Protein–RNA interactions for Protein: Q9NRQ5

SMCO4, Single-pass membrane and coiled-coil domain-containing protein 4, humanhuman

Predictions only

Length 59 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4Q9NRQ5 BMI1P1-201ENST00000445879 941 ntBASIC0.42□□□□□ -2.34
SMCO4Q9NRQ5 PGBD4P5-201ENST00000445958 426 ntBASIC0.42□□□□□ -2.34
SMCO4Q9NRQ5 RAP1BP2-201ENST00000478270 544 ntBASIC0.42□□□□□ -2.34
SMCO4Q9NRQ5 AC091917.2-201ENST00000505002 744 ntBASIC0.42□□□□□ -2.34
SMCO4Q9NRQ5 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC0.42□□□□□ -2.34
SMCO4Q9NRQ5 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC0.42□□□□□ -2.34
SMCO4Q9NRQ5 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC0.42□□□□□ -2.34
SMCO4Q9NRQ5 RNU4ATAC11P-201ENST00000515939 126 ntBASIC0.42□□□□□ -2.34
SMCO4Q9NRQ5 SNORA31.16-201ENST00000516773 139 ntBASIC0.42□□□□□ -2.34
SMCO4Q9NRQ5 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC0.42□□□□□ -2.34
SMCO4Q9NRQ5 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC0.42□□□□□ -2.34
SMCO4Q9NRQ5 AL391646.1-201ENST00000603860 190 ntBASIC0.42□□□□□ -2.34
SMCO4Q9NRQ5 AC025811.1-201ENST00000604312 472 ntBASIC0.42□□□□□ -2.34
SMCO4Q9NRQ5 AL078604.3-201ENST00000615580 211 ntBASIC0.42□□□□□ -2.34
SMCO4Q9NRQ5 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC0.42□□□□□ -2.34
SMCO4Q9NRQ5 MIR6852-201ENST00000621699 66 ntBASIC0.42□□□□□ -2.34
SMCO4Q9NRQ5 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC0.42□□□□□ -2.34
SMCO4Q9NRQ5 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC0.42□□□□□ -2.34
SMCO4Q9NRQ5 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.42□□□□□ -2.34
SMCO4Q9NRQ5 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.42□□□□□ -2.34
SMCO4Q9NRQ5 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.42□□□□□ -2.34
SMCO4Q9NRQ5 MTND5P30-201ENST00000452896 1731 ntBASIC0.41□□□□□ -2.34
SMCO4Q9NRQ5 OR5T3-201ENST00000303059 1023 ntBASIC0.41□□□□□ -2.34
SMCO4Q9NRQ5 RNU6-439P-201ENST00000384188 106 ntBASIC0.41□□□□□ -2.34
SMCO4Q9NRQ5 TAF9BP2-201ENST00000400856 499 ntBASIC0.41□□□□□ -2.34
SMCO4Q9NRQ5 SSXP10-201ENST00000402595 565 ntBASIC0.41□□□□□ -2.34
SMCO4Q9NRQ5 MIR1289-2-201ENST00000408360 111 ntBASIC0.41□□□□□ -2.34
SMCO4Q9NRQ5 MIR1283-2-201ENST00000408621 87 ntBASIC0.41□□□□□ -2.34
SMCO4Q9NRQ5 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC0.41□□□□□ -2.34
SMCO4Q9NRQ5 AC004941.2-201ENST00000427009 228 ntBASIC0.41□□□□□ -2.34
SMCO4Q9NRQ5 AL512844.2-201ENST00000433990 593 ntBASIC0.41□□□□□ -2.34
SMCO4Q9NRQ5 RPS15AP5-201ENST00000436276 388 ntBASIC0.41□□□□□ -2.34
SMCO4Q9NRQ5 MTCYBP16-201ENST00000509187 1129 ntBASIC0.41□□□□□ -2.34
SMCO4Q9NRQ5 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC0.41□□□□□ -2.34
SMCO4Q9NRQ5 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC0.41□□□□□ -2.34
SMCO4Q9NRQ5 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC0.41□□□□□ -2.34
SMCO4Q9NRQ5 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC0.41□□□□□ -2.34
SMCO4Q9NRQ5 AC073544.2-201ENST00000601155 540 ntBASIC0.41□□□□□ -2.34
SMCO4Q9NRQ5 AC080078.3-201ENST00000605407 463 ntBASIC0.41□□□□□ -2.34
SMCO4Q9NRQ5 AC239803.2-201ENST00000610161 430 ntBASIC0.41□□□□□ -2.34
SMCO4Q9NRQ5 AL118508.4-201ENST00000624142 1176 ntBASIC0.41□□□□□ -2.34
SMCO4Q9NRQ5 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.4□□□□□ -2.34
SMCO4Q9NRQ5 AL391987.6-201ENST00000305671 199 ntBASIC0.4□□□□□ -2.35
SMCO4Q9NRQ5 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC0.4□□□□□ -2.35
SMCO4Q9NRQ5 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC0.4□□□□□ -2.35
SMCO4Q9NRQ5 AC097463.2-201ENST00000421074 142 ntBASIC0.4□□□□□ -2.35
SMCO4Q9NRQ5 SNRPEP7-201ENST00000438350 220 ntBASIC0.4□□□□□ -2.35
SMCO4Q9NRQ5 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC0.4□□□□□ -2.35
SMCO4Q9NRQ5 MTCYBP12-201ENST00000440559 1134 ntBASIC0.4□□□□□ -2.35
