Protein–RNA interactions for Protein: Q9UBK2

PPARGC1A, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha, humanhuman

Known RBP Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1AQ9UBK2 AL022722.2-201ENST00000402519 180 ntBASIC4.24□□□□□ -1.73
PPARGC1AQ9UBK2 Y_RNA.594-201ENST00000410373 140 ntBASIC4.24□□□□□ -1.73
PPARGC1AQ9UBK2 Z99755.1-201ENST00000414048 380 ntBASIC4.24□□□□□ -1.73
PPARGC1AQ9UBK2 AC063979.1-201ENST00000415539 377 ntBASIC4.24□□□□□ -1.73
PPARGC1AQ9UBK2 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC4.24□□□□□ -1.73
PPARGC1AQ9UBK2 AL590632.1-201ENST00000424289 371 ntBASIC4.24□□□□□ -1.73
PPARGC1AQ9UBK2 AC079780.1-201ENST00000428259 207 ntBASIC4.24□□□□□ -1.73
PPARGC1AQ9UBK2 HSFY6P-201ENST00000445573 403 ntBASIC4.24□□□□□ -1.73
PPARGC1AQ9UBK2 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC4.24□□□□□ -1.73
PPARGC1AQ9UBK2 snoU13.24-201ENST00000458998 104 ntBASIC4.24□□□□□ -1.73
PPARGC1AQ9UBK2 RPL7P42-201ENST00000481005 679 ntBASIC4.24□□□□□ -1.73
PPARGC1AQ9UBK2 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC4.24□□□□□ -1.73
PPARGC1AQ9UBK2 Y_RNA.720-201ENST00000517166 92 ntBASIC4.24□□□□□ -1.73
PPARGC1AQ9UBK2 RNU6-1315P-201ENST00000517187 99 ntBASIC4.24□□□□□ -1.73
PPARGC1AQ9UBK2 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC4.24□□□□□ -1.73
PPARGC1AQ9UBK2 AC009229.3-201ENST00000608056 282 ntBASIC4.24□□□□□ -1.73
PPARGC1AQ9UBK2 AC005344.1-201ENST00000613391 459 ntBASIC4.24□□□□□ -1.73
PPARGC1AQ9UBK2 AL161423.1-201ENST00000613700 262 ntBASIC4.24□□□□□ -1.73
PPARGC1AQ9UBK2 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
PPARGC1AQ9UBK2 AC083806.3-201ENST00000614016 455 ntBASIC4.24□□□□□ -1.73
PPARGC1AQ9UBK2 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC4.24□□□□□ -1.73
PPARGC1AQ9UBK2 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC4.24□□□□□ -1.73
PPARGC1AQ9UBK2 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
PPARGC1AQ9UBK2 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
PPARGC1AQ9UBK2 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC4.23□□□□□ -1.73
PPARGC1AQ9UBK2 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
PPARGC1AQ9UBK2 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
PPARGC1AQ9UBK2 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
PPARGC1AQ9UBK2 Y_RNA.5-201ENST00000362334 102 ntBASIC4.23□□□□□ -1.73
PPARGC1AQ9UBK2 RNA5SP513-201ENST00000364648 118 ntBASIC4.23□□□□□ -1.73
PPARGC1AQ9UBK2 RNU6-395P-201ENST00000365662 106 ntBASIC4.23□□□□□ -1.73
PPARGC1AQ9UBK2 RNU6-1032P-201ENST00000384100 107 ntBASIC4.23□□□□□ -1.73
PPARGC1AQ9UBK2 RNU6-890P-201ENST00000384121 107 ntBASIC4.23□□□□□ -1.73
PPARGC1AQ9UBK2 Y_RNA.459-201ENST00000384251 102 ntBASIC4.23□□□□□ -1.73
PPARGC1AQ9UBK2 HSPE1P26-201ENST00000405341 275 ntBASIC4.23□□□□□ -1.73
PPARGC1AQ9UBK2 USMG5P1-201ENST00000425964 177 ntBASIC4.23□□□□□ -1.73
PPARGC1AQ9UBK2 AL451062.2-201ENST00000427515 271 ntBASIC4.23□□□□□ -1.73
PPARGC1AQ9UBK2 AL356867.1-201ENST00000429623 299 ntBASIC4.23□□□□□ -1.73
PPARGC1AQ9UBK2 VDAC1P3-201ENST00000434069 851 ntBASIC4.23□□□□□ -1.73
PPARGC1AQ9UBK2 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC4.23□□□□□ -1.73
PPARGC1AQ9UBK2 NOTCH2P1-201ENST00000443481 624 ntBASIC4.23□□□□□ -1.73
PPARGC1AQ9UBK2 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC4.23□□□□□ -1.73
PPARGC1AQ9UBK2 Y_RNA.670-201ENST00000516255 105 ntBASIC4.23□□□□□ -1.73
PPARGC1AQ9UBK2 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC4.23□□□□□ -1.73
PPARGC1AQ9UBK2 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC4.23□□□□□ -1.73
PPARGC1AQ9UBK2 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC4.23□□□□□ -1.73
PPARGC1AQ9UBK2 MIR1273C-201ENST00000578669 77 ntBASIC4.23□□□□□ -1.73
PPARGC1AQ9UBK2 MIR3671-201ENST00000580455 88 ntBASIC4.23□□□□□ -1.73
PPARGC1AQ9UBK2 MIR4697-201ENST00000582977 78 ntBASIC4.23□□□□□ -1.73
PPARGC1AQ9UBK2 AC005899.2-201ENST00000584353 90 ntBASIC4.23□□□□□ -1.73
PPARGC1AQ9UBK2 MIR5684-201ENST00000585074 65 ntBASIC4.23□□□□□ -1.73
PPARGC1AQ9UBK2 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
PPARGC1AQ9UBK2 AC007938.3-201ENST00000604965 623 ntBASIC4.23□□□□□ -1.73
PPARGC1AQ9UBK2 AC011890.2-201ENST00000613393 294 ntBASIC4.23□□□□□ -1.73
PPARGC1AQ9UBK2 RMST_4.1-201ENST00000616886 107 ntBASIC4.23□□□□□ -1.73
PPARGC1AQ9UBK2 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC4.23□□□□□ -1.73
PPARGC1AQ9UBK2 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
PPARGC1AQ9UBK2 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC4.22□□□□□ -1.73
PPARGC1AQ9UBK2 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
PPARGC1AQ9UBK2 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC4.22□□□□□ -1.73
PPARGC1AQ9UBK2 EFTUD1P2-201ENST00000514817 1603 ntBASIC4.22□□□□□ -1.73
PPARGC1AQ9UBK2 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC4.22□□□□□ -1.73
PPARGC1AQ9UBK2 RNU6-490P-201ENST00000362985 107 ntBASIC4.22□□□□□ -1.73
PPARGC1AQ9UBK2 Y_RNA.148-201ENST00000363557 117 ntBASIC4.22□□□□□ -1.73
PPARGC1AQ9UBK2 Y_RNA.158-201ENST00000363651 101 ntBASIC4.22□□□□□ -1.73
PPARGC1AQ9UBK2 SNORA37-201ENST00000384504 129 ntBASIC4.22□□□□□ -1.73
PPARGC1AQ9UBK2 MIR578-201ENST00000384828 96 ntBASIC4.22□□□□□ -1.73
PPARGC1AQ9UBK2 RNU6-308P-201ENST00000390957 107 ntBASIC4.22□□□□□ -1.73
PPARGC1AQ9UBK2 AL356095.1-201ENST00000417217 199 ntBASIC4.22□□□□□ -1.73
PPARGC1AQ9UBK2 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC4.22□□□□□ -1.73
PPARGC1AQ9UBK2 NDUFB4P7-201ENST00000423198 363 ntBASIC4.22□□□□□ -1.73
PPARGC1AQ9UBK2 AL358472.1-201ENST00000431295 329 ntBASIC4.22□□□□□ -1.73
PPARGC1AQ9UBK2 AC236972.1-201ENST00000433225 199 ntBASIC4.22□□□□□ -1.73
PPARGC1AQ9UBK2 AC091390.1-201ENST00000433904 331 ntBASIC4.22□□□□□ -1.73
PPARGC1AQ9UBK2 RPL21P23-201ENST00000446654 460 ntBASIC4.22□□□□□ -1.73
PPARGC1AQ9UBK2 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC4.22□□□□□ -1.73
PPARGC1AQ9UBK2 MIR2053-201ENST00000459295 91 ntBASIC4.22□□□□□ -1.73
PPARGC1AQ9UBK2 FPGT-203ENST00000467578 601 ntTSL 2 BASIC4.22□□□□□ -1.73
PPARGC1AQ9UBK2 AC010285.1-201ENST00000470580 392 ntBASIC4.22□□□□□ -1.73
PPARGC1AQ9UBK2 RN7SL860P-201ENST00000473738 223 ntBASIC4.22□□□□□ -1.73
PPARGC1AQ9UBK2 RPS4XP13-201ENST00000483219 789 ntBASIC4.22□□□□□ -1.73
PPARGC1AQ9UBK2 RN7SL271P-201ENST00000487601 295 ntBASIC4.22□□□□□ -1.73
PPARGC1AQ9UBK2 RPL29P14-201ENST00000495837 428 ntBASIC4.22□□□□□ -1.73
PPARGC1AQ9UBK2 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
PPARGC1AQ9UBK2 AL359273.1-201ENST00000510918 627 ntBASIC4.22□□□□□ -1.73
PPARGC1AQ9UBK2 RNU7-143P-201ENST00000516781 65 ntBASIC4.22□□□□□ -1.73
PPARGC1AQ9UBK2 RNU6-1213P-201ENST00000517075 94 ntBASIC4.22□□□□□ -1.73
PPARGC1AQ9UBK2 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC4.22□□□□□ -1.73
PPARGC1AQ9UBK2 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC4.22□□□□□ -1.73
PPARGC1AQ9UBK2 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC4.22□□□□□ -1.73
PPARGC1AQ9UBK2 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC4.22□□□□□ -1.73
PPARGC1AQ9UBK2 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC4.22□□□□□ -1.73
PPARGC1AQ9UBK2 AC098826.3-201ENST00000603823 466 ntBASIC4.22□□□□□ -1.73
PPARGC1AQ9UBK2 AL591034.3-201ENST00000605511 685 ntBASIC4.22□□□□□ -1.73
PPARGC1AQ9UBK2 AC091925.1-201ENST00000623204 462 ntBASIC4.22□□□□□ -1.73
PPARGC1AQ9UBK2 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC4.22□□□□□ -1.73
PPARGC1AQ9UBK2 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
PPARGC1AQ9UBK2 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC4.22□□□□□ -1.73
PPARGC1AQ9UBK2 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
PPARGC1AQ9UBK2 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 85.5 ms