Protein–RNA interactions for Protein: Q9NX63

CHCHD3, MICOS complex subunit MIC19, humanhuman

Known RBP Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3Q9NX63 AL445584.1-201ENST00000431451 330 ntBASIC2.81□□□□□ -1.96
CHCHD3Q9NX63 RPL23AP30-201ENST00000432419 501 ntBASIC2.81□□□□□ -1.96
CHCHD3Q9NX63 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC2.81□□□□□ -1.96
CHCHD3Q9NX63 AC098826.1-201ENST00000433943 471 ntBASIC2.81□□□□□ -1.96
CHCHD3Q9NX63 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC2.81□□□□□ -1.96
CHCHD3Q9NX63 AC073614.1-201ENST00000438690 650 ntBASIC2.81□□□□□ -1.96
CHCHD3Q9NX63 NANOGNBP1-201ENST00000448444 480 ntBASIC2.81□□□□□ -1.96
CHCHD3Q9NX63 RAB9AP1-201ENST00000449393 573 ntBASIC2.81□□□□□ -1.96
CHCHD3Q9NX63 ELOCP23-201ENST00000452014 332 ntBASIC2.81□□□□□ -1.96
CHCHD3Q9NX63 NIPA2P5-201ENST00000452282 464 ntBASIC2.81□□□□□ -1.96
CHCHD3Q9NX63 OARD1-209ENST00000471367 401 ntTSL 2 BASIC2.81□□□□□ -1.96
CHCHD3Q9NX63 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC2.81□□□□□ -1.96
CHCHD3Q9NX63 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC2.81□□□□□ -1.96
CHCHD3Q9NX63 AC109927.2-201ENST00000506416 303 ntBASIC2.81□□□□□ -1.96
CHCHD3Q9NX63 HMGB3P3-201ENST00000510526 400 ntBASIC2.81□□□□□ -1.96
CHCHD3Q9NX63 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.81□□□□□ -1.96
CHCHD3Q9NX63 SNORA31.18-201ENST00000517043 134 ntBASIC2.81□□□□□ -1.96
CHCHD3Q9NX63 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC2.81□□□□□ -1.96
CHCHD3Q9NX63 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC2.81□□□□□ -1.96
CHCHD3Q9NX63 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.81□□□□□ -1.96
CHCHD3Q9NX63 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC2.81□□□□□ -1.96
CHCHD3Q9NX63 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC2.81□□□□□ -1.96
CHCHD3Q9NX63 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC2.81□□□□□ -1.96
CHCHD3Q9NX63 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC2.81□□□□□ -1.96
CHCHD3Q9NX63 AC021739.1-201ENST00000559631 174 ntBASIC2.81□□□□□ -1.96
CHCHD3Q9NX63 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC2.81□□□□□ -1.96
CHCHD3Q9NX63 MIR4782-201ENST00000577987 79 ntBASIC2.81□□□□□ -1.96
CHCHD3Q9NX63 MIR1273C-201ENST00000578669 77 ntBASIC2.81□□□□□ -1.96
CHCHD3Q9NX63 AC024619.4-201ENST00000580924 316 ntBASIC2.81□□□□□ -1.96
CHCHD3Q9NX63 MIR3605-201ENST00000583214 100 ntBASIC2.81□□□□□ -1.96
CHCHD3Q9NX63 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC2.81□□□□□ -1.96
CHCHD3Q9NX63 NRBF2P5-201ENST00000603087 788 ntBASIC2.81□□□□□ -1.96
CHCHD3Q9NX63 AC073657.2-201ENST00000605661 303 ntBASIC2.81□□□□□ -1.96
CHCHD3Q9NX63 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC2.81□□□□□ -1.96
CHCHD3Q9NX63 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC2.81□□□□□ -1.96
CHCHD3Q9NX63 Z99571.1-201ENST00000636677 394 ntBASIC2.81□□□□□ -1.96
CHCHD3Q9NX63 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC2.81□□□□□ -1.96
CHCHD3Q9NX63 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.81□□□□□ -1.96
CHCHD3Q9NX63 IL33-202ENST00000417746 2327 ntTSL 2 BASIC2.81□□□□□ -1.96
CHCHD3Q9NX63 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC2.81□□□□□ -1.96
CHCHD3Q9NX63 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
CHCHD3Q9NX63 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
CHCHD3Q9NX63 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
CHCHD3Q9NX63 RNA5SP50-201ENST00000363731 107 ntBASIC2.8□□□□□ -1.96
CHCHD3Q9NX63 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
CHCHD3Q9NX63 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
CHCHD3Q9NX63 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC2.8□□□□□ -1.96
CHCHD3Q9NX63 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC2.8□□□□□ -1.96
CHCHD3Q9NX63 AL158156.1-201ENST00000422509 473 ntBASIC2.8□□□□□ -1.96
