Protein–RNA interactions for Protein: Q9BTX1

NDC1, Nucleoporin NDC1, humanhuman

Predictions only

Length 674 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDC1Q9BTX1 AC002545.1-201ENST00000592511 181 ntBASIC3.83□□□□□ -1.8
NDC1Q9BTX1 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
NDC1Q9BTX1 AC064801.1-201ENST00000612025 407 ntBASIC3.83□□□□□ -1.8
NDC1Q9BTX1 AC083806.3-201ENST00000614016 455 ntBASIC3.83□□□□□ -1.8
NDC1Q9BTX1 PISRT1.1-201ENST00000616930 107 ntBASIC3.83□□□□□ -1.8
NDC1Q9BTX1 AC092608.2-201ENST00000624427 218 ntBASIC3.83□□□□□ -1.8
NDC1Q9BTX1 CCT7-217ENST00000626868 249 ntTSL 5 BASIC3.83□□□□□ -1.8
NDC1Q9BTX1 MTND5P1-201ENST00000445440 1375 ntBASIC3.83□□□□□ -1.8
NDC1Q9BTX1 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC3.83□□□□□ -1.8
NDC1Q9BTX1 OR4G2P-202ENST00000641004 1759 ntBASIC3.83□□□□□ -1.8
NDC1Q9BTX1 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
NDC1Q9BTX1 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC3.83□□□□□ -1.8
NDC1Q9BTX1 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
NDC1Q9BTX1 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC3.83□□□□□ -1.8
NDC1Q9BTX1 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
NDC1Q9BTX1 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.82□□□□□ -1.8
NDC1Q9BTX1 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC3.82□□□□□ -1.8
NDC1Q9BTX1 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
NDC1Q9BTX1 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
NDC1Q9BTX1 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
NDC1Q9BTX1 SNORD3E-201ENST00000362899 217 ntBASIC3.82□□□□□ -1.8
NDC1Q9BTX1 RNU6-574P-201ENST00000384265 107 ntBASIC3.82□□□□□ -1.8
NDC1Q9BTX1 MIR670-201ENST00000390142 98 ntBASIC3.82□□□□□ -1.8
NDC1Q9BTX1 MIR1251-201ENST00000408552 70 ntBASIC3.82□□□□□ -1.8
NDC1Q9BTX1 Y_RNA.605-201ENST00000410577 105 ntBASIC3.82□□□□□ -1.8
NDC1Q9BTX1 RNA5SP306-201ENST00000411087 107 ntBASIC3.82□□□□□ -1.8
NDC1Q9BTX1 CYCSP19-201ENST00000411715 316 ntBASIC3.82□□□□□ -1.8
NDC1Q9BTX1 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC3.82□□□□□ -1.8
NDC1Q9BTX1 AC018865.2-201ENST00000423631 129 ntBASIC3.82□□□□□ -1.8
NDC1Q9BTX1 AL160004.2-201ENST00000432935 350 ntBASIC3.82□□□□□ -1.8
NDC1Q9BTX1 HIGD1AP11-201ENST00000438361 280 ntBASIC3.82□□□□□ -1.8
NDC1Q9BTX1 RPL21P23-201ENST00000446654 460 ntBASIC3.82□□□□□ -1.8
NDC1Q9BTX1 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC3.82□□□□□ -1.8
NDC1Q9BTX1 AC087588.1-201ENST00000462203 316 ntBASIC3.82□□□□□ -1.8
NDC1Q9BTX1 AC034236.1-201ENST00000469891 373 ntBASIC3.82□□□□□ -1.8
NDC1Q9BTX1 AL135752.1-201ENST00000479477 471 ntBASIC3.82□□□□□ -1.8
NDC1Q9BTX1 TAF8-207ENST00000482432 556 ntTSL 2 BASIC3.82□□□□□ -1.8
NDC1Q9BTX1 RPS26P15-201ENST00000488067 348 ntBASIC3.82□□□□□ -1.8
NDC1Q9BTX1 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC3.82□□□□□ -1.8
NDC1Q9BTX1 AL359273.1-201ENST00000510918 627 ntBASIC3.82□□□□□ -1.8
NDC1Q9BTX1 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC3.82□□□□□ -1.8
NDC1Q9BTX1 AC026782.1-201ENST00000512952 449 ntBASIC3.82□□□□□ -1.8
NDC1Q9BTX1 Y_RNA.670-201ENST00000516255 105 ntBASIC3.82□□□□□ -1.8
NDC1Q9BTX1 Vault.1-201ENST00000516474 102 ntBASIC3.82□□□□□ -1.8
NDC1Q9BTX1 RNU6-914P-201ENST00000516749 109 ntBASIC3.82□□□□□ -1.8
NDC1Q9BTX1 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC3.82□□□□□ -1.8
NDC1Q9BTX1 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC3.82□□□□□ -1.8
NDC1Q9BTX1 MED28P6-201ENST00000558776 231 ntBASIC3.82□□□□□ -1.8
NDC1Q9BTX1 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC3.82□□□□□ -1.8
NDC1Q9BTX1 MIR3158-1-201ENST00000583596 81 ntBASIC3.82□□□□□ -1.8
