Protein–RNA interactions for Protein: Q9H321

VCX3B, Variable charge X-linked protein 3B, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3BQ9H321 RNU5B-4P-201ENST00000363508 111 ntBASIC1.48□□□□□ -2.17
VCX3BQ9H321 RNU6-236P-201ENST00000363886 106 ntBASIC1.48□□□□□ -2.17
VCX3BQ9H321 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC1.48□□□□□ -2.17
VCX3BQ9H321 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC1.48□□□□□ -2.17
VCX3BQ9H321 AL603865.2-201ENST00000401679 213 ntBASIC1.48□□□□□ -2.17
VCX3BQ9H321 RNU2-42P-201ENST00000410697 113 ntBASIC1.48□□□□□ -2.17
VCX3BQ9H321 TPMTP3-201ENST00000411928 735 ntBASIC1.48□□□□□ -2.17
VCX3BQ9H321 TPMTP2-201ENST00000414372 726 ntBASIC1.48□□□□□ -2.17
VCX3BQ9H321 RPL30P13-201ENST00000418873 348 ntBASIC1.48□□□□□ -2.17
VCX3BQ9H321 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC1.48□□□□□ -2.17
VCX3BQ9H321 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC1.48□□□□□ -2.17
VCX3BQ9H321 C1DP1-201ENST00000426049 402 ntBASIC1.48□□□□□ -2.17
VCX3BQ9H321 AC244035.1-201ENST00000430042 390 ntBASIC1.48□□□□□ -2.17
VCX3BQ9H321 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC1.48□□□□□ -2.17
VCX3BQ9H321 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC1.48□□□□□ -2.17
VCX3BQ9H321 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC1.48□□□□□ -2.17
VCX3BQ9H321 FABP5P13-201ENST00000452144 328 ntBASIC1.48□□□□□ -2.17
VCX3BQ9H321 RNA5SP57-201ENST00000459463 123 ntBASIC1.48□□□□□ -2.17
VCX3BQ9H321 RPS20P20-201ENST00000460498 340 ntBASIC1.48□□□□□ -2.17
VCX3BQ9H321 RPS29P11-201ENST00000496507 171 ntBASIC1.48□□□□□ -2.17
VCX3BQ9H321 AC093801.2-201ENST00000503966 1050 ntBASIC1.48□□□□□ -2.17
VCX3BQ9H321 AC008837.1-201ENST00000511513 412 ntBASIC1.48□□□□□ -2.17
VCX3BQ9H321 SNORD19.2-201ENST00000516978 73 ntBASIC1.48□□□□□ -2.17
VCX3BQ9H321 AC034114.1-201ENST00000520293 285 ntBASIC1.48□□□□□ -2.17
VCX3BQ9H321 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC1.48□□□□□ -2.17
VCX3BQ9H321 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
VCX3BQ9H321 AC009097.3-201ENST00000563557 1018 ntBASIC1.48□□□□□ -2.17
VCX3BQ9H321 MIR1273D-201ENST00000577266 86 ntBASIC1.48□□□□□ -2.17
VCX3BQ9H321 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC1.48□□□□□ -2.17
VCX3BQ9H321 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
VCX3BQ9H321 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC1.48□□□□□ -2.17
VCX3BQ9H321 AC136601.2-201ENST00000604356 474 ntBASIC1.48□□□□□ -2.17
VCX3BQ9H321 AC069304.2-201ENST00000605154 435 ntBASIC1.48□□□□□ -2.17
VCX3BQ9H321 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
VCX3BQ9H321 AP005901.5-201ENST00000545779 1796 ntBASIC1.47□□□□□ -2.17
VCX3BQ9H321 UBE2L2-201ENST00000254302 429 ntBASIC1.47□□□□□ -2.17
VCX3BQ9H321 AL160275.3-201ENST00000423876 471 ntBASIC1.47□□□□□ -2.17
VCX3BQ9H321 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC1.47□□□□□ -2.17
VCX3BQ9H321 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
VCX3BQ9H321 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC1.47□□□□□ -2.17
VCX3BQ9H321 HMGN2P23-201ENST00000456759 269 ntBASIC1.47□□□□□ -2.17
VCX3BQ9H321 AC106872.3-201ENST00000495104 446 ntBASIC1.47□□□□□ -2.17
VCX3BQ9H321 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC1.47□□□□□ -2.17
VCX3BQ9H321 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC1.47□□□□□ -2.17
VCX3BQ9H321 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
VCX3BQ9H321 RNU6-714P-201ENST00000516963 103 ntBASIC1.47□□□□□ -2.17
VCX3BQ9H321 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC1.47□□□□□ -2.17
VCX3BQ9H321 AC104417.1-201ENST00000523974 751 ntBASIC1.47□□□□□ -2.17
VCX3BQ9H321 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.47□□□□□ -2.17
VCX3BQ9H321 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
