Protein–RNA interactions for Protein: Q96JI7

SPG11, Spatacsin, humanhuman

Predictions only

Length 2,443 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11Q96JI7 RPS27P26-201ENST00000494583 239 ntBASIC0.51□□□□□ -2.33
SPG11Q96JI7 AC008739.2-201ENST00000597006 317 ntBASIC0.51□□□□□ -2.33
SPG11Q96JI7 CLIC4P2-201ENST00000601934 717 ntBASIC0.51□□□□□ -2.33
SPG11Q96JI7 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC0.51□□□□□ -2.33
SPG11Q96JI7 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC0.51□□□□□ -2.33
SPG11Q96JI7 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC0.51□□□□□ -2.33
SPG11Q96JI7 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC0.51□□□□□ -2.33
SPG11Q96JI7 RNA5SP252-201ENST00000391131 119 ntBASIC0.5□□□□□ -2.33
SPG11Q96JI7 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC0.5□□□□□ -2.33
SPG11Q96JI7 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC0.5□□□□□ -2.33
SPG11Q96JI7 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC0.5□□□□□ -2.33
SPG11Q96JI7 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC0.5□□□□□ -2.33
SPG11Q96JI7 CYP4A27P-201ENST00000567218 190 ntBASIC0.5□□□□□ -2.33
SPG11Q96JI7 AC136932.1-201ENST00000574771 208 ntBASIC0.5□□□□□ -2.33
SPG11Q96JI7 AC024060.1-201ENST00000607052 494 ntBASIC0.5□□□□□ -2.33
SPG11Q96JI7 AL356473.1-201ENST00000406203 1408 ntBASIC0.5□□□□□ -2.33
SPG11Q96JI7 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC0.5□□□□□ -2.33
SPG11Q96JI7 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC0.5□□□□□ -2.33
SPG11Q96JI7 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.5□□□□□ -2.33
SPG11Q96JI7 Y_RNA.413-201ENST00000384007 102 ntBASIC0.5□□□□□ -2.33
SPG11Q96JI7 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC0.5□□□□□ -2.33
SPG11Q96JI7 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC0.5□□□□□ -2.33
SPG11Q96JI7 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC0.5□□□□□ -2.33
SPG11Q96JI7 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC0.5□□□□□ -2.33
SPG11Q96JI7 AC078857.1-201ENST00000469870 667 ntBASIC0.5□□□□□ -2.33
SPG11Q96JI7 Y_RNA.754-201ENST00000476024 102 ntBASIC0.5□□□□□ -2.33
SPG11Q96JI7 HMGB1P38-201ENST00000490557 577 ntBASIC0.5□□□□□ -2.33
SPG11Q96JI7 CFAP44-AS1-202ENST00000498480 686 ntTSL 3 BASIC0.5□□□□□ -2.33
SPG11Q96JI7 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC0.5□□□□□ -2.33
SPG11Q96JI7 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC0.5□□□□□ -2.33
SPG11Q96JI7 NDUFS5P6-201ENST00000529136 295 ntBASIC0.5□□□□□ -2.33
SPG11Q96JI7 AP003327.1-201ENST00000529684 127 ntBASIC0.5□□□□□ -2.33
SPG11Q96JI7 LINC00933-203ENST00000559812 219 ntBASIC0.5□□□□□ -2.33
SPG11Q96JI7 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC0.5□□□□□ -2.33
SPG11Q96JI7 Y_RNA.790-201ENST00000614282 102 ntBASIC0.5□□□□□ -2.33
SPG11Q96JI7 Y_RNA.782-201ENST00000614695 102 ntBASIC0.5□□□□□ -2.33
SPG11Q96JI7 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC0.5□□□□□ -2.33
SPG11Q96JI7 MIR126-201ENST00000362291 85 ntBASIC0.49□□□□□ -2.33
SPG11Q96JI7 RNU6-1164P-201ENST00000364428 107 ntBASIC0.49□□□□□ -2.33
SPG11Q96JI7 MIR627-201ENST00000384979 97 ntBASIC0.49□□□□□ -2.33
SPG11Q96JI7 RNA5SP57-201ENST00000459463 123 ntBASIC0.49□□□□□ -2.33
SPG11Q96JI7 AC010683.1-201ENST00000473673 378 ntBASIC0.49□□□□□ -2.33
SPG11Q96JI7 RPL30P5-201ENST00000494923 336 ntBASIC0.49□□□□□ -2.33
SPG11Q96JI7 AC084033.1-201ENST00000550830 633 ntBASIC0.49□□□□□ -2.33
SPG11Q96JI7 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC0.49□□□□□ -2.33
SPG11Q96JI7 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC0.49□□□□□ -2.33
SPG11Q96JI7 SDR42E1P2-201ENST00000614861 481 ntBASIC0.49□□□□□ -2.33
SPG11Q96JI7 AL138880.2-201ENST00000616214 239 ntBASIC0.49□□□□□ -2.33
SPG11Q96JI7 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC0.49□□□□□ -2.33