NDC1Q9BTX1 AC012119.1-201ENST00000603184 222 ntBASIC3.82□□□□□ -1.8
NDC1Q9BTX1 AC009229.3-201ENST00000608056 282 ntBASIC3.82□□□□□ -1.8
NDC1Q9BTX1 AL355810.1-201ENST00000614629 552 ntBASIC3.82□□□□□ -1.8
NDC1Q9BTX1 AL132822.1-201ENST00000617063 513 ntBASIC3.82□□□□□ -1.8
NDC1Q9BTX1 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC3.82□□□□□ -1.8
NDC1Q9BTX1 TTK-211ENST00000627129 240 ntTSL 5 BASIC3.82□□□□□ -1.8
NDC1Q9BTX1 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.82□□□□□ -1.8
NDC1Q9BTX1 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
NDC1Q9BTX1 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC3.82□□□□□ -1.8
NDC1Q9BTX1 NOL8P1-201ENST00000508336 3529 ntBASIC3.82□□□□□ -1.8
NDC1Q9BTX1 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC3.81□□□□□ -1.8
NDC1Q9BTX1 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC3.81□□□□□ -1.8
NDC1Q9BTX1 MTND5P30-201ENST00000452896 1731 ntBASIC3.81□□□□□ -1.8
NDC1Q9BTX1 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
NDC1Q9BTX1 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
NDC1Q9BTX1 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC3.81□□□□□ -1.8
NDC1Q9BTX1 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.81□□□□□ -1.8
NDC1Q9BTX1 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC3.81□□□□□ -1.8
NDC1Q9BTX1 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
NDC1Q9BTX1 AC117470.1-201ENST00000381974 330 ntBASIC3.81□□□□□ -1.8
NDC1Q9BTX1 Y_RNA.404-201ENST00000383978 102 ntBASIC3.81□□□□□ -1.8
NDC1Q9BTX1 RNU6-45P-201ENST00000384471 107 ntBASIC3.81□□□□□ -1.8
NDC1Q9BTX1 RNU6-95P-201ENST00000384697 107 ntBASIC3.81□□□□□ -1.8
NDC1Q9BTX1 RNU6-328P-201ENST00000390887 106 ntBASIC3.81□□□□□ -1.8
NDC1Q9BTX1 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
NDC1Q9BTX1 RNU6-1050P-201ENST00000410388 107 ntBASIC3.81□□□□□ -1.8
NDC1Q9BTX1 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC3.81□□□□□ -1.8
NDC1Q9BTX1 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC3.81□□□□□ -1.8
NDC1Q9BTX1 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC3.81□□□□□ -1.8
NDC1Q9BTX1 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC3.81□□□□□ -1.8
NDC1Q9BTX1 USP9YP7-201ENST00000436723 430 ntBASIC3.81□□□□□ -1.8
NDC1Q9BTX1 USP9YP32-201ENST00000452432 430 ntBASIC3.81□□□□□ -1.8
NDC1Q9BTX1 RPL21P41-201ENST00000459863 264 ntBASIC3.81□□□□□ -1.8
NDC1Q9BTX1 RPS15AP34-201ENST00000487776 387 ntBASIC3.81□□□□□ -1.8
NDC1Q9BTX1 SNORA67.7-201ENST00000516664 135 ntBASIC3.81□□□□□ -1.8
NDC1Q9BTX1 Y_RNA.708-201ENST00000516950 96 ntBASIC3.81□□□□□ -1.8
NDC1Q9BTX1 RNU1-54P-201ENST00000517181 120 ntBASIC3.81□□□□□ -1.8
NDC1Q9BTX1 AC009902.1-201ENST00000519351 183 ntBASIC3.81□□□□□ -1.8
NDC1Q9BTX1 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC3.81□□□□□ -1.8
NDC1Q9BTX1 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC3.81□□□□□ -1.8
NDC1Q9BTX1 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC3.81□□□□□ -1.8
NDC1Q9BTX1 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC3.81□□□□□ -1.8
NDC1Q9BTX1 AC026371.1-201ENST00000551867 419 ntBASIC3.81□□□□□ -1.8
NDC1Q9BTX1 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC3.81□□□□□ -1.8
NDC1Q9BTX1 MIR5692A1-201ENST00000580523 69 ntBASIC3.81□□□□□ -1.8
NDC1Q9BTX1 MIR4680-201ENST00000580906 66 ntBASIC3.81□□□□□ -1.8
NDC1Q9BTX1 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC3.81□□□□□ -1.8
NDC1Q9BTX1 DLEU2_5.1-201ENST00000615567 84 ntBASIC3.81□□□□□ -1.8
NDC1Q9BTX1 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC3.81□□□□□ -1.8
NDC1Q9BTX1 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms