Protein–RNA interactions for Protein: Q96NR3

PTCHD1, Patched domain-containing protein 1, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1Q96NR3 AL732292.1-201ENST00000426692 226 ntBASIC4.18□□□□□ -1.74
PTCHD1Q96NR3 AL513043.1-201ENST00000439124 535 ntBASIC4.18□□□□□ -1.74
PTCHD1Q96NR3 FABP5P15-201ENST00000453566 214 ntBASIC4.18□□□□□ -1.74
PTCHD1Q96NR3 RPL9P9-202ENST00000466501 579 ntBASIC4.18□□□□□ -1.74
PTCHD1Q96NR3 RPS20P22-201ENST00000473700 357 ntBASIC4.18□□□□□ -1.74
PTCHD1Q96NR3 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC4.18□□□□□ -1.74
PTCHD1Q96NR3 AC093840.1-201ENST00000511599 336 ntBASIC4.18□□□□□ -1.74
PTCHD1Q96NR3 RNU6-388P-201ENST00000517012 105 ntBASIC4.18□□□□□ -1.74
PTCHD1Q96NR3 RNU6-389P-201ENST00000517048 105 ntBASIC4.18□□□□□ -1.74
PTCHD1Q96NR3 AP005902.1-201ENST00000521358 186 ntBASIC4.18□□□□□ -1.74
PTCHD1Q96NR3 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC4.18□□□□□ -1.74
PTCHD1Q96NR3 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
PTCHD1Q96NR3 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC4.18□□□□□ -1.74
PTCHD1Q96NR3 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC4.18□□□□□ -1.74
PTCHD1Q96NR3 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC4.18□□□□□ -1.74
PTCHD1Q96NR3 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC4.18□□□□□ -1.74
PTCHD1Q96NR3 AC006600.1-201ENST00000572529 153 ntBASIC4.18□□□□□ -1.74
PTCHD1Q96NR3 MIR3921-201ENST00000577308 85 ntBASIC4.18□□□□□ -1.74
PTCHD1Q96NR3 TEX41-280ENST00000629185 591 ntTSL 5 BASIC4.18□□□□□ -1.74
PTCHD1Q96NR3 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
PTCHD1Q96NR3 NOL8P1-201ENST00000508336 3529 ntBASIC4.18□□□□□ -1.74
PTCHD1Q96NR3 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC4.18□□□□□ -1.74
PTCHD1Q96NR3 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.17□□□□□ -1.74
PTCHD1Q96NR3 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC4.17□□□□□ -1.74
PTCHD1Q96NR3 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC4.17□□□□□ -1.74
PTCHD1Q96NR3 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
PTCHD1Q96NR3 RNA5SP151-201ENST00000365632 117 ntBASIC4.17□□□□□ -1.74
PTCHD1Q96NR3 Y_RNA.489-201ENST00000384410 101 ntBASIC4.17□□□□□ -1.74
PTCHD1Q96NR3 MIR625-201ENST00000385047 85 ntBASIC4.17□□□□□ -1.74
PTCHD1Q96NR3 RNA5SP146-201ENST00000410743 123 ntBASIC4.17□□□□□ -1.74
PTCHD1Q96NR3 RPS20P14-201ENST00000412545 360 ntBASIC4.17□□□□□ -1.74
PTCHD1Q96NR3 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC4.17□□□□□ -1.74
PTCHD1Q96NR3 Z85995.1-201ENST00000415547 335 ntBASIC4.17□□□□□ -1.74
PTCHD1Q96NR3 EI24P1-201ENST00000416584 867 ntBASIC4.17□□□□□ -1.74
PTCHD1Q96NR3 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC4.17□□□□□ -1.74
PTCHD1Q96NR3 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC4.17□□□□□ -1.74
PTCHD1Q96NR3 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC4.17□□□□□ -1.74
PTCHD1Q96NR3 MYL8P-204ENST00000431574 518 ntBASIC4.17□□□□□ -1.74
PTCHD1Q96NR3 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC4.17□□□□□ -1.74
PTCHD1Q96NR3 RPS3AP12-201ENST00000443616 753 ntBASIC4.17□□□□□ -1.74
PTCHD1Q96NR3 AC073910.1-201ENST00000445047 438 ntBASIC4.17□□□□□ -1.74
PTCHD1Q96NR3 MTCO3P8-201ENST00000453691 755 ntBASIC4.17□□□□□ -1.74
PTCHD1Q96NR3 RPL23AP24-201ENST00000458203 385 ntBASIC4.17□□□□□ -1.74
PTCHD1Q96NR3 AC133134.1-201ENST00000466800 359 ntBASIC4.17□□□□□ -1.74
PTCHD1Q96NR3 AL160314.1-201ENST00000490836 438 ntBASIC4.17□□□□□ -1.74
PTCHD1Q96NR3 AL359273.1-201ENST00000510918 627 ntBASIC4.17□□□□□ -1.74
PTCHD1Q96NR3 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC4.17□□□□□ -1.74
PTCHD1Q96NR3 RNU6-1256P-201ENST00000516539 103 ntBASIC4.17□□□□□ -1.74
PTCHD1Q96NR3 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC4.17□□□□□ -1.74
