Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 AC106730.3-201ENST00000624568 641 ntBASIC1.06□□□□□ -2.24
AP1S3Q96PC3 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.06□□□□□ -2.24
AP1S3Q96PC3 ZNF29P-201ENST00000225587 168 ntBASIC1.05□□□□□ -2.24
AP1S3Q96PC3 DNAH14-203ENST00000366848 929 ntTSL 1 (best) BASIC1.05□□□□□ -2.24
AP1S3Q96PC3 DEFB127-201ENST00000382388 514 ntAPPRIS P1 TSL 1 (best) BASIC1.05□□□□□ -2.24
AP1S3Q96PC3 RNU1-39P-201ENST00000383897 165 ntBASIC1.05□□□□□ -2.24
AP1S3Q96PC3 MIR150-201ENST00000385048 84 ntBASIC1.05□□□□□ -2.24
AP1S3Q96PC3 MIR504-201ENST00000385065 83 ntBASIC1.05□□□□□ -2.24
AP1S3Q96PC3 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.05□□□□□ -2.24
AP1S3Q96PC3 SNORA67.6-201ENST00000391093 99 ntBASIC1.05□□□□□ -2.24
AP1S3Q96PC3 AC092634.6-201ENST00000418558 192 ntBASIC1.05□□□□□ -2.24
AP1S3Q96PC3 AL590233.1-201ENST00000430017 456 ntBASIC1.05□□□□□ -2.24
AP1S3Q96PC3 AC015922.2-201ENST00000435593 184 ntBASIC1.05□□□□□ -2.24
AP1S3Q96PC3 AC007677.1-201ENST00000445757 515 ntBASIC1.05□□□□□ -2.24
AP1S3Q96PC3 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC1.05□□□□□ -2.24
AP1S3Q96PC3 RPS29P21-201ENST00000496272 170 ntBASIC1.05□□□□□ -2.24
AP1S3Q96PC3 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC1.05□□□□□ -2.24
AP1S3Q96PC3 SNORA44.1-201ENST00000517031 108 ntBASIC1.05□□□□□ -2.24
AP1S3Q96PC3 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC1.05□□□□□ -2.24
AP1S3Q96PC3 AP003497.1-201ENST00000528472 562 ntBASIC1.05□□□□□ -2.24
AP1S3Q96PC3 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC1.05□□□□□ -2.24
AP1S3Q96PC3 AC006199.1-201ENST00000548728 219 ntBASIC1.05□□□□□ -2.24
AP1S3Q96PC3 NACAP3-201ENST00000552100 481 ntBASIC1.05□□□□□ -2.24
AP1S3Q96PC3 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC1.05□□□□□ -2.24
AP1S3Q96PC3 AC021739.1-201ENST00000559631 174 ntBASIC1.05□□□□□ -2.24
AP1S3Q96PC3 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC1.05□□□□□ -2.24
AP1S3Q96PC3 AC093519.1-201ENST00000566109 298 ntBASIC1.05□□□□□ -2.24
AP1S3Q96PC3 AC026271.5-201ENST00000577873 130 ntBASIC1.05□□□□□ -2.24
AP1S3Q96PC3 BNIP3P23-201ENST00000599655 511 ntBASIC1.05□□□□□ -2.24
AP1S3Q96PC3 MTCYBP22-201ENST00000603788 447 ntBASIC1.05□□□□□ -2.24
AP1S3Q96PC3 AC004853.1-201ENST00000604902 698 ntBASIC1.05□□□□□ -2.24
AP1S3Q96PC3 RMST_10.1-201ENST00000616309 154 ntBASIC1.05□□□□□ -2.24
AP1S3Q96PC3 AC108479.2-201ENST00000617314 601 ntBASIC1.05□□□□□ -2.24
AP1S3Q96PC3 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC1.05□□□□□ -2.24
AP1S3Q96PC3 AC005539.1-201ENST00000443768 1479 ntBASIC1.05□□□□□ -2.24
AP1S3Q96PC3 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.05□□□□□ -2.24
AP1S3Q96PC3 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.04□□□□□ -2.24
AP1S3Q96PC3 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.04□□□□□ -2.24
AP1S3Q96PC3 MIR634-201ENST00000385208 97 ntBASIC1.04□□□□□ -2.24
AP1S3Q96PC3 MIR561-201ENST00000385216 97 ntBASIC1.04□□□□□ -2.24
AP1S3Q96PC3 SNORD65C-201ENST00000390962 71 ntBASIC1.04□□□□□ -2.24
AP1S3Q96PC3 AL591034.2-201ENST00000402839 359 ntBASIC1.04□□□□□ -2.24
AP1S3Q96PC3 MIR1323-201ENST00000408090 73 ntBASIC1.04□□□□□ -2.24
AP1S3Q96PC3 ACAP2-IT1-201ENST00000419899 690 ntTSL 3 BASIC1.04□□□□□ -2.24
AP1S3Q96PC3 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.04□□□□□ -2.24
AP1S3Q96PC3 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC1.04□□□□□ -2.24
AP1S3Q96PC3 UBE2V1P4-201ENST00000425374 344 ntBASIC1.04□□□□□ -2.24
AP1S3Q96PC3 AL354695.1-201ENST00000427935 228 ntBASIC1.04□□□□□ -2.24
AP1S3Q96PC3 SNRPGP13-201ENST00000442212 177 ntBASIC1.04□□□□□ -2.24
AP1S3Q96PC3 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC1.04□□□□□ -2.24
