Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
RPAP1Q9BWH6 PCF11-AS1-201ENST00000602322 1516 ntBASIC2.48□□□□□ -2.01
RPAP1Q9BWH6 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.48□□□□□ -2.01
RPAP1Q9BWH6 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.48□□□□□ -2.01
RPAP1Q9BWH6 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC2.48□□□□□ -2.01
RPAP1Q9BWH6 MTND5P33-201ENST00000571250 1450 ntBASIC2.48□□□□□ -2.01
RPAP1Q9BWH6 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC2.48□□□□□ -2.01
RPAP1Q9BWH6 PIGPP2-201ENST00000411569 458 ntBASIC2.48□□□□□ -2.01
RPAP1Q9BWH6 MTCO2P8-201ENST00000412213 658 ntBASIC2.48□□□□□ -2.01
RPAP1Q9BWH6 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC2.48□□□□□ -2.01
RPAP1Q9BWH6 GTF2IP20-201ENST00000431663 360 ntBASIC2.48□□□□□ -2.01
RPAP1Q9BWH6 USP9YP8-201ENST00000441913 500 ntBASIC2.48□□□□□ -2.01
RPAP1Q9BWH6 MTCO3P45-201ENST00000443036 613 ntBASIC2.48□□□□□ -2.01
RPAP1Q9BWH6 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC2.48□□□□□ -2.01
RPAP1Q9BWH6 MRPS17P3-201ENST00000465453 385 ntBASIC2.48□□□□□ -2.01
RPAP1Q9BWH6 AC090255.1-201ENST00000495779 349 ntBASIC2.48□□□□□ -2.01
RPAP1Q9BWH6 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC2.48□□□□□ -2.01
RPAP1Q9BWH6 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
RPAP1Q9BWH6 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC2.48□□□□□ -2.01
RPAP1Q9BWH6 SUMO2P6-201ENST00000505273 288 ntBASIC2.48□□□□□ -2.01
RPAP1Q9BWH6 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC2.48□□□□□ -2.01
RPAP1Q9BWH6 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC2.48□□□□□ -2.01
RPAP1Q9BWH6 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC2.48□□□□□ -2.01
RPAP1Q9BWH6 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC2.48□□□□□ -2.01
RPAP1Q9BWH6 AC005498.1-201ENST00000592125 465 ntBASIC2.48□□□□□ -2.01
RPAP1Q9BWH6 VN1R82P-201ENST00000601481 356 ntBASIC2.48□□□□□ -2.01
RPAP1Q9BWH6 MTND4LP5-201ENST00000605152 292 ntBASIC2.48□□□□□ -2.01
RPAP1Q9BWH6 AC009974.1-201ENST00000608881 455 ntBASIC2.48□□□□□ -2.01
RPAP1Q9BWH6 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC2.48□□□□□ -2.01
RPAP1Q9BWH6 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
RPAP1Q9BWH6 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.47□□□□□ -2.01
RPAP1Q9BWH6 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.47□□□□□ -2.01
RPAP1Q9BWH6 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.47□□□□□ -2.01
RPAP1Q9BWH6 MIR627-201ENST00000384979 97 ntBASIC2.47□□□□□ -2.01
RPAP1Q9BWH6 RNU6-757P-201ENST00000410334 100 ntBASIC2.47□□□□□ -2.01
RPAP1Q9BWH6 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC2.47□□□□□ -2.01
RPAP1Q9BWH6 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC2.47□□□□□ -2.01
RPAP1Q9BWH6 AL358075.3-201ENST00000426289 226 ntBASIC2.47□□□□□ -2.01
RPAP1Q9BWH6 RPL12P25-201ENST00000455592 494 ntBASIC2.47□□□□□ -2.01
RPAP1Q9BWH6 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC2.47□□□□□ -2.01
RPAP1Q9BWH6 RBM43P1-201ENST00000476891 1081 ntBASIC2.47□□□□□ -2.01
RPAP1Q9BWH6 AC072039.1-201ENST00000477611 581 ntBASIC2.47□□□□□ -2.01
RPAP1Q9BWH6 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC2.47□□□□□ -2.01
RPAP1Q9BWH6 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC2.47□□□□□ -2.01
RPAP1Q9BWH6 RNU6-390P-201ENST00000516259 103 ntBASIC2.47□□□□□ -2.01
RPAP1Q9BWH6 GLYCAM1-201ENST00000546596 285 ntBASIC2.47□□□□□ -2.01
RPAP1Q9BWH6 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC2.47□□□□□ -2.01
RPAP1Q9BWH6 AC087465.1-201ENST00000560574 245 ntBASIC2.47□□□□□ -2.01
RPAP1Q9BWH6 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC2.47□□□□□ -2.01
RPAP1Q9BWH6 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
