Protein–RNA interactions for Protein: Q9NPJ1

MKKS, McKusick-Kaufman/Bardet-Biedl syndromes putative chaperonin, humanhuman

Predicted RBP Predictions only

Length 570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MKKSQ9NPJ1 SNORA1.3-201ENST00000384676 136 ntBASIC3.16□□□□□ -1.9
MKKSQ9NPJ1 AL139397.2-201ENST00000404529 772 ntBASIC3.16□□□□□ -1.9
MKKSQ9NPJ1 RNU2-33P-201ENST00000410344 192 ntBASIC3.16□□□□□ -1.9
MKKSQ9NPJ1 RNU2-29P-201ENST00000410423 189 ntBASIC3.16□□□□□ -1.9
MKKSQ9NPJ1 AC126124.2-201ENST00000413542 321 ntBASIC3.16□□□□□ -1.9
MKKSQ9NPJ1 MTND1P23-201ENST00000416931 372 ntBASIC3.16□□□□□ -1.9
MKKSQ9NPJ1 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC3.16□□□□□ -1.9
MKKSQ9NPJ1 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC3.16□□□□□ -1.9
MKKSQ9NPJ1 TMEM167AP1-201ENST00000423409 219 ntBASIC3.16□□□□□ -1.9
MKKSQ9NPJ1 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.16□□□□□ -1.9
MKKSQ9NPJ1 AC006539.3-201ENST00000454258 129 ntBASIC3.16□□□□□ -1.9
MKKSQ9NPJ1 AL162395.1-201ENST00000457882 422 ntBASIC3.16□□□□□ -1.9
MKKSQ9NPJ1 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC3.16□□□□□ -1.9
MKKSQ9NPJ1 MTCO3P38-201ENST00000468910 766 ntBASIC3.16□□□□□ -1.9
MKKSQ9NPJ1 AP002884.2-201ENST00000471647 395 ntBASIC3.16□□□□□ -1.9
MKKSQ9NPJ1 RPL30P5-201ENST00000494923 336 ntBASIC3.16□□□□□ -1.9
MKKSQ9NPJ1 PHBP14-201ENST00000512887 367 ntBASIC3.16□□□□□ -1.9
MKKSQ9NPJ1 RNU6-1178P-201ENST00000516674 107 ntBASIC3.16□□□□□ -1.9
MKKSQ9NPJ1 RNU6-835P-201ENST00000516974 104 ntBASIC3.16□□□□□ -1.9
MKKSQ9NPJ1 AC022690.1-201ENST00000526681 550 ntBASIC3.16□□□□□ -1.9
MKKSQ9NPJ1 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC3.16□□□□□ -1.9
MKKSQ9NPJ1 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC3.16□□□□□ -1.9
MKKSQ9NPJ1 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC3.16□□□□□ -1.9
MKKSQ9NPJ1 AC092325.1-201ENST00000566449 554 ntBASIC3.16□□□□□ -1.9
MKKSQ9NPJ1 MIR4703-201ENST00000577728 79 ntBASIC3.16□□□□□ -1.9
MKKSQ9NPJ1 AC015917.1-201ENST00000579654 510 ntBASIC3.16□□□□□ -1.9
MKKSQ9NPJ1 AC008521.1-201ENST00000587471 187 ntBASIC3.16□□□□□ -1.9
MKKSQ9NPJ1 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC3.16□□□□□ -1.9
MKKSQ9NPJ1 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC3.16□□□□□ -1.9
MKKSQ9NPJ1 AP000907.4-201ENST00000604143 237 ntBASIC3.16□□□□□ -1.9
MKKSQ9NPJ1 AC008945.2-201ENST00000606056 604 ntBASIC3.16□□□□□ -1.9
MKKSQ9NPJ1 AC022893.3-201ENST00000607665 437 ntBASIC3.16□□□□□ -1.9
MKKSQ9NPJ1 AC104458.1-201ENST00000608243 463 ntBASIC3.16□□□□□ -1.9
MKKSQ9NPJ1 MIR6076-201ENST00000617521 113 ntBASIC3.16□□□□□ -1.9
MKKSQ9NPJ1 FER-210ENST00000628534 558 ntTSL 5 BASIC3.16□□□□□ -1.9
MKKSQ9NPJ1 MTND1P37-201ENST00000636562 264 ntBASIC3.16□□□□□ -1.9
MKKSQ9NPJ1 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
MKKSQ9NPJ1 AC103710.2-202ENST00000641454 2853 ntBASIC3.16□□□□□ -1.9
MKKSQ9NPJ1 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
MKKSQ9NPJ1 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.15□□□□□ -1.9
MKKSQ9NPJ1 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.15□□□□□ -1.9
MKKSQ9NPJ1 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC3.15□□□□□ -1.9
MKKSQ9NPJ1 AC004972.1-201ENST00000623934 2209 ntBASIC3.15□□□□□ -1.9
MKKSQ9NPJ1 Y_RNA.89-201ENST00000363031 102 ntBASIC3.15□□□□□ -1.91
MKKSQ9NPJ1 Y_RNA.333-201ENST00000365274 102 ntBASIC3.15□□□□□ -1.91
MKKSQ9NPJ1 RNU6-877P-201ENST00000383868 107 ntBASIC3.15□□□□□ -1.91
MKKSQ9NPJ1 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.15□□□□□ -1.91
MKKSQ9NPJ1 SNORA11.1-201ENST00000408133 129 ntBASIC3.15□□□□□ -1.91
MKKSQ9NPJ1 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC3.15□□□□□ -1.91
MKKSQ9NPJ1 AC092809.3-201ENST00000415453 231 ntBASIC3.15□□□□□ -1.91
MKKSQ9NPJ1 MTCYBP8-201ENST00000422855 651 ntBASIC3.15□□□□□ -1.91
MKKSQ9NPJ1 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC3.15□□□□□ -1.91
MKKSQ9NPJ1 RPL23AP82-202ENST00000427528 469 ntBASIC3.15□□□□□ -1.91
MKKSQ9NPJ1 AC005300.1-201ENST00000428401 373 ntBASIC3.15□□□□□ -1.91
MKKSQ9NPJ1 AC092573.2-201ENST00000434546 243 ntBASIC3.15□□□□□ -1.91
MKKSQ9NPJ1 PIGFP3-201ENST00000441918 722 ntBASIC3.15□□□□□ -1.91
MKKSQ9NPJ1 DPPA3P1-201ENST00000448050 469 ntBASIC3.15□□□□□ -1.91
MKKSQ9NPJ1 AC073415.1-201ENST00000449240 153 ntBASIC3.15□□□□□ -1.91
MKKSQ9NPJ1 MRPS31P2-201ENST00000451581 518 ntBASIC3.15□□□□□ -1.91
MKKSQ9NPJ1 CACYBPP2-201ENST00000453625 678 ntBASIC3.15□□□□□ -1.91
MKKSQ9NPJ1 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC3.15□□□□□ -1.91
MKKSQ9NPJ1 CENPBD1P1-201ENST00000464061 469 ntBASIC3.15□□□□□ -1.91
MKKSQ9NPJ1 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC3.15□□□□□ -1.91
MKKSQ9NPJ1 KC877373.1-201ENST00000479066 408 ntBASIC3.15□□□□□ -1.91
MKKSQ9NPJ1 RBBP4P6-201ENST00000508098 202 ntBASIC3.15□□□□□ -1.91
MKKSQ9NPJ1 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC3.15□□□□□ -1.91
MKKSQ9NPJ1 RNA5SP401-201ENST00000515920 127 ntBASIC3.15□□□□□ -1.91
MKKSQ9NPJ1 RN7SKP219-201ENST00000516825 296 ntBASIC3.15□□□□□ -1.91
MKKSQ9NPJ1 RNU6-143P-201ENST00000516942 93 ntBASIC3.15□□□□□ -1.91
MKKSQ9NPJ1 RNA5SP471-201ENST00000516971 106 ntBASIC3.15□□□□□ -1.91
MKKSQ9NPJ1 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC3.15□□□□□ -1.91
MKKSQ9NPJ1 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC3.15□□□□□ -1.91
MKKSQ9NPJ1 TRAV28-201ENST00000557548 323 ntBASIC3.15□□□□□ -1.91
MKKSQ9NPJ1 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.15□□□□□ -1.91
MKKSQ9NPJ1 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.15□□□□□ -1.91
MKKSQ9NPJ1 AC068135.2-201ENST00000569293 1028 ntBASIC3.15□□□□□ -1.91
MKKSQ9NPJ1 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC3.15□□□□□ -1.91
MKKSQ9NPJ1 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC3.15□□□□□ -1.91
MKKSQ9NPJ1 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC3.15□□□□□ -1.91
MKKSQ9NPJ1 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC3.15□□□□□ -1.91
MKKSQ9NPJ1 BNIP3P9-201ENST00000603714 553 ntBASIC3.15□□□□□ -1.91
MKKSQ9NPJ1 AC098826.3-201ENST00000603823 466 ntBASIC3.15□□□□□ -1.91
MKKSQ9NPJ1 AL670379.4-201ENST00000605279 254 ntBASIC3.15□□□□□ -1.91
MKKSQ9NPJ1 AC073657.2-201ENST00000605661 303 ntBASIC3.15□□□□□ -1.91
MKKSQ9NPJ1 AC008962.1-201ENST00000605729 304 ntBASIC3.15□□□□□ -1.91
MKKSQ9NPJ1 YWHAEP7-203ENST00000622054 312 ntBASIC3.15□□□□□ -1.91
MKKSQ9NPJ1 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC3.15□□□□□ -1.91
MKKSQ9NPJ1 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.15□□□□□ -1.91
MKKSQ9NPJ1 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.15□□□□□ -1.91
MKKSQ9NPJ1 AL079305.1-201ENST00000623159 3008 ntBASIC3.15□□□□□ -1.91
MKKSQ9NPJ1 AC058791.1-201ENST00000608412 3198 ntBASIC3.15□□□□□ -1.91
MKKSQ9NPJ1 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC3.15□□□□□ -1.91
MKKSQ9NPJ1 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.15□□□□□ -1.91
MKKSQ9NPJ1 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC3.15□□□□□ -1.91
MKKSQ9NPJ1 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
MKKSQ9NPJ1 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC3.14□□□□□ -1.91
MKKSQ9NPJ1 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.14□□□□□ -1.91
MKKSQ9NPJ1 MIR30E-201ENST00000362104 92 ntBASIC3.14□□□□□ -1.91
MKKSQ9NPJ1 RNU6-512P-201ENST00000364438 103 ntBASIC3.14□□□□□ -1.91
MKKSQ9NPJ1 Y_RNA.295-201ENST00000364918 102 ntBASIC3.14□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 93.6 ms