AP1S3Q96PC3 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC1.04□□□□□ -2.24
AP1S3Q96PC3 AL137159.1-201ENST00000452808 512 ntBASIC1.04□□□□□ -2.24
AP1S3Q96PC3 SUMO2P2-201ENST00000456482 255 ntBASIC1.04□□□□□ -2.24
AP1S3Q96PC3 UBE2DNL-203ENST00000474922 222 ntBASIC1.04□□□□□ -2.24
AP1S3Q96PC3 AC018437.1-201ENST00000492214 406 ntBASIC1.04□□□□□ -2.24
AP1S3Q96PC3 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC1.04□□□□□ -2.24
AP1S3Q96PC3 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC1.04□□□□□ -2.24
AP1S3Q96PC3 SNORA25.11-201ENST00000515935 105 ntBASIC1.04□□□□□ -2.24
AP1S3Q96PC3 RNU6-528P-201ENST00000516926 100 ntBASIC1.04□□□□□ -2.24
AP1S3Q96PC3 RNA5SP135-201ENST00000517019 125 ntBASIC1.04□□□□□ -2.24
AP1S3Q96PC3 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC1.04□□□□□ -2.24
AP1S3Q96PC3 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC1.04□□□□□ -2.24
AP1S3Q96PC3 AC021549.1-201ENST00000580937 433 ntTSL 3 BASIC1.04□□□□□ -2.24
AP1S3Q96PC3 BNIP3P24-201ENST00000593398 557 ntBASIC1.04□□□□□ -2.24
AP1S3Q96PC3 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC1.04□□□□□ -2.24
AP1S3Q96PC3 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC1.04□□□□□ -2.24
AP1S3Q96PC3 MIR6845-201ENST00000613182 61 ntBASIC1.04□□□□□ -2.24
AP1S3Q96PC3 MIR1264-201ENST00000616374 69 ntBASIC1.04□□□□□ -2.24
AP1S3Q96PC3 DLEU1_1.1-201ENST00000618107 190 ntBASIC1.04□□□□□ -2.24
AP1S3Q96PC3 AC006213.5-201ENST00000619673 288 ntBASIC1.04□□□□□ -2.24
AP1S3Q96PC3 AC004009.2-201ENST00000623016 728 ntBASIC1.04□□□□□ -2.24
AP1S3Q96PC3 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC1.04□□□□□ -2.24
AP1S3Q96PC3 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC1.03□□□□□ -2.24
AP1S3Q96PC3 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC1.03□□□□□ -2.24
AP1S3Q96PC3 RNA5SP465-201ENST00000391195 109 ntBASIC1.03□□□□□ -2.24
AP1S3Q96PC3 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC1.03□□□□□ -2.24
AP1S3Q96PC3 AL358453.1-201ENST00000422522 250 ntBASIC1.03□□□□□ -2.24
AP1S3Q96PC3 AC019178.2-201ENST00000423595 505 ntBASIC1.03□□□□□ -2.24
AP1S3Q96PC3 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC1.03□□□□□ -2.24
AP1S3Q96PC3 HMGN2P3-201ENST00000433603 273 ntBASIC1.03□□□□□ -2.24
AP1S3Q96PC3 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC1.03□□□□□ -2.24
AP1S3Q96PC3 HMGN2P5-201ENST00000436882 273 ntBASIC1.03□□□□□ -2.24
AP1S3Q96PC3 RNA5SP57-201ENST00000459463 123 ntBASIC1.03□□□□□ -2.24
AP1S3Q96PC3 AC008379.1-201ENST00000463655 464 ntBASIC1.03□□□□□ -2.24
AP1S3Q96PC3 RPL31P58-201ENST00000469001 379 ntBASIC1.03□□□□□ -2.24
AP1S3Q96PC3 CKS1BP2-201ENST00000497342 240 ntBASIC1.03□□□□□ -2.24
AP1S3Q96PC3 MTCYBP35-201ENST00000503630 1137 ntBASIC1.03□□□□□ -2.24
AP1S3Q96PC3 AC098799.1-201ENST00000504752 800 ntBASIC1.03□□□□□ -2.24
AP1S3Q96PC3 AC091544.4-201ENST00000555268 342 ntBASIC1.03□□□□□ -2.24
AP1S3Q96PC3 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC1.03□□□□□ -2.24
AP1S3Q96PC3 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.03□□□□□ -2.24
AP1S3Q96PC3 MIR3167-201ENST00000579623 85 ntBASIC1.03□□□□□ -2.24
AP1S3Q96PC3 AL713866.2-201ENST00000603579 219 ntBASIC1.03□□□□□ -2.24
AP1S3Q96PC3 AC006338.1-201ENST00000618453 749 ntBASIC1.03□□□□□ -2.24
AP1S3Q96PC3 U6.101-201ENST00000637707 76 ntBASIC1.03□□□□□ -2.24
AP1S3Q96PC3 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.03□□□□□ -2.24
AP1S3Q96PC3 Z75746.1-201ENST00000440243 2080 ntBASIC1.03□□□□□ -2.25
AP1S3Q96PC3 SNORA70B-201ENST00000384210 135 ntBASIC1.02□□□□□ -2.25
AP1S3Q96PC3 MIR758-201ENST00000390227 88 ntBASIC1.02□□□□□ -2.25
AP1S3Q96PC3 U8.13-201ENST00000390842 128 ntBASIC1.02□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 114.3 ms