SMCO4Q9NRQ5 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC0.4□□□□□ -2.35
SMCO4Q9NRQ5 AC104164.3-201ENST00000467363 1258 ntBASIC0.4□□□□□ -2.35
SMCO4Q9NRQ5 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC0.4□□□□□ -2.35
SMCO4Q9NRQ5 RPS3AP22-201ENST00000488297 769 ntBASIC0.4□□□□□ -2.35
SMCO4Q9NRQ5 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC0.4□□□□□ -2.35
SMCO4Q9NRQ5 AL359273.1-201ENST00000510918 627 ntBASIC0.4□□□□□ -2.35
SMCO4Q9NRQ5 RNU1-41P-201ENST00000516161 162 ntBASIC0.4□□□□□ -2.35
SMCO4Q9NRQ5 RNU1-48P-201ENST00000516400 162 ntBASIC0.4□□□□□ -2.35
SMCO4Q9NRQ5 RNU6-1282P-201ENST00000516735 96 ntBASIC0.4□□□□□ -2.35
SMCO4Q9NRQ5 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC0.4□□□□□ -2.35
SMCO4Q9NRQ5 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC0.4□□□□□ -2.35
SMCO4Q9NRQ5 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC0.4□□□□□ -2.35
SMCO4Q9NRQ5 AC011611.5-201ENST00000552477 578 ntBASIC0.4□□□□□ -2.35
SMCO4Q9NRQ5 AC009977.1-201ENST00000586015 570 ntBASIC0.4□□□□□ -2.35
SMCO4Q9NRQ5 AC009233.1-201ENST00000616477 371 ntBASIC0.4□□□□□ -2.35
SMCO4Q9NRQ5 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC0.4□□□□□ -2.35
SMCO4Q9NRQ5 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC0.39□□□□□ -2.35
SMCO4Q9NRQ5 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC0.39□□□□□ -2.35
SMCO4Q9NRQ5 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC0.39□□□□□ -2.35
SMCO4Q9NRQ5 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC0.39□□□□□ -2.35
SMCO4Q9NRQ5 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC0.39□□□□□ -2.35
SMCO4Q9NRQ5 MIR520E-201ENST00000384867 87 ntBASIC0.39□□□□□ -2.35
SMCO4Q9NRQ5 AC096649.2-201ENST00000416186 393 ntBASIC0.39□□□□□ -2.35
SMCO4Q9NRQ5 DSCR4-IT1-201ENST00000417138 424 ntTSL 5 BASIC0.39□□□□□ -2.35
SMCO4Q9NRQ5 AC087477.1-201ENST00000465747 340 ntBASIC0.39□□□□□ -2.35
SMCO4Q9NRQ5 ARL2BPP4-201ENST00000506854 471 ntBASIC0.39□□□□□ -2.35
SMCO4Q9NRQ5 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC0.39□□□□□ -2.35
SMCO4Q9NRQ5 MGAT4D-203ENST00000511113 1125 ntAPPRIS P2 TSL 5 BASIC0.39□□□□□ -2.35
SMCO4Q9NRQ5 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC0.39□□□□□ -2.35
SMCO4Q9NRQ5 SNORA48.11-201ENST00000517015 89 ntBASIC0.39□□□□□ -2.35
SMCO4Q9NRQ5 AP000873.5-201ENST00000533906 236 ntBASIC0.39□□□□□ -2.35
SMCO4Q9NRQ5 DUXAP1-201ENST00000556632 463 ntBASIC0.39□□□□□ -2.35
SMCO4Q9NRQ5 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC0.39□□□□□ -2.35
SMCO4Q9NRQ5 MTCO2P2-201ENST00000591258 225 ntBASIC0.39□□□□□ -2.35
SMCO4Q9NRQ5 WISP1-OT1-201ENST00000602893 642 ntBASIC0.39□□□□□ -2.35
SMCO4Q9NRQ5 AC097468.3-201ENST00000607956 456 ntBASIC0.39□□□□□ -2.35
SMCO4Q9NRQ5 AL121652.1-201ENST00000608851 448 ntBASIC0.39□□□□□ -2.35
SMCO4Q9NRQ5 AC024581.2-201ENST00000619986 252 ntBASIC0.39□□□□□ -2.35
SMCO4Q9NRQ5 AC138393.1-203ENST00000327086 343 ntBASIC0.38□□□□□ -2.35
SMCO4Q9NRQ5 SNORA4.1-201ENST00000364263 144 ntBASIC0.38□□□□□ -2.35
SMCO4Q9NRQ5 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC0.38□□□□□ -2.35
SMCO4Q9NRQ5 AC083875.1-201ENST00000419509 405 ntBASIC0.38□□□□□ -2.35
SMCO4Q9NRQ5 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC0.38□□□□□ -2.35
SMCO4Q9NRQ5 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC0.38□□□□□ -2.35
SMCO4Q9NRQ5 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC0.38□□□□□ -2.35
SMCO4Q9NRQ5 AC000111.1-201ENST00000441019 221 ntTSL 3 BASIC0.38□□□□□ -2.35
SMCO4Q9NRQ5 SNRPFP4-201ENST00000456366 242 ntBASIC0.38□□□□□ -2.35
SMCO4Q9NRQ5 MRPS17P3-201ENST00000465453 385 ntBASIC0.38□□□□□ -2.35
SMCO4Q9NRQ5 AC104997.1-201ENST00000519761 717 ntBASIC0.38□□□□□ -2.35
SMCO4Q9NRQ5 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC0.38□□□□□ -2.35
SMCO4Q9NRQ5 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC0.38□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 107.3 ms