Protein–RNA interactions for Protein: Q9HD42

CHMP1A, Charged multivesicular body protein 1a, humanhuman

Predicted RBP Predictions only

Length 196 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1AQ9HD42 RNU6-572P-201ENST00000516724 80 ntBASIC2.88□□□□□ -1.95
CHMP1AQ9HD42 RN7SKP219-201ENST00000516825 296 ntBASIC2.88□□□□□ -1.95
CHMP1AQ9HD42 AP001893.2-201ENST00000526949 202 ntBASIC2.88□□□□□ -1.95
CHMP1AQ9HD42 AC016957.1-201ENST00000534895 309 ntBASIC2.88□□□□□ -1.95
CHMP1AQ9HD42 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC2.88□□□□□ -1.95
CHMP1AQ9HD42 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC2.88□□□□□ -1.95
CHMP1AQ9HD42 AC012507.3-201ENST00000603556 477 ntBASIC2.88□□□□□ -1.95
CHMP1AQ9HD42 AL355598.1-201ENST00000604169 202 ntBASIC2.88□□□□□ -1.95
CHMP1AQ9HD42 AF250324.2-201ENST00000608299 610 ntBASIC2.88□□□□□ -1.95
CHMP1AQ9HD42 AP001596.2-201ENST00000608410 312 ntBASIC2.88□□□□□ -1.95
CHMP1AQ9HD42 MIR6748-201ENST00000610433 71 ntBASIC2.88□□□□□ -1.95
CHMP1AQ9HD42 AC110079.1-202ENST00000635213 138 ntBASIC2.88□□□□□ -1.95
CHMP1AQ9HD42 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC2.88□□□□□ -1.95
CHMP1AQ9HD42 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC2.88□□□□□ -1.95
CHMP1AQ9HD42 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC2.88□□□□□ -1.95
CHMP1AQ9HD42 IL33-203ENST00000456383 2501 ntTSL 5 BASIC2.87□□□□□ -1.95
CHMP1AQ9HD42 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC2.87□□□□□ -1.95
CHMP1AQ9HD42 AL139276.1-201ENST00000311910 1001 ntBASIC2.87□□□□□ -1.95
CHMP1AQ9HD42 RN7SKP227-201ENST00000364445 330 ntBASIC2.87□□□□□ -1.95
CHMP1AQ9HD42 RNU6-395P-201ENST00000365662 106 ntBASIC2.87□□□□□ -1.95
CHMP1AQ9HD42 MDM4-202ENST00000367180 547 ntTSL 3 BASIC2.87□□□□□ -1.95
CHMP1AQ9HD42 AC068538.1-201ENST00000376856 336 ntBASIC2.87□□□□□ -1.95
CHMP1AQ9HD42 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC2.87□□□□□ -1.95
CHMP1AQ9HD42 RNU6-780P-201ENST00000391030 104 ntBASIC2.87□□□□□ -1.95
CHMP1AQ9HD42 SNORA40C-201ENST00000391285 128 ntBASIC2.87□□□□□ -1.95
CHMP1AQ9HD42 RN7SKP58-201ENST00000411010 305 ntBASIC2.87□□□□□ -1.95
CHMP1AQ9HD42 AL645937.1-202ENST00000421799 937 ntBASIC2.87□□□□□ -1.95
CHMP1AQ9HD42 AC098614.2-201ENST00000426040 255 ntBASIC2.87□□□□□ -1.95
CHMP1AQ9HD42 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC2.87□□□□□ -1.95
CHMP1AQ9HD42 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC2.87□□□□□ -1.95
CHMP1AQ9HD42 AL360271.2-201ENST00000447710 161 ntBASIC2.87□□□□□ -1.95
CHMP1AQ9HD42 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC2.87□□□□□ -1.95
CHMP1AQ9HD42 RPL37P4-201ENST00000448908 268 ntBASIC2.87□□□□□ -1.95
CHMP1AQ9HD42 FDX1P2-201ENST00000450769 375 ntBASIC2.87□□□□□ -1.95
CHMP1AQ9HD42 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC2.87□□□□□ -1.95
CHMP1AQ9HD42 CACYBPP2-201ENST00000453625 678 ntBASIC2.87□□□□□ -1.95
CHMP1AQ9HD42 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC2.87□□□□□ -1.95
CHMP1AQ9HD42 AC092798.1-201ENST00000458542 409 ntBASIC2.87□□□□□ -1.95
CHMP1AQ9HD42 RNU7-63P-201ENST00000459054 62 ntBASIC2.87□□□□□ -1.95
CHMP1AQ9HD42 RN7SL385P-201ENST00000468873 276 ntBASIC2.87□□□□□ -1.95
CHMP1AQ9HD42 RPS27P26-201ENST00000494583 239 ntBASIC2.87□□□□□ -1.95
CHMP1AQ9HD42 AC019235.1-201ENST00000503847 207 ntBASIC2.87□□□□□ -1.95
CHMP1AQ9HD42 MTCO3P9-201ENST00000506989 781 ntBASIC2.87□□□□□ -1.95
CHMP1AQ9HD42 AC009646.1-201ENST00000510455 318 ntBASIC2.87□□□□□ -1.95
CHMP1AQ9HD42 AC112206.3-201ENST00000514578 389 ntBASIC2.87□□□□□ -1.95
CHMP1AQ9HD42 AC105417.1-201ENST00000514691 285 ntBASIC2.87□□□□□ -1.95
CHMP1AQ9HD42 SNORA31.19-201ENST00000517079 126 ntBASIC2.87□□□□□ -1.95
CHMP1AQ9HD42 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC2.87□□□□□ -1.95
CHMP1AQ9HD42 AC007991.1-201ENST00000522680 631 ntBASIC2.87□□□□□ -1.95
