Protein–RNA interactions for Protein: Q9NTJ3

SMC4, Structural maintenance of chromosomes protein 4, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4Q9NTJ3 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC3.46□□□□□ -1.86
SMC4Q9NTJ3 AC090136.1-201ENST00000520009 240 ntBASIC3.46□□□□□ -1.86
SMC4Q9NTJ3 SUB1P1-201ENST00000524415 382 ntBASIC3.46□□□□□ -1.86
SMC4Q9NTJ3 RSL24D1P11-201ENST00000591045 491 ntBASIC3.46□□□□□ -1.86
SMC4Q9NTJ3 AC174048.1-201ENST00000603389 144 ntBASIC3.46□□□□□ -1.86
SMC4Q9NTJ3 AL359198.2-201ENST00000611836 194 ntBASIC3.46□□□□□ -1.86
SMC4Q9NTJ3 AC091304.9-201ENST00000612091 226 ntBASIC3.46□□□□□ -1.86
SMC4Q9NTJ3 AC007998.5-201ENST00000622938 237 ntBASIC3.46□□□□□ -1.86
SMC4Q9NTJ3 CR381653.2-201ENST00000624041 768 ntBASIC3.46□□□□□ -1.86
SMC4Q9NTJ3 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC3.46□□□□□ -1.86
SMC4Q9NTJ3 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
SMC4Q9NTJ3 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC3.46□□□□□ -1.86
SMC4Q9NTJ3 AL390237.1-201ENST00000404226 1415 ntBASIC3.45□□□□□ -1.86
SMC4Q9NTJ3 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
SMC4Q9NTJ3 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
SMC4Q9NTJ3 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
SMC4Q9NTJ3 Y_RNA.51-201ENST00000362725 102 ntBASIC3.45□□□□□ -1.86
SMC4Q9NTJ3 RPL23AP32-201ENST00000395315 459 ntBASIC3.45□□□□□ -1.86
SMC4Q9NTJ3 AL356057.3-201ENST00000402607 340 ntBASIC3.45□□□□□ -1.86
SMC4Q9NTJ3 MIR1289-1-201ENST00000408836 144 ntBASIC3.45□□□□□ -1.86
SMC4Q9NTJ3 HMGN1P14-201ENST00000412459 517 ntBASIC3.45□□□□□ -1.86
SMC4Q9NTJ3 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC3.45□□□□□ -1.86
SMC4Q9NTJ3 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC3.45□□□□□ -1.86
SMC4Q9NTJ3 AL589872.1-201ENST00000426602 288 ntBASIC3.45□□□□□ -1.86
SMC4Q9NTJ3 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC3.45□□□□□ -1.86
SMC4Q9NTJ3 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC3.45□□□□□ -1.86
SMC4Q9NTJ3 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC3.45□□□□□ -1.86
SMC4Q9NTJ3 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC3.45□□□□□ -1.86
SMC4Q9NTJ3 RPL23AP20-201ENST00000447965 421 ntBASIC3.45□□□□□ -1.86
SMC4Q9NTJ3 ST13P20-201ENST00000447996 1065 ntBASIC3.45□□□□□ -1.86
SMC4Q9NTJ3 RPL31P3-201ENST00000458430 332 ntBASIC3.45□□□□□ -1.86
SMC4Q9NTJ3 RPS29P12-201ENST00000460178 152 ntBASIC3.45□□□□□ -1.86
SMC4Q9NTJ3 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC3.45□□□□□ -1.86
SMC4Q9NTJ3 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC3.45□□□□□ -1.86
SMC4Q9NTJ3 RNU7-51P-201ENST00000516560 62 ntBASIC3.45□□□□□ -1.86
SMC4Q9NTJ3 RNU6-56P-201ENST00000516986 93 ntBASIC3.45□□□□□ -1.86
SMC4Q9NTJ3 IGHVII-62-1-201ENST00000519283 235 ntBASIC3.45□□□□□ -1.86
SMC4Q9NTJ3 RGS4-209ENST00000531057 544 ntTSL 4 BASIC3.45□□□□□ -1.86
SMC4Q9NTJ3 AC138761.3-201ENST00000579993 334 ntBASIC3.45□□□□□ -1.86
SMC4Q9NTJ3 MIR4635-201ENST00000583759 79 ntBASIC3.45□□□□□ -1.86
SMC4Q9NTJ3 AC004805.2-201ENST00000605382 482 ntBASIC3.45□□□□□ -1.86
SMC4Q9NTJ3 AL365204.3-201ENST00000612448 685 ntBASIC3.45□□□□□ -1.86
SMC4Q9NTJ3 U2.21-201ENST00000637295 81 ntBASIC3.45□□□□□ -1.86
SMC4Q9NTJ3 DLD-214ENST00000639772 421 ntTSL 5 BASIC3.45□□□□□ -1.86
SMC4Q9NTJ3 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC3.45□□□□□ -1.86
SMC4Q9NTJ3 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC3.44□□□□□ -1.86
SMC4Q9NTJ3 ZNF519P1-201ENST00000449011 1626 ntBASIC3.44□□□□□ -1.86
SMC4Q9NTJ3 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC3.44□□□□□ -1.86
SMC4Q9NTJ3 OR5J1P-201ENST00000313544 939 ntBASIC3.44□□□□□ -1.86
