Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC2.17□□□□□ -2.06
CLCF1Q9UBD9 SNORD97-201ENST00000459187 142 ntBASIC2.17□□□□□ -2.06
CLCF1Q9UBD9 RPL30P6-201ENST00000475925 342 ntBASIC2.17□□□□□ -2.06
CLCF1Q9UBD9 RPL31P41-201ENST00000477967 372 ntBASIC2.17□□□□□ -2.06
CLCF1Q9UBD9 RN7SL636P-201ENST00000497504 294 ntBASIC2.17□□□□□ -2.06
CLCF1Q9UBD9 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC2.17□□□□□ -2.06
CLCF1Q9UBD9 AC113155.1-201ENST00000511141 769 ntBASIC2.17□□□□□ -2.06
CLCF1Q9UBD9 AC008413.1-201ENST00000511864 177 ntBASIC2.17□□□□□ -2.06
CLCF1Q9UBD9 AC022616.6-201ENST00000520479 119 ntBASIC2.17□□□□□ -2.06
CLCF1Q9UBD9 VBP1-203ENST00000535916 944 ntTSL 2 BASIC2.17□□□□□ -2.06
CLCF1Q9UBD9 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC2.17□□□□□ -2.06
CLCF1Q9UBD9 MRPS36P5-201ENST00000551909 298 ntBASIC2.17□□□□□ -2.06
CLCF1Q9UBD9 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC2.17□□□□□ -2.06
CLCF1Q9UBD9 RPS3AP4-201ENST00000555161 764 ntBASIC2.17□□□□□ -2.06
CLCF1Q9UBD9 AL359212.1-201ENST00000556608 614 ntBASIC2.17□□□□□ -2.06
CLCF1Q9UBD9 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC2.17□□□□□ -2.06
CLCF1Q9UBD9 AC010546.1-201ENST00000569391 485 ntBASIC2.17□□□□□ -2.06
CLCF1Q9UBD9 MIR3945-201ENST00000581853 98 ntBASIC2.17□□□□□ -2.06
CLCF1Q9UBD9 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC2.17□□□□□ -2.06
CLCF1Q9UBD9 AL670379.6-201ENST00000603753 252 ntBASIC2.17□□□□□ -2.06
CLCF1Q9UBD9 AL670379.11-201ENST00000604059 253 ntBASIC2.17□□□□□ -2.06
CLCF1Q9UBD9 AC008162.1-201ENST00000604718 254 ntBASIC2.17□□□□□ -2.06
CLCF1Q9UBD9 AL670379.1-201ENST00000604752 252 ntBASIC2.17□□□□□ -2.06
CLCF1Q9UBD9 AC019159.1-201ENST00000605094 187 ntBASIC2.17□□□□□ -2.06
CLCF1Q9UBD9 AL670379.5-201ENST00000605253 252 ntBASIC2.17□□□□□ -2.06
CLCF1Q9UBD9 AL670379.12-201ENST00000605291 253 ntBASIC2.17□□□□□ -2.06
CLCF1Q9UBD9 AL670379.8-201ENST00000605353 252 ntBASIC2.17□□□□□ -2.06
CLCF1Q9UBD9 AL670379.7-201ENST00000605823 252 ntBASIC2.17□□□□□ -2.06
CLCF1Q9UBD9 AC018638.7-201ENST00000605836 1114 ntBASIC2.17□□□□□ -2.06
CLCF1Q9UBD9 AC108747.1-201ENST00000609508 535 ntBASIC2.17□□□□□ -2.06
CLCF1Q9UBD9 AC009159.2-201ENST00000617603 606 ntBASIC2.17□□□□□ -2.06
CLCF1Q9UBD9 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC2.17□□□□□ -2.06
CLCF1Q9UBD9 AP002791.1-201ENST00000623291 381 ntBASIC2.17□□□□□ -2.06
CLCF1Q9UBD9 AC010297.1-201ENST00000623948 149 ntBASIC2.17□□□□□ -2.06
CLCF1Q9UBD9 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC2.17□□□□□ -2.06
CLCF1Q9UBD9 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
CLCF1Q9UBD9 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC2.16□□□□□ -2.06
CLCF1Q9UBD9 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.16□□□□□ -2.06
CLCF1Q9UBD9 OFD1P6Y-202ENST00000451061 2724 ntBASIC2.16□□□□□ -2.06
CLCF1Q9UBD9 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC2.16□□□□□ -2.06
CLCF1Q9UBD9 UBE2L2-201ENST00000254302 429 ntBASIC2.16□□□□□ -2.06
CLCF1Q9UBD9 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
CLCF1Q9UBD9 RNU6-701P-201ENST00000384059 107 ntBASIC2.16□□□□□ -2.06
CLCF1Q9UBD9 AL139397.2-201ENST00000404529 772 ntBASIC2.16□□□□□ -2.06
CLCF1Q9UBD9 AL021407.1-201ENST00000404531 386 ntBASIC2.16□□□□□ -2.06
CLCF1Q9UBD9 AL162578.1-201ENST00000406202 378 ntBASIC2.16□□□□□ -2.06
CLCF1Q9UBD9 RNU2-68P-201ENST00000410878 191 ntBASIC2.16□□□□□ -2.06
CLCF1Q9UBD9 NDUFS5P4-201ENST00000412983 318 ntBASIC2.16□□□□□ -2.06
CLCF1Q9UBD9 RAC1P6-201ENST00000423911 575 ntBASIC2.16□□□□□ -2.06
CLCF1Q9UBD9 RPS15AP5-201ENST00000436276 388 ntBASIC2.16□□□□□ -2.06
CLCF1Q9UBD9 RBM43P1-201ENST00000476891 1081 ntBASIC2.16□□□□□ -2.06
