Protein–RNA interactions for Protein: Q9NP66

HMG20A, High mobility group protein 20A, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20AQ9NP66 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC2.02□□□□□ -2.09
HMG20AQ9NP66 IPO7P1-201ENST00000442031 636 ntBASIC2.02□□□□□ -2.09
HMG20AQ9NP66 AC108938.1-201ENST00000451204 136 ntBASIC2.02□□□□□ -2.09
HMG20AQ9NP66 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
HMG20AQ9NP66 RPS3P1-201ENST00000456781 192 ntBASIC2.02□□□□□ -2.09
HMG20AQ9NP66 MRPS17P3-201ENST00000465453 385 ntBASIC2.02□□□□□ -2.09
HMG20AQ9NP66 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC2.02□□□□□ -2.09
HMG20AQ9NP66 AF131216.2-201ENST00000512316 564 ntBASIC2.02□□□□□ -2.09
HMG20AQ9NP66 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC2.02□□□□□ -2.09
HMG20AQ9NP66 DEFB108A-201ENST00000530110 222 ntBASIC2.02□□□□□ -2.09
HMG20AQ9NP66 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC2.02□□□□□ -2.09
HMG20AQ9NP66 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC2.02□□□□□ -2.09
HMG20AQ9NP66 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC2.02□□□□□ -2.09
HMG20AQ9NP66 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
HMG20AQ9NP66 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.02□□□□□ -2.09
HMG20AQ9NP66 AC010546.1-201ENST00000569391 485 ntBASIC2.02□□□□□ -2.09
HMG20AQ9NP66 RPS3AP23-202ENST00000574601 686 ntBASIC2.02□□□□□ -2.09
HMG20AQ9NP66 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.02□□□□□ -2.09
HMG20AQ9NP66 AC007621.1-201ENST00000604544 437 ntBASIC2.02□□□□□ -2.09
HMG20AQ9NP66 AC009159.2-201ENST00000617603 606 ntBASIC2.02□□□□□ -2.09
HMG20AQ9NP66 UCA1.1-201ENST00000620952 75 ntBASIC2.02□□□□□ -2.09
HMG20AQ9NP66 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC2.02□□□□□ -2.09
HMG20AQ9NP66 MIR203B-201ENST00000636080 86 ntBASIC2.02□□□□□ -2.09
HMG20AQ9NP66 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC2.02□□□□□ -2.09
HMG20AQ9NP66 AL365361.1-201ENST00000566942 3481 ntBASIC2.01□□□□□ -2.09
HMG20AQ9NP66 ZNF658B-202ENST00000615961 3375 ntBASIC2.01□□□□□ -2.09
HMG20AQ9NP66 AL445523.1-201ENST00000451184 1362 ntBASIC2.01□□□□□ -2.09
HMG20AQ9NP66 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC2.01□□□□□ -2.09
HMG20AQ9NP66 RNU5A-8P-201ENST00000364102 114 ntBASIC2.01□□□□□ -2.09
HMG20AQ9NP66 RNU6-512P-201ENST00000364438 103 ntBASIC2.01□□□□□ -2.09
HMG20AQ9NP66 AL355497.1-201ENST00000406262 551 ntBASIC2.01□□□□□ -2.09
HMG20AQ9NP66 AC023141.4-201ENST00000412031 328 ntBASIC2.01□□□□□ -2.09
HMG20AQ9NP66 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC2.01□□□□□ -2.09
HMG20AQ9NP66 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC2.01□□□□□ -2.09
HMG20AQ9NP66 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC2.01□□□□□ -2.09
HMG20AQ9NP66 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC2.01□□□□□ -2.09
HMG20AQ9NP66 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC2.01□□□□□ -2.09
HMG20AQ9NP66 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC2.01□□□□□ -2.09
HMG20AQ9NP66 EPS15P1-201ENST00000448836 336 ntBASIC2.01□□□□□ -2.09
HMG20AQ9NP66 ZNF114P1-201ENST00000453500 292 ntBASIC2.01□□□□□ -2.09
HMG20AQ9NP66 RNU7-23P-201ENST00000459465 62 ntBASIC2.01□□□□□ -2.09
HMG20AQ9NP66 AC004924.1-201ENST00000480160 781 ntBASIC2.01□□□□□ -2.09
HMG20AQ9NP66 AC026436.1-201ENST00000510537 270 ntBASIC2.01□□□□□ -2.09
HMG20AQ9NP66 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.01□□□□□ -2.09
HMG20AQ9NP66 RNU6-1129P-201ENST00000515964 104 ntBASIC2.01□□□□□ -2.09
HMG20AQ9NP66 SNORA3.4-201ENST00000515969 96 ntBASIC2.01□□□□□ -2.09
HMG20AQ9NP66 RNA5SP148-201ENST00000516527 94 ntBASIC2.01□□□□□ -2.09
HMG20AQ9NP66 RNA5SP290-201ENST00000517133 127 ntBASIC2.01□□□□□ -2.09
HMG20AQ9NP66 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC2.01□□□□□ -2.09
HMG20AQ9NP66 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC2.01□□□□□ -2.09
HMG20AQ9NP66 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC2.01□□□□□ -2.09
HMG20AQ9NP66 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC2.01□□□□□ -2.09
HMG20AQ9NP66 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.01□□□□□ -2.09
HMG20AQ9NP66 AC093012.1-202ENST00000549403 582 ntBASIC2.01□□□□□ -2.09
HMG20AQ9NP66 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC2.01□□□□□ -2.09
HMG20AQ9NP66 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC2.01□□□□□ -2.09
HMG20AQ9NP66 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC2.01□□□□□ -2.09
HMG20AQ9NP66 AP001981.2-201ENST00000603241 418 ntBASIC2.01□□□□□ -2.09
HMG20AQ9NP66 AL161729.4-201ENST00000604650 476 ntBASIC2.01□□□□□ -2.09
HMG20AQ9NP66 AP000860.1-201ENST00000605250 559 ntBASIC2.01□□□□□ -2.09
HMG20AQ9NP66 AC004805.2-201ENST00000605382 482 ntBASIC2.01□□□□□ -2.09
HMG20AQ9NP66 AC034229.4-201ENST00000607861 441 ntBASIC2.01□□□□□ -2.09
HMG20AQ9NP66 AC087683.2-201ENST00000611384 326 ntBASIC2.01□□□□□ -2.09
HMG20AQ9NP66 MIR6766-201ENST00000622641 72 ntBASIC2.01□□□□□ -2.09
HMG20AQ9NP66 AL031601.2-202ENST00000622650 282 ntBASIC2.01□□□□□ -2.09
HMG20AQ9NP66 DUXAP9-208ENST00000622815 614 ntBASIC2.01□□□□□ -2.09
HMG20AQ9NP66 AC012640.5-201ENST00000623897 319 ntBASIC2.01□□□□□ -2.09
HMG20AQ9NP66 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC2.01□□□□□ -2.09
HMG20AQ9NP66 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
HMG20AQ9NP66 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC2□□□□□ -2.09
HMG20AQ9NP66 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC2□□□□□ -2.09
HMG20AQ9NP66 AL359851.1-201ENST00000569460 4997 ntBASIC2□□□□□ -2.09
HMG20AQ9NP66 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC2□□□□□ -2.09
HMG20AQ9NP66 RNU6-500P-201ENST00000362349 107 ntBASIC2□□□□□ -2.09
HMG20AQ9NP66 SNORA5B-201ENST00000363786 132 ntBASIC2□□□□□ -2.09
HMG20AQ9NP66 RNU6-461P-201ENST00000364195 107 ntBASIC2□□□□□ -2.09
HMG20AQ9NP66 RNY4P16-201ENST00000364768 94 ntBASIC2□□□□□ -2.09
HMG20AQ9NP66 RNU6-701P-201ENST00000384059 107 ntBASIC2□□□□□ -2.09
HMG20AQ9NP66 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC2□□□□□ -2.09
HMG20AQ9NP66 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2□□□□□ -2.09
HMG20AQ9NP66 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC2□□□□□ -2.09
HMG20AQ9NP66 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC2□□□□□ -2.09
HMG20AQ9NP66 AC093106.2-201ENST00000428212 385 ntBASIC2□□□□□ -2.09
HMG20AQ9NP66 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC2□□□□□ -2.09
HMG20AQ9NP66 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC2□□□□□ -2.09
HMG20AQ9NP66 MTND1P28-201ENST00000435623 950 ntBASIC2□□□□□ -2.09
HMG20AQ9NP66 RPL37P21-201ENST00000435890 276 ntBASIC2□□□□□ -2.09
HMG20AQ9NP66 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC2□□□□□ -2.09
HMG20AQ9NP66 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC2□□□□□ -2.09
HMG20AQ9NP66 AC118469.1-201ENST00000442943 488 ntBASIC2□□□□□ -2.09
HMG20AQ9NP66 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC2□□□□□ -2.09
HMG20AQ9NP66 AL160314.1-201ENST00000490836 438 ntBASIC2□□□□□ -2.09
HMG20AQ9NP66 RPF2P2-201ENST00000504693 896 ntBASIC2□□□□□ -2.09
HMG20AQ9NP66 MRPS36P2-201ENST00000512569 299 ntBASIC2□□□□□ -2.09
HMG20AQ9NP66 RNU6-927P-201ENST00000516199 100 ntBASIC2□□□□□ -2.09
HMG20AQ9NP66 RNU6-678P-201ENST00000516832 109 ntBASIC2□□□□□ -2.09
HMG20AQ9NP66 RNA5SP291-201ENST00000517222 105 ntBASIC2□□□□□ -2.09
HMG20AQ9NP66 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC2□□□□□ -2.09
HMG20AQ9NP66 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC2□□□□□ -2.09
HMG20AQ9NP66 AC107934.1-201ENST00000522215 217 ntBASIC2□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 100.9 ms