Protein–RNA interactions for Protein: Q9BUN5

CCDC28B, Coiled-coil domain-containing protein 28B, humanhuman

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28BQ9BUN5 IL33-203ENST00000456383 2501 ntTSL 5 BASIC2.65□□□□□ -1.99
CCDC28BQ9BUN5 OR5J1P-201ENST00000313544 939 ntBASIC2.65□□□□□ -1.99
CCDC28BQ9BUN5 RNU6-960P-201ENST00000364056 120 ntBASIC2.65□□□□□ -1.99
CCDC28BQ9BUN5 Y_RNA.296-201ENST00000364930 108 ntBASIC2.65□□□□□ -1.99
CCDC28BQ9BUN5 RNU6-108P-201ENST00000365558 107 ntBASIC2.65□□□□□ -1.99
CCDC28BQ9BUN5 RNU5E-6P-201ENST00000365574 115 ntBASIC2.65□□□□□ -1.99
CCDC28BQ9BUN5 RNU6-192P-201ENST00000391253 100 ntBASIC2.65□□□□□ -1.99
CCDC28BQ9BUN5 FGFR1OP2P1-201ENST00000395943 500 ntBASIC2.65□□□□□ -1.99
CCDC28BQ9BUN5 RNA5SP120-201ENST00000410900 112 ntBASIC2.65□□□□□ -1.99
CCDC28BQ9BUN5 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC2.65□□□□□ -1.99
CCDC28BQ9BUN5 ZNF90P2-204ENST00000419323 1075 ntBASIC2.65□□□□□ -1.99
CCDC28BQ9BUN5 AC007283.2-201ENST00000424739 197 ntBASIC2.65□□□□□ -1.99
CCDC28BQ9BUN5 MED13P1-201ENST00000428342 171 ntBASIC2.65□□□□□ -1.99
CCDC28BQ9BUN5 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC2.65□□□□□ -1.99
CCDC28BQ9BUN5 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC2.65□□□□□ -1.99
CCDC28BQ9BUN5 RPS12P2-201ENST00000439728 269 ntBASIC2.65□□□□□ -1.99
CCDC28BQ9BUN5 MTND1P1-201ENST00000445453 368 ntBASIC2.65□□□□□ -1.99
CCDC28BQ9BUN5 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
CCDC28BQ9BUN5 AC079781.2-201ENST00000446424 169 ntBASIC2.65□□□□□ -1.99
CCDC28BQ9BUN5 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC2.65□□□□□ -1.99
CCDC28BQ9BUN5 AC020550.1-201ENST00000447385 163 ntBASIC2.65□□□□□ -1.99
CCDC28BQ9BUN5 AC132479.1-201ENST00000449160 144 ntBASIC2.65□□□□□ -1.99
CCDC28BQ9BUN5 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC2.65□□□□□ -1.99
CCDC28BQ9BUN5 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC2.65□□□□□ -1.99
CCDC28BQ9BUN5 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC2.65□□□□□ -1.99
CCDC28BQ9BUN5 RN7SL432P-201ENST00000484057 298 ntBASIC2.65□□□□□ -1.99
CCDC28BQ9BUN5 AC107401.1-201ENST00000503426 685 ntBASIC2.65□□□□□ -1.99
CCDC28BQ9BUN5 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC2.65□□□□□ -1.99
CCDC28BQ9BUN5 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC2.65□□□□□ -1.99
CCDC28BQ9BUN5 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.65□□□□□ -1.99
CCDC28BQ9BUN5 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.65□□□□□ -1.99
CCDC28BQ9BUN5 RNU6-390P-201ENST00000516259 103 ntBASIC2.65□□□□□ -1.99
CCDC28BQ9BUN5 NRON-201ENST00000517270 370 ntBASIC2.65□□□□□ -1.99
CCDC28BQ9BUN5 AC090572.1-201ENST00000519251 160 ntBASIC2.65□□□□□ -1.99
CCDC28BQ9BUN5 RGS4-209ENST00000531057 544 ntTSL 4 BASIC2.65□□□□□ -1.99
CCDC28BQ9BUN5 ARL2BPP2-201ENST00000550907 489 ntBASIC2.65□□□□□ -1.99
CCDC28BQ9BUN5 MIR5194-201ENST00000582634 120 ntBASIC2.65□□□□□ -1.99
CCDC28BQ9BUN5 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC2.65□□□□□ -1.99
CCDC28BQ9BUN5 RPL23AP78-201ENST00000599928 470 ntBASIC2.65□□□□□ -1.99
CCDC28BQ9BUN5 AC068790.6-201ENST00000602558 258 ntBASIC2.65□□□□□ -1.99
CCDC28BQ9BUN5 AC080078.2-201ENST00000603766 501 ntBASIC2.65□□□□□ -1.99
CCDC28BQ9BUN5 AP002360.4-201ENST00000606980 481 ntBASIC2.65□□□□□ -1.99
CCDC28BQ9BUN5 AC009570.1-201ENST00000609599 745 ntBASIC2.65□□□□□ -1.99
CCDC28BQ9BUN5 AC013562.2-201ENST00000611632 603 ntBASIC2.65□□□□□ -1.99
CCDC28BQ9BUN5 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC2.65□□□□□ -1.99
CCDC28BQ9BUN5 MIR6076-201ENST00000617521 113 ntBASIC2.65□□□□□ -1.99
CCDC28BQ9BUN5 AC138649.3-201ENST00000622154 254 ntBASIC2.65□□□□□ -1.99
CCDC28BQ9BUN5 AC068880.5-201ENST00000624331 290 ntBASIC2.65□□□□□ -1.99
CCDC28BQ9BUN5 AC099654.12-201ENST00000639868 649 ntBASIC2.65□□□□□ -1.99