CLCF1Q9UBD9 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC2.16□□□□□ -2.06
CLCF1Q9UBD9 SEM1P1-201ENST00000506694 209 ntBASIC2.16□□□□□ -2.06
CLCF1Q9UBD9 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC2.16□□□□□ -2.06
CLCF1Q9UBD9 MTND1P22-201ENST00000510572 951 ntBASIC2.16□□□□□ -2.06
CLCF1Q9UBD9 AF131216.2-201ENST00000512316 564 ntBASIC2.16□□□□□ -2.06
CLCF1Q9UBD9 RNA5SP24-201ENST00000516478 95 ntBASIC2.16□□□□□ -2.06
CLCF1Q9UBD9 RNA5SP471-201ENST00000516971 106 ntBASIC2.16□□□□□ -2.06
CLCF1Q9UBD9 RNA5SP165-201ENST00000517142 115 ntBASIC2.16□□□□□ -2.06
CLCF1Q9UBD9 HMGB1P41-201ENST00000520234 440 ntBASIC2.16□□□□□ -2.06
CLCF1Q9UBD9 NACAP3-201ENST00000552100 481 ntBASIC2.16□□□□□ -2.06
CLCF1Q9UBD9 AC008015.1-201ENST00000555505 465 ntBASIC2.16□□□□□ -2.06
CLCF1Q9UBD9 ZNF519P3-201ENST00000557158 1032 ntBASIC2.16□□□□□ -2.06
CLCF1Q9UBD9 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC2.16□□□□□ -2.06
CLCF1Q9UBD9 SNORD53-201ENST00000579969 78 ntBASIC2.16□□□□□ -2.06
CLCF1Q9UBD9 AL359999.1-201ENST00000604513 294 ntBASIC2.16□□□□□ -2.06
CLCF1Q9UBD9 AL391813.2-201ENST00000609113 322 ntBASIC2.16□□□□□ -2.06
CLCF1Q9UBD9 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC2.16□□□□□ -2.06
CLCF1Q9UBD9 MIR1291-201ENST00000627649 87 ntBASIC2.16□□□□□ -2.06
CLCF1Q9UBD9 AC092104.1-201ENST00000497346 1441 ntBASIC2.16□□□□□ -2.06
CLCF1Q9UBD9 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.16□□□□□ -2.06
CLCF1Q9UBD9 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.06
CLCF1Q9UBD9 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC2.15□□□□□ -2.06
CLCF1Q9UBD9 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC2.15□□□□□ -2.06
CLCF1Q9UBD9 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.15□□□□□ -2.07
CLCF1Q9UBD9 RNU5F-7P-201ENST00000363696 115 ntBASIC2.15□□□□□ -2.07
CLCF1Q9UBD9 RNU6-512P-201ENST00000364438 103 ntBASIC2.15□□□□□ -2.07
CLCF1Q9UBD9 FO393413.1-201ENST00000402892 195 ntBASIC2.15□□□□□ -2.07
CLCF1Q9UBD9 ISCA1P1-201ENST00000426679 387 ntBASIC2.15□□□□□ -2.07
CLCF1Q9UBD9 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC2.15□□□□□ -2.07
CLCF1Q9UBD9 HMGB1P9-201ENST00000429856 646 ntBASIC2.15□□□□□ -2.07
CLCF1Q9UBD9 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.15□□□□□ -2.07
CLCF1Q9UBD9 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC2.15□□□□□ -2.07
CLCF1Q9UBD9 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC2.15□□□□□ -2.07
CLCF1Q9UBD9 NEFMP1-201ENST00000443423 1006 ntBASIC2.15□□□□□ -2.07
CLCF1Q9UBD9 AL590365.1-201ENST00000450788 243 ntBASIC2.15□□□□□ -2.07
CLCF1Q9UBD9 ZNF114P1-201ENST00000453500 292 ntBASIC2.15□□□□□ -2.07
CLCF1Q9UBD9 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC2.15□□□□□ -2.07
CLCF1Q9UBD9 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC2.15□□□□□ -2.07
CLCF1Q9UBD9 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC2.15□□□□□ -2.07
CLCF1Q9UBD9 RPS29P20-201ENST00000489592 171 ntBASIC2.15□□□□□ -2.07
CLCF1Q9UBD9 AC005178.1-201ENST00000508392 440 ntBASIC2.15□□□□□ -2.07
CLCF1Q9UBD9 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC2.15□□□□□ -2.07
CLCF1Q9UBD9 AC008549.1-201ENST00000512900 643 ntBASIC2.15□□□□□ -2.07
CLCF1Q9UBD9 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC2.15□□□□□ -2.07
CLCF1Q9UBD9 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC2.15□□□□□ -2.07
CLCF1Q9UBD9 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC2.15□□□□□ -2.07
CLCF1Q9UBD9 AP006587.4-201ENST00000526053 529 ntBASIC2.15□□□□□ -2.07
CLCF1Q9UBD9 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC2.15□□□□□ -2.07
CLCF1Q9UBD9 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC2.15□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 81.2 ms