Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC0.89□□□□□ -2.27
CDC42SE1Q9NRR8 RNU6-150P-201ENST00000516237 95 ntBASIC0.89□□□□□ -2.27
CDC42SE1Q9NRR8 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC0.89□□□□□ -2.27
CDC42SE1Q9NRR8 AC021451.1-201ENST00000523498 1129 ntBASIC0.89□□□□□ -2.27
CDC42SE1Q9NRR8 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC0.89□□□□□ -2.27
CDC42SE1Q9NRR8 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC0.89□□□□□ -2.27
CDC42SE1Q9NRR8 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC0.89□□□□□ -2.27
CDC42SE1Q9NRR8 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC0.89□□□□□ -2.27
CDC42SE1Q9NRR8 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC0.89□□□□□ -2.27
CDC42SE1Q9NRR8 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC0.89□□□□□ -2.27
CDC42SE1Q9NRR8 AC060771.1-201ENST00000582031 164 ntBASIC0.89□□□□□ -2.27
CDC42SE1Q9NRR8 MIR4293-201ENST00000584305 78 ntBASIC0.89□□□□□ -2.27
CDC42SE1Q9NRR8 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC0.89□□□□□ -2.27
CDC42SE1Q9NRR8 AC011445.2-201ENST00000599274 173 ntBASIC0.89□□□□□ -2.27
CDC42SE1Q9NRR8 AC006023.1-201ENST00000603944 259 ntBASIC0.89□□□□□ -2.27
CDC42SE1Q9NRR8 AL670379.10-201ENST00000604330 253 ntBASIC0.89□□□□□ -2.27
CDC42SE1Q9NRR8 AL670379.9-201ENST00000605428 253 ntBASIC0.89□□□□□ -2.27
CDC42SE1Q9NRR8 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC0.89□□□□□ -2.27
CDC42SE1Q9NRR8 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC0.89□□□□□ -2.27
CDC42SE1Q9NRR8 AL132822.1-201ENST00000617063 513 ntBASIC0.89□□□□□ -2.27
CDC42SE1Q9NRR8 AC009159.1-201ENST00000618386 642 ntBASIC0.89□□□□□ -2.27
CDC42SE1Q9NRR8 AC010378.1-201ENST00000619270 362 ntBASIC0.89□□□□□ -2.27
CDC42SE1Q9NRR8 AC091965.5-201ENST00000624785 342 ntBASIC0.89□□□□□ -2.27
CDC42SE1Q9NRR8 AC017037.3-201ENST00000625016 472 ntBASIC0.89□□□□□ -2.27
CDC42SE1Q9NRR8 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC0.88□□□□□ -2.27
CDC42SE1Q9NRR8 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC0.88□□□□□ -2.27
CDC42SE1Q9NRR8 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC0.88□□□□□ -2.27
CDC42SE1Q9NRR8 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC0.88□□□□□ -2.27
CDC42SE1Q9NRR8 DLEU2_6.3-201ENST00000340052 136 ntBASIC0.88□□□□□ -2.27
CDC42SE1Q9NRR8 MIR424-201ENST00000362227 98 ntBASIC0.88□□□□□ -2.27
CDC42SE1Q9NRR8 RNU1-33P-201ENST00000364249 162 ntBASIC0.88□□□□□ -2.27
CDC42SE1Q9NRR8 RNU6-777P-201ENST00000364265 104 ntBASIC0.88□□□□□ -2.27
CDC42SE1Q9NRR8 RNU6-898P-201ENST00000365627 104 ntBASIC0.88□□□□□ -2.27
CDC42SE1Q9NRR8 MIR490-201ENST00000384865 128 ntBASIC0.88□□□□□ -2.27
CDC42SE1Q9NRR8 MIR19A-201ENST00000384878 82 ntBASIC0.88□□□□□ -2.27
CDC42SE1Q9NRR8 MIR29C-201ENST00000385231 88 ntBASIC0.88□□□□□ -2.27
CDC42SE1Q9NRR8 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC0.88□□□□□ -2.27
CDC42SE1Q9NRR8 RPS29P4-201ENST00000414733 161 ntBASIC0.88□□□□□ -2.27
CDC42SE1Q9NRR8 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC0.88□□□□□ -2.27
CDC42SE1Q9NRR8 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC0.88□□□□□ -2.27
CDC42SE1Q9NRR8 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC0.88□□□□□ -2.27
CDC42SE1Q9NRR8 AC104651.1-201ENST00000427559 735 ntBASIC0.88□□□□□ -2.27
CDC42SE1Q9NRR8 AC027124.2-201ENST00000428249 105 ntBASIC0.88□□□□□ -2.27
CDC42SE1Q9NRR8 ARL5AP4-201ENST00000430731 512 ntBASIC0.88□□□□□ -2.27
CDC42SE1Q9NRR8 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC0.88□□□□□ -2.27
CDC42SE1Q9NRR8 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC0.88□□□□□ -2.27
CDC42SE1Q9NRR8 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC0.88□□□□□ -2.27
CDC42SE1Q9NRR8 RPL31P58-201ENST00000469001 379 ntBASIC0.88□□□□□ -2.27
CDC42SE1Q9NRR8 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC0.88□□□□□ -2.27
CDC42SE1Q9NRR8 AC024589.1-201ENST00000512207 263 ntBASIC0.88□□□□□ -2.27