CHMP1AQ9HD42 PSMA2P1-201ENST00000526365 646 ntBASIC2.87□□□□□ -1.95
CHMP1AQ9HD42 AC104383.1-201ENST00000530297 370 ntBASIC2.87□□□□□ -1.95
CHMP1AQ9HD42 OR5B10P-201ENST00000532869 642 ntBASIC2.87□□□□□ -1.95
CHMP1AQ9HD42 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC2.87□□□□□ -1.95
CHMP1AQ9HD42 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC2.87□□□□□ -1.95
CHMP1AQ9HD42 CYCSP39-201ENST00000565821 309 ntBASIC2.87□□□□□ -1.95
CHMP1AQ9HD42 AC015917.1-201ENST00000579654 510 ntBASIC2.87□□□□□ -1.95
CHMP1AQ9HD42 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC2.87□□□□□ -1.95
CHMP1AQ9HD42 AL136295.6-201ENST00000610486 658 ntBASIC2.87□□□□□ -1.95
CHMP1AQ9HD42 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC2.87□□□□□ -1.95
CHMP1AQ9HD42 AC098679.4-201ENST00000624241 654 ntBASIC2.87□□□□□ -1.95
CHMP1AQ9HD42 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC2.87□□□□□ -1.95
CHMP1AQ9HD42 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
CHMP1AQ9HD42 AC110491.1-201ENST00000562191 2010 ntBASIC2.86□□□□□ -1.95
CHMP1AQ9HD42 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC2.86□□□□□ -1.95
CHMP1AQ9HD42 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
CHMP1AQ9HD42 SNORD3E-201ENST00000362899 217 ntBASIC2.86□□□□□ -1.95
CHMP1AQ9HD42 SNORA51.4-201ENST00000364993 124 ntBASIC2.86□□□□□ -1.95
CHMP1AQ9HD42 RNU6-1027P-201ENST00000383998 107 ntBASIC2.86□□□□□ -1.95
CHMP1AQ9HD42 RNU6-166P-201ENST00000384371 107 ntBASIC2.86□□□□□ -1.95
CHMP1AQ9HD42 RNA5SP44-201ENST00000410446 133 ntBASIC2.86□□□□□ -1.95
CHMP1AQ9HD42 USP9YP6-201ENST00000413550 854 ntBASIC2.86□□□□□ -1.95
CHMP1AQ9HD42 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC2.86□□□□□ -1.95
CHMP1AQ9HD42 RPL7P10-201ENST00000417407 739 ntBASIC2.86□□□□□ -1.95
CHMP1AQ9HD42 AL139281.1-201ENST00000422120 335 ntBASIC2.86□□□□□ -1.95
CHMP1AQ9HD42 MTCYBP8-201ENST00000422855 651 ntBASIC2.86□□□□□ -1.95
CHMP1AQ9HD42 HMGB1P9-201ENST00000429856 646 ntBASIC2.86□□□□□ -1.95
CHMP1AQ9HD42 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC2.86□□□□□ -1.95
CHMP1AQ9HD42 RPS15AP5-201ENST00000436276 388 ntBASIC2.86□□□□□ -1.95
CHMP1AQ9HD42 RPL21P2-201ENST00000440049 481 ntBASIC2.86□□□□□ -1.95
CHMP1AQ9HD42 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC2.86□□□□□ -1.95
CHMP1AQ9HD42 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC2.86□□□□□ -1.95
CHMP1AQ9HD42 AC027673.1-201ENST00000456245 405 ntBASIC2.86□□□□□ -1.95
CHMP1AQ9HD42 SRRM1P2-201ENST00000464531 1192 ntBASIC2.86□□□□□ -1.95
CHMP1AQ9HD42 GMFBP1-201ENST00000467831 427 ntBASIC2.86□□□□□ -1.95
CHMP1AQ9HD42 MTND4LP31-201ENST00000514859 294 ntBASIC2.86□□□□□ -1.95
CHMP1AQ9HD42 SNORA40.12-201ENST00000516329 111 ntBASIC2.86□□□□□ -1.95
CHMP1AQ9HD42 RNU6-1183P-201ENST00000517054 60 ntBASIC2.86□□□□□ -1.95
CHMP1AQ9HD42 AC022634.1-201ENST00000520765 532 ntBASIC2.86□□□□□ -1.95
CHMP1AQ9HD42 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC2.86□□□□□ -1.95
CHMP1AQ9HD42 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
CHMP1AQ9HD42 AHI1-217ENST00000534469 680 ntTSL 3 BASIC2.86□□□□□ -1.95
CHMP1AQ9HD42 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC2.86□□□□□ -1.95
CHMP1AQ9HD42 MIR548AC-201ENST00000585049 88 ntBASIC2.86□□□□□ -1.95
CHMP1AQ9HD42 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC2.86□□□□□ -1.95
CHMP1AQ9HD42 AL109618.2-201ENST00000605527 211 ntBASIC2.86□□□□□ -1.95
CHMP1AQ9HD42 AC008945.2-201ENST00000606056 604 ntBASIC2.86□□□□□ -1.95
CHMP1AQ9HD42 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC2.86□□□□□ -1.95
CHMP1AQ9HD42 U6.99-201ENST00000637524 83 ntBASIC2.86□□□□□ -1.95
CHMP1AQ9HD42 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
CHMP1AQ9HD42 AC006020.1-201ENST00000420179 1854 ntBASIC2.86□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 86.4 ms