SPG11Q96JI7 SDR42E1P4-201ENST00000620894 481 ntBASIC0.49□□□□□ -2.33
SPG11Q96JI7 CCT4P2-201ENST00000233836 1548 ntBASIC0.49□□□□□ -2.33
SPG11Q96JI7 HMGB1P17-201ENST00000403495 628 ntBASIC0.49□□□□□ -2.33
SPG11Q96JI7 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.49□□□□□ -2.33
SPG11Q96JI7 AC096649.2-201ENST00000416186 393 ntBASIC0.49□□□□□ -2.33
SPG11Q96JI7 TOMM22P2-201ENST00000430735 237 ntBASIC0.49□□□□□ -2.33
SPG11Q96JI7 TH2LCRR-202ENST00000435042 472 ntTSL 5 BASIC0.49□□□□□ -2.33
SPG11Q96JI7 SNRPEP7-201ENST00000438350 220 ntBASIC0.49□□□□□ -2.33
SPG11Q96JI7 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC0.49□□□□□ -2.33
SPG11Q96JI7 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC0.49□□□□□ -2.33
SPG11Q96JI7 KLRA1P-201ENST00000503499 986 ntBASIC0.49□□□□□ -2.33
SPG11Q96JI7 AC091435.1-201ENST00000505442 584 ntBASIC0.49□□□□□ -2.33
SPG11Q96JI7 RNU1-61P-201ENST00000516107 151 ntBASIC0.49□□□□□ -2.33
SPG11Q96JI7 RNU6-496P-201ENST00000516145 99 ntBASIC0.49□□□□□ -2.33
SPG11Q96JI7 RNU4-77P-201ENST00000516692 156 ntBASIC0.49□□□□□ -2.33
SPG11Q96JI7 RNA5SP468-201ENST00000516782 93 ntBASIC0.49□□□□□ -2.33
SPG11Q96JI7 AC025857.1-201ENST00000525252 377 ntBASIC0.49□□□□□ -2.33
SPG11Q96JI7 MIR3690-201ENST00000580266 75 ntBASIC0.49□□□□□ -2.33
SPG11Q96JI7 AC087045.1-201ENST00000605856 382 ntBASIC0.49□□□□□ -2.33
SPG11Q96JI7 AL355802.3-201ENST00000607571 545 ntBASIC0.49□□□□□ -2.33
SPG11Q96JI7 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC0.49□□□□□ -2.33
SPG11Q96JI7 DUSP12P1-201ENST00000612874 516 ntBASIC0.49□□□□□ -2.33
SPG11Q96JI7 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC0.49□□□□□ -2.33
SPG11Q96JI7 SDAD1P2-201ENST00000441308 2028 ntBASIC0.49□□□□□ -2.33
SPG11Q96JI7 Y_RNA.100-201ENST00000363141 102 ntBASIC0.48□□□□□ -2.33
SPG11Q96JI7 U8.14-201ENST00000390843 143 ntBASIC0.48□□□□□ -2.33
SPG11Q96JI7 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC0.48□□□□□ -2.33
SPG11Q96JI7 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC0.48□□□□□ -2.33
SPG11Q96JI7 AC005741.1-201ENST00000511094 432 ntBASIC0.48□□□□□ -2.33
SPG11Q96JI7 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC0.48□□□□□ -2.33
SPG11Q96JI7 VN1R81P-201ENST00000602085 372 ntBASIC0.48□□□□□ -2.33
SPG11Q96JI7 AL139344.1-201ENST00000605228 195 ntBASIC0.48□□□□□ -2.33
SPG11Q96JI7 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC0.48□□□□□ -2.33
SPG11Q96JI7 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC0.48□□□□□ -2.33
SPG11Q96JI7 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC0.48□□□□□ -2.33
SPG11Q96JI7 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC0.48□□□□□ -2.33
SPG11Q96JI7 SNORD118-201ENST00000363593 134 ntBASIC0.48□□□□□ -2.33
SPG11Q96JI7 SNORA22-201ENST00000383907 134 ntBASIC0.48□□□□□ -2.33
SPG11Q96JI7 RNU6-452P-201ENST00000384406 107 ntBASIC0.48□□□□□ -2.33
SPG11Q96JI7 SNORA22C-201ENST00000384614 134 ntBASIC0.48□□□□□ -2.33
SPG11Q96JI7 RNU6-1072P-201ENST00000384703 107 ntBASIC0.48□□□□□ -2.33
SPG11Q96JI7 RNU6-443P-201ENST00000384780 107 ntBASIC0.48□□□□□ -2.33
SPG11Q96JI7 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC0.48□□□□□ -2.33
SPG11Q96JI7 TMEM167AP1-201ENST00000423409 219 ntBASIC0.48□□□□□ -2.33
SPG11Q96JI7 MTND5P15-201ENST00000434246 349 ntBASIC0.48□□□□□ -2.33
SPG11Q96JI7 CBX3P3-201ENST00000508108 532 ntBASIC0.48□□□□□ -2.33
SPG11Q96JI7 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC0.48□□□□□ -2.33
SPG11Q96JI7 AC022690.1-201ENST00000526681 550 ntBASIC0.48□□□□□ -2.33
SPG11Q96JI7 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC0.48□□□□□ -2.33
SPG11Q96JI7 AC067838.1-201ENST00000606064 577 ntBASIC0.48□□□□□ -2.33
SPG11Q96JI7 AC107214.2-201ENST00000608204 634 ntBASIC0.48□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 105.7 ms