 ms