CDC42SE1Q9NRR8 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC0.88□□□□□ -2.27
CDC42SE1Q9NRR8 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC0.88□□□□□ -2.27
CDC42SE1Q9NRR8 AP003122.3-201ENST00000526316 255 ntBASIC0.88□□□□□ -2.27
CDC42SE1Q9NRR8 AC084851.1-201ENST00000529105 249 ntBASIC0.88□□□□□ -2.27
CDC42SE1Q9NRR8 AC113192.3-201ENST00000529152 742 ntBASIC0.88□□□□□ -2.27
CDC42SE1Q9NRR8 CARD18-203ENST00000532895 422 ntTSL 2 BASIC0.88□□□□□ -2.27
CDC42SE1Q9NRR8 AC005832.3-201ENST00000537929 631 ntBASIC0.88□□□□□ -2.27
CDC42SE1Q9NRR8 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC0.88□□□□□ -2.27
CDC42SE1Q9NRR8 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC0.88□□□□□ -2.27
CDC42SE1Q9NRR8 AC023825.1-201ENST00000566704 1030 ntBASIC0.88□□□□□ -2.27
CDC42SE1Q9NRR8 MIR5680-201ENST00000577577 84 ntBASIC0.88□□□□□ -2.27
CDC42SE1Q9NRR8 MIR4489-201ENST00000578869 62 ntBASIC0.88□□□□□ -2.27
CDC42SE1Q9NRR8 AC126365.2-201ENST00000580630 379 ntBASIC0.88□□□□□ -2.27
CDC42SE1Q9NRR8 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC0.88□□□□□ -2.27
CDC42SE1Q9NRR8 RPL30P11-203ENST00000598995 310 ntBASIC0.88□□□□□ -2.27
CDC42SE1Q9NRR8 AP001485.1-201ENST00000604799 199 ntBASIC0.88□□□□□ -2.27
CDC42SE1Q9NRR8 AC005000.2-201ENST00000605468 310 ntBASIC0.88□□□□□ -2.27
CDC42SE1Q9NRR8 AC098614.4-201ENST00000607601 462 ntBASIC0.88□□□□□ -2.27
CDC42SE1Q9NRR8 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC0.88□□□□□ -2.27
CDC42SE1Q9NRR8 DLEU2_6.2-201ENST00000620994 136 ntBASIC0.88□□□□□ -2.27
CDC42SE1Q9NRR8 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC0.88□□□□□ -2.27
CDC42SE1Q9NRR8 AP000676.3-201ENST00000623299 569 ntBASIC0.88□□□□□ -2.27
CDC42SE1Q9NRR8 U6.99-201ENST00000637524 83 ntBASIC0.88□□□□□ -2.27
CDC42SE1Q9NRR8 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC0.88□□□□□ -2.27
CDC42SE1Q9NRR8 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC0.87□□□□□ -2.27
CDC42SE1Q9NRR8 MTND5P33-201ENST00000571250 1450 ntBASIC0.87□□□□□ -2.27
CDC42SE1Q9NRR8 DDX43P2-201ENST00000604753 1354 ntBASIC0.87□□□□□ -2.27
CDC42SE1Q9NRR8 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC0.87□□□□□ -2.27
CDC42SE1Q9NRR8 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC0.87□□□□□ -2.27
CDC42SE1Q9NRR8 SNORA5A-201ENST00000384111 134 ntBASIC0.87□□□□□ -2.27
CDC42SE1Q9NRR8 SNORD26-201ENST00000384147 75 ntBASIC0.87□□□□□ -2.27
CDC42SE1Q9NRR8 RNU1-13P-201ENST00000384499 162 ntBASIC0.87□□□□□ -2.27
CDC42SE1Q9NRR8 MIR597-201ENST00000384968 97 ntBASIC0.87□□□□□ -2.27
CDC42SE1Q9NRR8 MIR30A-201ENST00000385092 71 ntBASIC0.87□□□□□ -2.27
CDC42SE1Q9NRR8 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC0.87□□□□□ -2.27
CDC42SE1Q9NRR8 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC0.87□□□□□ -2.27
CDC42SE1Q9NRR8 TIMM9P2-201ENST00000419324 266 ntBASIC0.87□□□□□ -2.27
CDC42SE1Q9NRR8 USP9YP21-201ENST00000420603 432 ntBASIC0.87□□□□□ -2.27
CDC42SE1Q9NRR8 AL953862.1-201ENST00000423016 168 ntBASIC0.87□□□□□ -2.27
CDC42SE1Q9NRR8 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC0.87□□□□□ -2.27
CDC42SE1Q9NRR8 NDUFAF4P2-201ENST00000445374 520 ntBASIC0.87□□□□□ -2.27
CDC42SE1Q9NRR8 Z75741.1-201ENST00000446793 314 ntBASIC0.87□□□□□ -2.27
CDC42SE1Q9NRR8 ELOCP30-201ENST00000447108 299 ntBASIC0.87□□□□□ -2.27
CDC42SE1Q9NRR8 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC0.87□□□□□ -2.27
CDC42SE1Q9NRR8 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC0.87□□□□□ -2.27
CDC42SE1Q9NRR8 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC0.87□□□□□ -2.27
CDC42SE1Q9NRR8 AC104629.1-201ENST00000494226 508 ntBASIC0.87□□□□□ -2.27
CDC42SE1Q9NRR8 AC010374.2-201ENST00000512933 535 ntBASIC0.87□□□□□ -2.27
CDC42SE1Q9NRR8 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC0.87□□□□□ -2.27
CDC42SE1Q9NRR8 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC0.87□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 104.6 ms