CHCHD3Q9NX63 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC2.8□□□□□ -1.96
CHCHD3Q9NX63 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC2.8□□□□□ -1.96
CHCHD3Q9NX63 AC079781.2-201ENST00000446424 169 ntBASIC2.8□□□□□ -1.96
CHCHD3Q9NX63 DPPA3P1-201ENST00000448050 469 ntBASIC2.8□□□□□ -1.96
CHCHD3Q9NX63 RBMY2UP-201ENST00000453474 324 ntBASIC2.8□□□□□ -1.96
CHCHD3Q9NX63 AC098591.2-201ENST00000510152 315 ntBASIC2.8□□□□□ -1.96
CHCHD3Q9NX63 MEPE-206ENST00000511670 550 ntTSL 4 BASIC2.8□□□□□ -1.96
CHCHD3Q9NX63 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC2.8□□□□□ -1.96
CHCHD3Q9NX63 SCARNA13-201ENST00000516672 275 ntBASIC2.8□□□□□ -1.96
CHCHD3Q9NX63 RNU2-46P-201ENST00000517038 113 ntBASIC2.8□□□□□ -1.96
CHCHD3Q9NX63 IGLV3-17-201ENST00000519099 244 ntBASIC2.8□□□□□ -1.96
CHCHD3Q9NX63 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC2.8□□□□□ -1.96
CHCHD3Q9NX63 AC022616.3-201ENST00000523940 148 ntBASIC2.8□□□□□ -1.96
CHCHD3Q9NX63 AL157871.3-201ENST00000557231 293 ntBASIC2.8□□□□□ -1.96
CHCHD3Q9NX63 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC2.8□□□□□ -1.96
CHCHD3Q9NX63 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC2.8□□□□□ -1.96
CHCHD3Q9NX63 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC2.8□□□□□ -1.96
CHCHD3Q9NX63 Z99497.2-201ENST00000603634 310 ntBASIC2.8□□□□□ -1.96
CHCHD3Q9NX63 AC025811.1-201ENST00000604312 472 ntBASIC2.8□□□□□ -1.96
CHCHD3Q9NX63 AL449363.1-201ENST00000617815 186 ntBASIC2.8□□□□□ -1.96
CHCHD3Q9NX63 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC2.8□□□□□ -1.96
CHCHD3Q9NX63 MIR203B-201ENST00000636080 86 ntBASIC2.8□□□□□ -1.96
CHCHD3Q9NX63 MIR3974-201ENST00000637126 96 ntBASIC2.8□□□□□ -1.96
CHCHD3Q9NX63 AC009093.8-201ENST00000641769 292 ntBASIC2.8□□□□□ -1.96
CHCHD3Q9NX63 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC2.8□□□□□ -1.96
CHCHD3Q9NX63 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
CHCHD3Q9NX63 U8.3-201ENST00000363321 132 ntBASIC2.79□□□□□ -1.96
CHCHD3Q9NX63 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
CHCHD3Q9NX63 MIR592-201ENST00000384959 97 ntBASIC2.79□□□□□ -1.96
CHCHD3Q9NX63 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
CHCHD3Q9NX63 U3.26-201ENST00000391236 204 ntBASIC2.79□□□□□ -1.96
CHCHD3Q9NX63 AC127391.1-201ENST00000411737 98 ntBASIC2.79□□□□□ -1.96
CHCHD3Q9NX63 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC2.79□□□□□ -1.96
CHCHD3Q9NX63 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC2.79□□□□□ -1.96
CHCHD3Q9NX63 AC090960.1-201ENST00000421072 306 ntBASIC2.79□□□□□ -1.96
CHCHD3Q9NX63 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.79□□□□□ -1.96
CHCHD3Q9NX63 AC009961.2-201ENST00000435771 251 ntBASIC2.79□□□□□ -1.96
CHCHD3Q9NX63 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC2.79□□□□□ -1.96
CHCHD3Q9NX63 RPL21P23-201ENST00000446654 460 ntBASIC2.79□□□□□ -1.96
CHCHD3Q9NX63 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC2.79□□□□□ -1.96
CHCHD3Q9NX63 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC2.79□□□□□ -1.96
CHCHD3Q9NX63 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC2.79□□□□□ -1.96
CHCHD3Q9NX63 AC133134.1-201ENST00000466800 359 ntBASIC2.79□□□□□ -1.96
CHCHD3Q9NX63 RAP1BP2-201ENST00000478270 544 ntBASIC2.79□□□□□ -1.96
CHCHD3Q9NX63 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC2.79□□□□□ -1.96
CHCHD3Q9NX63 AC010486.3-201ENST00000511602 785 ntBASIC2.79□□□□□ -1.96
CHCHD3Q9NX63 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC2.79□□□□□ -1.96
CHCHD3Q9NX63 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC2.79□□□□□ -1.96
CHCHD3Q9NX63 AC090136.1-201ENST00000520009 240 ntBASIC2.79□□□□□ -1.96
CHCHD3Q9NX63 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC2.79□□□□□ -1.96
CHCHD3Q9NX63 AP002453.2-201ENST00000533503 320 ntBASIC2.79□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 90.8 ms