VCX3BQ9H321 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC1.47□□□□□ -2.17
VCX3BQ9H321 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC1.47□□□□□ -2.17
VCX3BQ9H321 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC1.47□□□□□ -2.17
VCX3BQ9H321 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC1.47□□□□□ -2.17
VCX3BQ9H321 AC007495.2-201ENST00000562822 459 ntTSL 3 BASIC1.47□□□□□ -2.17
VCX3BQ9H321 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
VCX3BQ9H321 AC069545.1-201ENST00000605671 358 ntBASIC1.47□□□□□ -2.17
VCX3BQ9H321 AC018638.7-201ENST00000605836 1114 ntBASIC1.47□□□□□ -2.17
VCX3BQ9H321 AC096577.2-201ENST00000611455 153 ntBASIC1.47□□□□□ -2.17
VCX3BQ9H321 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC1.47□□□□□ -2.17
VCX3BQ9H321 AL357080.1-201ENST00000617394 239 ntBASIC1.47□□□□□ -2.17
VCX3BQ9H321 AL445264.1-201ENST00000621719 171 ntBASIC1.47□□□□□ -2.17
VCX3BQ9H321 AC068880.4-201ENST00000623082 495 ntBASIC1.47□□□□□ -2.17
VCX3BQ9H321 AC006927.2-201ENST00000639256 389 ntBASIC1.47□□□□□ -2.17
VCX3BQ9H321 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
VCX3BQ9H321 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC1.47□□□□□ -2.17
VCX3BQ9H321 ZNF29P-201ENST00000225587 168 ntBASIC1.46□□□□□ -2.18
VCX3BQ9H321 MIR424-201ENST00000362227 98 ntBASIC1.46□□□□□ -2.18
VCX3BQ9H321 RNU6-1078P-201ENST00000364522 103 ntBASIC1.46□□□□□ -2.18
VCX3BQ9H321 RNU6-359P-201ENST00000365466 108 ntBASIC1.46□□□□□ -2.18
VCX3BQ9H321 RNU6-637P-201ENST00000384050 107 ntBASIC1.46□□□□□ -2.18
VCX3BQ9H321 MIR9-3-201ENST00000385084 90 ntBASIC1.46□□□□□ -2.18
VCX3BQ9H321 NDUFS5P4-201ENST00000412983 318 ntBASIC1.46□□□□□ -2.18
VCX3BQ9H321 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC1.46□□□□□ -2.18
VCX3BQ9H321 BX119904.4-201ENST00000424402 301 ntBASIC1.46□□□□□ -2.18
VCX3BQ9H321 ZNF736P7Y-201ENST00000425158 820 ntBASIC1.46□□□□□ -2.18
VCX3BQ9H321 VN1R108P-201ENST00000431580 830 ntBASIC1.46□□□□□ -2.18
VCX3BQ9H321 PTGES3P1-201ENST00000439531 483 ntBASIC1.46□□□□□ -2.18
VCX3BQ9H321 AC002381.1-201ENST00000447049 280 ntBASIC1.46□□□□□ -2.18
VCX3BQ9H321 ARPC3P5-201ENST00000448802 534 ntBASIC1.46□□□□□ -2.18
VCX3BQ9H321 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC1.46□□□□□ -2.18
VCX3BQ9H321 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC1.46□□□□□ -2.18
VCX3BQ9H321 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC1.46□□□□□ -2.18
VCX3BQ9H321 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.46□□□□□ -2.18
VCX3BQ9H321 AC096576.1-201ENST00000489014 359 ntBASIC1.46□□□□□ -2.18
VCX3BQ9H321 RPS27AP10-201ENST00000496103 208 ntBASIC1.46□□□□□ -2.18
VCX3BQ9H321 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC1.46□□□□□ -2.18
VCX3BQ9H321 MTCO3P27-201ENST00000514397 196 ntBASIC1.46□□□□□ -2.18
VCX3BQ9H321 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC1.46□□□□□ -2.18
VCX3BQ9H321 RNA5SP165-201ENST00000517142 115 ntBASIC1.46□□□□□ -2.18
VCX3BQ9H321 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC1.46□□□□□ -2.18
VCX3BQ9H321 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC1.46□□□□□ -2.18
VCX3BQ9H321 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC1.46□□□□□ -2.18
VCX3BQ9H321 AP003049.1-201ENST00000529418 457 ntBASIC1.46□□□□□ -2.18
VCX3BQ9H321 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC1.46□□□□□ -2.18
VCX3BQ9H321 AC087897.1-201ENST00000550134 156 ntBASIC1.46□□□□□ -2.18
VCX3BQ9H321 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC1.46□□□□□ -2.18
VCX3BQ9H321 NACAP3-201ENST00000552100 481 ntBASIC1.46□□□□□ -2.18
VCX3BQ9H321 SUB1P3-201ENST00000564581 315 ntBASIC1.46□□□□□ -2.18
VCX3BQ9H321 MIR4429-201ENST00000580105 73 ntBASIC1.46□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 98.2 ms