SMC4Q9NTJ3 SMIM11P1-201ENST00000369586 178 ntBASIC3.44□□□□□ -1.86
SMC4Q9NTJ3 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
SMC4Q9NTJ3 RPL21P75-201ENST00000396599 483 ntBASIC3.44□□□□□ -1.86
SMC4Q9NTJ3 RPL21P28-201ENST00000401418 483 ntBASIC3.44□□□□□ -1.86
SMC4Q9NTJ3 AL592114.1-201ENST00000403842 483 ntBASIC3.44□□□□□ -1.86
SMC4Q9NTJ3 RPS3AP3-201ENST00000411933 242 ntBASIC3.44□□□□□ -1.86
SMC4Q9NTJ3 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC3.44□□□□□ -1.86
SMC4Q9NTJ3 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC3.44□□□□□ -1.86
SMC4Q9NTJ3 GPM6BP2-201ENST00000432046 144 ntBASIC3.44□□□□□ -1.86
SMC4Q9NTJ3 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC3.44□□□□□ -1.86
SMC4Q9NTJ3 GPM6BP1-201ENST00000446387 144 ntBASIC3.44□□□□□ -1.86
SMC4Q9NTJ3 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC3.44□□□□□ -1.86
SMC4Q9NTJ3 RPL12P25-201ENST00000455592 494 ntBASIC3.44□□□□□ -1.86
SMC4Q9NTJ3 RNU6-953P-201ENST00000459154 107 ntBASIC3.44□□□□□ -1.86
SMC4Q9NTJ3 snoU109.1-201ENST00000459339 135 ntBASIC3.44□□□□□ -1.86
SMC4Q9NTJ3 RPL21P39-201ENST00000463605 483 ntBASIC3.44□□□□□ -1.86
SMC4Q9NTJ3 RPL23AP11-201ENST00000475260 469 ntBASIC3.44□□□□□ -1.86
SMC4Q9NTJ3 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC3.44□□□□□ -1.86
SMC4Q9NTJ3 RPL21P93-201ENST00000480465 489 ntBASIC3.44□□□□□ -1.86
SMC4Q9NTJ3 RN7SL297P-201ENST00000483161 293 ntBASIC3.44□□□□□ -1.86
SMC4Q9NTJ3 AC087190.1-201ENST00000484462 480 ntBASIC3.44□□□□□ -1.86
SMC4Q9NTJ3 MTND1P3-201ENST00000484956 952 ntBASIC3.44□□□□□ -1.86
SMC4Q9NTJ3 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC3.44□□□□□ -1.86
SMC4Q9NTJ3 AC093591.1-201ENST00000491435 481 ntBASIC3.44□□□□□ -1.86
SMC4Q9NTJ3 RPL21P16-201ENST00000495531 483 ntBASIC3.44□□□□□ -1.86
SMC4Q9NTJ3 AC026801.1-201ENST00000497178 464 ntBASIC3.44□□□□□ -1.86
SMC4Q9NTJ3 AC010424.1-201ENST00000506336 297 ntBASIC3.44□□□□□ -1.86
SMC4Q9NTJ3 RNA5SP76-201ENST00000516277 87 ntBASIC3.44□□□□□ -1.86
SMC4Q9NTJ3 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC3.44□□□□□ -1.86
SMC4Q9NTJ3 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC3.44□□□□□ -1.86
SMC4Q9NTJ3 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC3.44□□□□□ -1.86
SMC4Q9NTJ3 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC3.44□□□□□ -1.86
SMC4Q9NTJ3 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC3.44□□□□□ -1.86
SMC4Q9NTJ3 AC006362.1-201ENST00000567392 174 ntBASIC3.44□□□□□ -1.86
SMC4Q9NTJ3 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC3.44□□□□□ -1.86
SMC4Q9NTJ3 AC104763.2-201ENST00000604179 382 ntBASIC3.44□□□□□ -1.86
SMC4Q9NTJ3 AC007363.1-201ENST00000604736 620 ntBASIC3.44□□□□□ -1.86
SMC4Q9NTJ3 ATP1B3P1-201ENST00000605365 821 ntBASIC3.44□□□□□ -1.86
SMC4Q9NTJ3 RN7SKP299-201ENST00000606679 301 ntBASIC3.44□□□□□ -1.86
SMC4Q9NTJ3 AC009090.3-201ENST00000616553 565 ntBASIC3.44□□□□□ -1.86
SMC4Q9NTJ3 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC3.44□□□□□ -1.86
SMC4Q9NTJ3 MIR6733-201ENST00000635723 61 ntBASIC3.44□□□□□ -1.86
SMC4Q9NTJ3 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
SMC4Q9NTJ3 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC3.43□□□□□ -1.86
SMC4Q9NTJ3 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC3.43□□□□□ -1.86
SMC4Q9NTJ3 RNU5E-1-201ENST00000362477 120 ntBASIC3.43□□□□□ -1.86
SMC4Q9NTJ3 SNORA80A-201ENST00000363922 136 ntBASIC3.43□□□□□ -1.86
SMC4Q9NTJ3 Y_RNA.553-201ENST00000384670 102 ntBASIC3.43□□□□□ -1.86
SMC4Q9NTJ3 SNORA40.3-201ENST00000390964 122 ntBASIC3.43□□□□□ -1.86
SMC4Q9NTJ3 AL360182.1-201ENST00000397433 468 ntBASIC3.43□□□□□ -1.86
SMC4Q9NTJ3 NDUFS5P4-201ENST00000412983 318 ntBASIC3.43□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 131.1 ms