Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC3.2□□□□□ -1.9
BLOC1S4Q9NUP1 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC3.2□□□□□ -1.9
BLOC1S4Q9NUP1 AC009961.2-201ENST00000435771 251 ntBASIC3.2□□□□□ -1.9
BLOC1S4Q9NUP1 AC104850.1-201ENST00000435940 476 ntBASIC3.2□□□□□ -1.9
BLOC1S4Q9NUP1 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC3.2□□□□□ -1.9
BLOC1S4Q9NUP1 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC3.2□□□□□ -1.9
BLOC1S4Q9NUP1 AC009296.1-201ENST00000443146 155 ntBASIC3.2□□□□□ -1.9
BLOC1S4Q9NUP1 AC079781.2-201ENST00000446424 169 ntBASIC3.2□□□□□ -1.9
BLOC1S4Q9NUP1 DPPA3P1-201ENST00000448050 469 ntBASIC3.2□□□□□ -1.9
BLOC1S4Q9NUP1 MTND1P27-201ENST00000451117 902 ntBASIC3.2□□□□□ -1.9
BLOC1S4Q9NUP1 NIPA2P5-201ENST00000452282 464 ntBASIC3.2□□□□□ -1.9
BLOC1S4Q9NUP1 OARD1-209ENST00000471367 401 ntTSL 2 BASIC3.2□□□□□ -1.9
BLOC1S4Q9NUP1 TRBV1-201ENST00000476502 284 ntBASIC3.2□□□□□ -1.9
BLOC1S4Q9NUP1 RAP1BP2-201ENST00000478270 544 ntBASIC3.2□□□□□ -1.9
BLOC1S4Q9NUP1 AC139453.3-201ENST00000493276 369 ntBASIC3.2□□□□□ -1.9
BLOC1S4Q9NUP1 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC3.2□□□□□ -1.9
BLOC1S4Q9NUP1 AC098591.2-201ENST00000510152 315 ntBASIC3.2□□□□□ -1.9
BLOC1S4Q9NUP1 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC3.2□□□□□ -1.9
BLOC1S4Q9NUP1 AC119751.5-201ENST00000514077 770 ntBASIC3.2□□□□□ -1.9
BLOC1S4Q9NUP1 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC3.2□□□□□ -1.9
BLOC1S4Q9NUP1 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC3.2□□□□□ -1.9
BLOC1S4Q9NUP1 SNORA70.24-201ENST00000517233 118 ntBASIC3.2□□□□□ -1.9
BLOC1S4Q9NUP1 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC3.2□□□□□ -1.9
BLOC1S4Q9NUP1 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.2□□□□□ -1.9
BLOC1S4Q9NUP1 AL157871.3-201ENST00000557231 293 ntBASIC3.2□□□□□ -1.9
BLOC1S4Q9NUP1 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC3.2□□□□□ -1.9
BLOC1S4Q9NUP1 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC3.2□□□□□ -1.9
BLOC1S4Q9NUP1 AC245014.2-201ENST00000603689 287 ntBASIC3.2□□□□□ -1.9
BLOC1S4Q9NUP1 AC246785.4-201ENST00000605374 287 ntBASIC3.2□□□□□ -1.9
BLOC1S4Q9NUP1 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
BLOC1S4Q9NUP1 AC090115.4-201ENST00000609970 188 ntBASIC3.2□□□□□ -1.9
BLOC1S4Q9NUP1 AC138649.3-201ENST00000622154 254 ntBASIC3.2□□□□□ -1.9
BLOC1S4Q9NUP1 CU459211.1-201ENST00000635667 749 ntBASIC3.2□□□□□ -1.9
BLOC1S4Q9NUP1 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC3.2□□□□□ -1.9
BLOC1S4Q9NUP1 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC3.2□□□□□ -1.9
BLOC1S4Q9NUP1 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
BLOC1S4Q9NUP1 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
BLOC1S4Q9NUP1 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
BLOC1S4Q9NUP1 OR5J1P-201ENST00000313544 939 ntBASIC3.19□□□□□ -1.9
BLOC1S4Q9NUP1 Y_RNA.33-201ENST00000362591 102 ntBASIC3.19□□□□□ -1.9
BLOC1S4Q9NUP1 RNU6-1083P-201ENST00000384022 107 ntBASIC3.19□□□□□ -1.9
BLOC1S4Q9NUP1 MIR181A2-201ENST00000384863 110 ntBASIC3.19□□□□□ -1.9
BLOC1S4Q9NUP1 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC3.19□□□□□ -1.9
BLOC1S4Q9NUP1 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC3.19□□□□□ -1.9
BLOC1S4Q9NUP1 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC3.19□□□□□ -1.9
BLOC1S4Q9NUP1 GAPDHP17-201ENST00000449858 1001 ntBASIC3.19□□□□□ -1.9
BLOC1S4Q9NUP1 AC011825.1-201ENST00000484967 388 ntBASIC3.19□□□□□ -1.9
BLOC1S4Q9NUP1 RN7SL283P-201ENST00000489055 303 ntBASIC3.19□□□□□ -1.9
BLOC1S4Q9NUP1 AC092185.1-201ENST00000491371 97 ntBASIC3.19□□□□□ -1.9
BLOC1S4Q9NUP1 AC026427.2-201ENST00000506228 536 ntBASIC3.19□□□□□ -1.9