PTCHD1Q96NR3 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC4.17□□□□□ -1.74
PTCHD1Q96NR3 MED28P6-201ENST00000558776 231 ntBASIC4.17□□□□□ -1.74
PTCHD1Q96NR3 ATP5J2P6-201ENST00000565203 266 ntBASIC4.17□□□□□ -1.74
PTCHD1Q96NR3 AC005357.1-201ENST00000588399 301 ntBASIC4.17□□□□□ -1.74
PTCHD1Q96NR3 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC4.17□□□□□ -1.74
PTCHD1Q96NR3 SNRPGP15-201ENST00000600149 222 ntBASIC4.17□□□□□ -1.74
PTCHD1Q96NR3 AL158827.2-201ENST00000602494 330 ntBASIC4.17□□□□□ -1.74
PTCHD1Q96NR3 AP000787.2-201ENST00000604432 568 ntBASIC4.17□□□□□ -1.74
PTCHD1Q96NR3 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC4.17□□□□□ -1.74
PTCHD1Q96NR3 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC4.17□□□□□ -1.74
PTCHD1Q96NR3 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC4.17□□□□□ -1.74
PTCHD1Q96NR3 AL691447.3-201ENST00000635020 330 ntBASIC4.17□□□□□ -1.74
PTCHD1Q96NR3 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC4.17□□□□□ -1.74
PTCHD1Q96NR3 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC4.16□□□□□ -1.74
PTCHD1Q96NR3 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC4.16□□□□□ -1.74
PTCHD1Q96NR3 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
PTCHD1Q96NR3 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC4.16□□□□□ -1.74
PTCHD1Q96NR3 Y_RNA.245-201ENST00000364493 95 ntBASIC4.16□□□□□ -1.74
PTCHD1Q96NR3 Y_RNA.288-201ENST00000364854 92 ntBASIC4.16□□□□□ -1.74
PTCHD1Q96NR3 Y_RNA.533-201ENST00000384596 114 ntBASIC4.16□□□□□ -1.74
PTCHD1Q96NR3 MIR3065-201ENST00000390137 79 ntBASIC4.16□□□□□ -1.74
PTCHD1Q96NR3 SNORD56-201ENST00000413522 71 ntBASIC4.16□□□□□ -1.74
PTCHD1Q96NR3 RPL18P10-201ENST00000425606 538 ntBASIC4.16□□□□□ -1.74
PTCHD1Q96NR3 AC092573.2-201ENST00000434546 243 ntBASIC4.16□□□□□ -1.74
PTCHD1Q96NR3 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC4.16□□□□□ -1.74
PTCHD1Q96NR3 PHBP16-201ENST00000446318 950 ntBASIC4.16□□□□□ -1.74
PTCHD1Q96NR3 OR2AQ1P-201ENST00000451972 200 ntBASIC4.16□□□□□ -1.74
PTCHD1Q96NR3 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC4.16□□□□□ -1.74
PTCHD1Q96NR3 RNU7-169P-201ENST00000459456 61 ntBASIC4.16□□□□□ -1.74
PTCHD1Q96NR3 AC011276.1-201ENST00000469688 323 ntBASIC4.16□□□□□ -1.74
PTCHD1Q96NR3 RN7SL810P-201ENST00000493031 276 ntBASIC4.16□□□□□ -1.74
PTCHD1Q96NR3 AC108022.1-201ENST00000493466 478 ntBASIC4.16□□□□□ -1.74
PTCHD1Q96NR3 HMGB1P22-201ENST00000505315 124 ntBASIC4.16□□□□□ -1.74
PTCHD1Q96NR3 OR51K1P-201ENST00000510214 950 ntBASIC4.16□□□□□ -1.74
PTCHD1Q96NR3 NDUFB4P9-201ENST00000511646 388 ntBASIC4.16□□□□□ -1.74
PTCHD1Q96NR3 ATP5F1P5-201ENST00000526403 760 ntBASIC4.16□□□□□ -1.74
PTCHD1Q96NR3 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC4.16□□□□□ -1.74
PTCHD1Q96NR3 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC4.16□□□□□ -1.74
PTCHD1Q96NR3 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC4.16□□□□□ -1.74
PTCHD1Q96NR3 VN1R91P-201ENST00000594377 169 ntBASIC4.16□□□□□ -1.74
PTCHD1Q96NR3 AC009314.1-201ENST00000603871 304 ntBASIC4.16□□□□□ -1.74
PTCHD1Q96NR3 AC091979.2-201ENST00000607514 214 ntBASIC4.16□□□□□ -1.74
PTCHD1Q96NR3 MIR1244-1-201ENST00000612829 85 ntBASIC4.16□□□□□ -1.74
PTCHD1Q96NR3 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC4.16□□□□□ -1.74
PTCHD1Q96NR3 AC140113.4-201ENST00000622087 222 ntBASIC4.16□□□□□ -1.74
PTCHD1Q96NR3 AC138627.2-201ENST00000624202 601 ntBASIC4.16□□□□□ -1.74
PTCHD1Q96NR3 MIR1244-3-201ENST00000635744 85 ntBASIC4.16□□□□□ -1.74
PTCHD1Q96NR3 MIR1244-2-201ENST00000636449 85 ntBASIC4.16□□□□□ -1.74
PTCHD1Q96NR3 MIR1244-4-202ENST00000636813 85 ntBASIC4.16□□□□□ -1.74
PTCHD1Q96NR3 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.16□□□□□ -1.74
PTCHD1Q96NR3 AC116096.1-201ENST00000566804 2314 ntBASIC4.16□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 128.3 ms