CCDC28BQ9BUN5 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
CCDC28BQ9BUN5 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
CCDC28BQ9BUN5 AC000403.1-201ENST00000613696 3585 ntBASIC2.65□□□□□ -1.99
CCDC28BQ9BUN5 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
CCDC28BQ9BUN5 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC2.64□□□□□ -1.99
CCDC28BQ9BUN5 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC2.64□□□□□ -1.99
CCDC28BQ9BUN5 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
CCDC28BQ9BUN5 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.64□□□□□ -1.99
CCDC28BQ9BUN5 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.64□□□□□ -1.99
CCDC28BQ9BUN5 AC073343.1-201ENST00000328239 651 ntBASIC2.64□□□□□ -1.99
CCDC28BQ9BUN5 RNU6-181P-201ENST00000363225 107 ntBASIC2.64□□□□□ -1.99
CCDC28BQ9BUN5 RNA5SP267-201ENST00000364893 126 ntBASIC2.64□□□□□ -1.99
CCDC28BQ9BUN5 RN7SKP226-201ENST00000364912 300 ntBASIC2.64□□□□□ -1.99
CCDC28BQ9BUN5 MIR558-201ENST00000384920 94 ntBASIC2.64□□□□□ -1.99
CCDC28BQ9BUN5 EIF4EBP2P3-201ENST00000403144 334 ntBASIC2.64□□□□□ -1.99
CCDC28BQ9BUN5 RNU2-36P-201ENST00000410361 191 ntBASIC2.64□□□□□ -1.99
CCDC28BQ9BUN5 RNU2-25P-201ENST00000411041 191 ntBASIC2.64□□□□□ -1.99
CCDC28BQ9BUN5 RN7SKP140-201ENST00000411196 284 ntBASIC2.64□□□□□ -1.99
CCDC28BQ9BUN5 AL513331.1-201ENST00000411908 397 ntBASIC2.64□□□□□ -1.99
CCDC28BQ9BUN5 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC2.64□□□□□ -1.99
CCDC28BQ9BUN5 AL451054.2-201ENST00000420896 202 ntBASIC2.64□□□□□ -1.99
CCDC28BQ9BUN5 RAC1P6-201ENST00000423911 575 ntBASIC2.64□□□□□ -1.99
CCDC28BQ9BUN5 AL590383.1-201ENST00000428602 75 ntBASIC2.64□□□□□ -1.99
CCDC28BQ9BUN5 MTCO2P11-201ENST00000431069 680 ntBASIC2.64□□□□□ -1.99
CCDC28BQ9BUN5 MTND3P21-201ENST00000433774 331 ntBASIC2.64□□□□□ -1.99
CCDC28BQ9BUN5 GPR143P-201ENST00000434155 205 ntBASIC2.64□□□□□ -1.99
CCDC28BQ9BUN5 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC2.64□□□□□ -1.99
CCDC28BQ9BUN5 RPS20P5-201ENST00000434808 360 ntBASIC2.64□□□□□ -1.99
CCDC28BQ9BUN5 HMGB3P12-201ENST00000438745 556 ntBASIC2.64□□□□□ -1.99
CCDC28BQ9BUN5 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC2.64□□□□□ -1.99
CCDC28BQ9BUN5 PRDX3P3-201ENST00000447765 522 ntBASIC2.64□□□□□ -1.99
CCDC28BQ9BUN5 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC2.64□□□□□ -1.99
CCDC28BQ9BUN5 MTND2P24-201ENST00000453434 806 ntBASIC2.64□□□□□ -1.99
CCDC28BQ9BUN5 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC2.64□□□□□ -1.99
CCDC28BQ9BUN5 SRIP1-201ENST00000489235 288 ntBASIC2.64□□□□□ -1.99
CCDC28BQ9BUN5 RN7SL504P-201ENST00000494496 287 ntBASIC2.64□□□□□ -1.99
CCDC28BQ9BUN5 RNU6-445P-201ENST00000516949 107 ntBASIC2.64□□□□□ -1.99
CCDC28BQ9BUN5 RNU6-1092P-201ENST00000516955 87 ntBASIC2.64□□□□□ -1.99
CCDC28BQ9BUN5 RNU6-410P-201ENST00000517006 107 ntBASIC2.64□□□□□ -1.99
CCDC28BQ9BUN5 RN7SKP258-201ENST00000517151 304 ntBASIC2.64□□□□□ -1.99
CCDC28BQ9BUN5 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC2.64□□□□□ -1.99
CCDC28BQ9BUN5 AP001804.3-201ENST00000525146 880 ntBASIC2.64□□□□□ -1.99
CCDC28BQ9BUN5 MGST1-215ENST00000540056 546 ntTSL 3 BASIC2.64□□□□□ -1.99
CCDC28BQ9BUN5 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC2.64□□□□□ -1.99
CCDC28BQ9BUN5 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC2.64□□□□□ -1.99
CCDC28BQ9BUN5 GLUD1P4-201ENST00000590914 418 ntBASIC2.64□□□□□ -1.99
CCDC28BQ9BUN5 AC146944.4-201ENST00000602697 718 ntBASIC2.64□□□□□ -1.99
CCDC28BQ9BUN5 HNRNPDLP4-201ENST00000605144 301 ntBASIC2.64□□□□□ -1.99
CCDC28BQ9BUN5 AL138880.2-201ENST00000616214 239 ntBASIC2.64□□□□□ -1.99
CCDC28BQ9BUN5 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC2.64□□□□□ -1.99
CCDC28BQ9BUN5 OR5AK4P-201ENST00000635912 903 ntBASIC2.64□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 109.4 ms