BLOC1S4Q9NUP1 AC108078.2-201ENST00000510750 236 ntBASIC3.19□□□□□ -1.9
BLOC1S4Q9NUP1 SCGB1D5P-201ENST00000515134 247 ntBASIC3.19□□□□□ -1.9
BLOC1S4Q9NUP1 RNU6-410P-201ENST00000517006 107 ntBASIC3.19□□□□□ -1.9
BLOC1S4Q9NUP1 SNORA31.18-201ENST00000517043 134 ntBASIC3.19□□□□□ -1.9
BLOC1S4Q9NUP1 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC3.19□□□□□ -1.9
BLOC1S4Q9NUP1 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC3.19□□□□□ -1.9
BLOC1S4Q9NUP1 AP003072.2-201ENST00000527756 676 ntBASIC3.19□□□□□ -1.9
BLOC1S4Q9NUP1 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC3.19□□□□□ -1.9
BLOC1S4Q9NUP1 AC012414.6-201ENST00000568241 401 ntBASIC3.19□□□□□ -1.9
BLOC1S4Q9NUP1 MIR3167-201ENST00000579623 85 ntBASIC3.19□□□□□ -1.9
BLOC1S4Q9NUP1 MIR3616-201ENST00000584070 92 ntBASIC3.19□□□□□ -1.9
BLOC1S4Q9NUP1 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC3.19□□□□□ -1.9
BLOC1S4Q9NUP1 AL451007.1-201ENST00000595491 289 ntBASIC3.19□□□□□ -1.9
BLOC1S4Q9NUP1 AC090578.1-201ENST00000604955 591 ntBASIC3.19□□□□□ -1.9
BLOC1S4Q9NUP1 MIR15A-201ENST00000607334 83 ntBASIC3.19□□□□□ -1.9
BLOC1S4Q9NUP1 AL158063.1-201ENST00000615349 536 ntBASIC3.19□□□□□ -1.9
BLOC1S4Q9NUP1 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
BLOC1S4Q9NUP1 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC3.18□□□□□ -1.9
BLOC1S4Q9NUP1 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
BLOC1S4Q9NUP1 AC004944.1-201ENST00000517807 3059 ntBASIC3.18□□□□□ -1.9
BLOC1S4Q9NUP1 SNORD56.5-201ENST00000364281 72 ntBASIC3.18□□□□□ -1.9
BLOC1S4Q9NUP1 RNU6-1180P-201ENST00000364935 107 ntBASIC3.18□□□□□ -1.9
BLOC1S4Q9NUP1 SNORA18.3-201ENST00000384122 132 ntBASIC3.18□□□□□ -1.9
BLOC1S4Q9NUP1 RNU6-851P-201ENST00000384565 107 ntBASIC3.18□□□□□ -1.9
BLOC1S4Q9NUP1 MIR491-201ENST00000384877 84 ntBASIC3.18□□□□□ -1.9
BLOC1S4Q9NUP1 MIR512-1-201ENST00000384913 84 ntBASIC3.18□□□□□ -1.9
BLOC1S4Q9NUP1 MIR128-1-201ENST00000384921 82 ntBASIC3.18□□□□□ -1.9
BLOC1S4Q9NUP1 SNORA48.2-201ENST00000390926 124 ntBASIC3.18□□□□□ -1.9
BLOC1S4Q9NUP1 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
BLOC1S4Q9NUP1 AL513475.1-201ENST00000406602 315 ntBASIC3.18□□□□□ -1.9
BLOC1S4Q9NUP1 EEF1A1P41-201ENST00000414667 207 ntBASIC3.18□□□□□ -1.9
BLOC1S4Q9NUP1 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC3.18□□□□□ -1.9
BLOC1S4Q9NUP1 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.18□□□□□ -1.9
BLOC1S4Q9NUP1 AC009969.1-201ENST00000438726 172 ntBASIC3.18□□□□□ -1.9
BLOC1S4Q9NUP1 RPS3AP12-201ENST00000443616 753 ntBASIC3.18□□□□□ -1.9
BLOC1S4Q9NUP1 UBBP3-201ENST00000445497 241 ntBASIC3.18□□□□□ -1.9
BLOC1S4Q9NUP1 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC3.18□□□□□ -1.9
BLOC1S4Q9NUP1 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC3.18□□□□□ -1.9
BLOC1S4Q9NUP1 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC3.18□□□□□ -1.9
BLOC1S4Q9NUP1 AC083906.5-201ENST00000503722 328 ntBASIC3.18□□□□□ -1.9
BLOC1S4Q9NUP1 RNU5F-8P-201ENST00000515941 111 ntBASIC3.18□□□□□ -1.9
BLOC1S4Q9NUP1 SNORA18.6-201ENST00000516792 115 ntBASIC3.18□□□□□ -1.9
BLOC1S4Q9NUP1 RNU6-1183P-201ENST00000517054 60 ntBASIC3.18□□□□□ -1.9
BLOC1S4Q9NUP1 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC3.18□□□□□ -1.9
BLOC1S4Q9NUP1 COX6CP5-201ENST00000527162 228 ntBASIC3.18□□□□□ -1.9
BLOC1S4Q9NUP1 OR5B19P-201ENST00000531766 928 ntBASIC3.18□□□□□ -1.9
BLOC1S4Q9NUP1 AC006199.1-201ENST00000548728 219 ntBASIC3.18□□□□□ -1.9
BLOC1S4Q9NUP1 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC3.18□□□□□ -1.9
BLOC1S4Q9NUP1 AC103810.1-201ENST00000579873 453 ntBASIC3.18□□□□□ -1.9
BLOC1S4Q9NUP1 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC3.18□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 85.1 ms