RPAP1Q9BWH6 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC2.47□□□□□ -2.01
RPAP1Q9BWH6 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC2.47□□□□□ -2.01
RPAP1Q9BWH6 AC112204.3-201ENST00000623822 332 ntBASIC2.47□□□□□ -2.01
RPAP1Q9BWH6 AL356596.1-201ENST00000624230 379 ntBASIC2.47□□□□□ -2.01
RPAP1Q9BWH6 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC2.47□□□□□ -2.01
RPAP1Q9BWH6 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
RPAP1Q9BWH6 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
RPAP1Q9BWH6 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
RPAP1Q9BWH6 MAPK10-266ENST00000641066 6555 ntBASIC2.46□□□□□ -2.02
RPAP1Q9BWH6 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
RPAP1Q9BWH6 AL359704.1-201ENST00000411586 781 ntBASIC2.46□□□□□ -2.02
RPAP1Q9BWH6 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC2.46□□□□□ -2.02
RPAP1Q9BWH6 MTCO3P30-201ENST00000426425 670 ntBASIC2.46□□□□□ -2.02
RPAP1Q9BWH6 AL445669.1-201ENST00000426743 755 ntBASIC2.46□□□□□ -2.02
RPAP1Q9BWH6 RSU1P2-202ENST00000437884 485 ntBASIC2.46□□□□□ -2.02
RPAP1Q9BWH6 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC2.46□□□□□ -2.02
RPAP1Q9BWH6 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
RPAP1Q9BWH6 DPPA3P1-201ENST00000448050 469 ntBASIC2.46□□□□□ -2.02
RPAP1Q9BWH6 DUXAP8-207ENST00000456786 622 ntBASIC2.46□□□□□ -2.02
RPAP1Q9BWH6 AC025033.1-201ENST00000463883 194 ntBASIC2.46□□□□□ -2.02
RPAP1Q9BWH6 AC109486.1-201ENST00000486833 374 ntBASIC2.46□□□□□ -2.02
RPAP1Q9BWH6 AL160314.1-201ENST00000490836 438 ntBASIC2.46□□□□□ -2.02
RPAP1Q9BWH6 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC2.46□□□□□ -2.02
RPAP1Q9BWH6 AC114786.4-201ENST00000508771 728 ntBASIC2.46□□□□□ -2.02
RPAP1Q9BWH6 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC2.46□□□□□ -2.02
RPAP1Q9BWH6 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC2.46□□□□□ -2.02
RPAP1Q9BWH6 AC114797.1-201ENST00000514003 728 ntBASIC2.46□□□□□ -2.02
RPAP1Q9BWH6 AC110760.3-202ENST00000515177 371 ntBASIC2.46□□□□□ -2.02
RPAP1Q9BWH6 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC2.46□□□□□ -2.02
RPAP1Q9BWH6 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
RPAP1Q9BWH6 EMP1-206ENST00000537612 505 ntTSL 3 BASIC2.46□□□□□ -2.02
RPAP1Q9BWH6 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC2.46□□□□□ -2.02
RPAP1Q9BWH6 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC2.46□□□□□ -2.02
RPAP1Q9BWH6 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC2.46□□□□□ -2.02
RPAP1Q9BWH6 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC2.46□□□□□ -2.02
RPAP1Q9BWH6 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC2.46□□□□□ -2.02
RPAP1Q9BWH6 AC097468.3-201ENST00000607956 456 ntBASIC2.46□□□□□ -2.02
RPAP1Q9BWH6 AC239868.4-201ENST00000608318 671 ntBASIC2.46□□□□□ -2.02
RPAP1Q9BWH6 MIR6840-201ENST00000611937 71 ntBASIC2.46□□□□□ -2.02
RPAP1Q9BWH6 AC079395.3-201ENST00000615161 484 ntBASIC2.46□□□□□ -2.02
RPAP1Q9BWH6 DLEU1_2.1-201ENST00000617920 342 ntBASIC2.46□□□□□ -2.02
RPAP1Q9BWH6 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC2.46□□□□□ -2.02
RPAP1Q9BWH6 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC2.46□□□□□ -2.02
RPAP1Q9BWH6 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.45□□□□□ -2.02
RPAP1Q9BWH6 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
RPAP1Q9BWH6 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC2.45□□□□□ -2.02
RPAP1Q9BWH6 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC2.45□□□□□ -2.02
RPAP1Q9BWH6 AC106754.1-201ENST00000562632 1513 ntBASIC2.45□□□□□ -2.02
RPAP1Q9BWH6 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC2.45□□□□□ -2.02
RPAP1Q9BWH6 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC2.45□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 119.1 ms