Protein–RNA interactions for Protein: Q96GC9

VMP1, Vacuole membrane protein 1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1Q96GC9 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC2.77□□□□□ -1.97
VMP1Q96GC9 AC093106.2-201ENST00000428212 385 ntBASIC2.77□□□□□ -1.97
VMP1Q96GC9 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
VMP1Q96GC9 AL591704.1-201ENST00000432574 275 ntBASIC2.77□□□□□ -1.97
VMP1Q96GC9 AC004383.1-201ENST00000438135 289 ntBASIC2.77□□□□□ -1.97
VMP1Q96GC9 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC2.77□□□□□ -1.97
VMP1Q96GC9 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC2.77□□□□□ -1.97
VMP1Q96GC9 RPL22P13-201ENST00000493291 347 ntBASIC2.77□□□□□ -1.97
VMP1Q96GC9 AC083906.5-201ENST00000503722 328 ntBASIC2.77□□□□□ -1.97
VMP1Q96GC9 AC116655.1-201ENST00000508324 901 ntBASIC2.77□□□□□ -1.97
VMP1Q96GC9 MEPE-206ENST00000511670 550 ntTSL 4 BASIC2.77□□□□□ -1.97
VMP1Q96GC9 AF131216.2-201ENST00000512316 564 ntBASIC2.77□□□□□ -1.97
VMP1Q96GC9 RNU6-415P-201ENST00000516252 97 ntBASIC2.77□□□□□ -1.97
VMP1Q96GC9 CYCSP39-201ENST00000565821 309 ntBASIC2.77□□□□□ -1.97
VMP1Q96GC9 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC2.77□□□□□ -1.97
VMP1Q96GC9 AC234772.3-201ENST00000602277 528 ntBASIC2.77□□□□□ -1.97
VMP1Q96GC9 MTCYBP22-201ENST00000603788 447 ntBASIC2.77□□□□□ -1.97
VMP1Q96GC9 AC007938.3-201ENST00000604965 623 ntBASIC2.77□□□□□ -1.97
VMP1Q96GC9 AC245884.12-201ENST00000615364 59 ntBASIC2.77□□□□□ -1.97
VMP1Q96GC9 ZNF271P-202ENST00000465539 1970 ntBASIC2.77□□□□□ -1.97
VMP1Q96GC9 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
VMP1Q96GC9 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC2.77□□□□□ -1.97
VMP1Q96GC9 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
VMP1Q96GC9 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
VMP1Q96GC9 AL035425.3-201ENST00000564206 4996 ntBASIC2.77□□□□□ -1.97
VMP1Q96GC9 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC2.76□□□□□ -1.97
VMP1Q96GC9 Z98749.2-208ENST00000381646 500 ntBASIC2.76□□□□□ -1.97
VMP1Q96GC9 SNORA44-201ENST00000384584 132 ntBASIC2.76□□□□□ -1.97
VMP1Q96GC9 Y_RNA.534-201ENST00000384599 112 ntBASIC2.76□□□□□ -1.97
VMP1Q96GC9 RNU6-748P-201ENST00000384648 107 ntBASIC2.76□□□□□ -1.97
VMP1Q96GC9 MIR23A-201ENST00000385245 73 ntBASIC2.76□□□□□ -1.97
VMP1Q96GC9 NDUFB4P4-201ENST00000404822 243 ntBASIC2.76□□□□□ -1.97
VMP1Q96GC9 CYCSP48-201ENST00000417124 323 ntBASIC2.76□□□□□ -1.97
VMP1Q96GC9 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.76□□□□□ -1.97
VMP1Q96GC9 AL365184.2-201ENST00000431139 435 ntBASIC2.76□□□□□ -1.97
VMP1Q96GC9 AC236972.1-201ENST00000433225 199 ntBASIC2.76□□□□□ -1.97
VMP1Q96GC9 AL512286.1-201ENST00000439244 400 ntBASIC2.76□□□□□ -1.97
VMP1Q96GC9 MTND1P12-201ENST00000455231 147 ntBASIC2.76□□□□□ -1.97
VMP1Q96GC9 AC027673.1-201ENST00000456245 405 ntBASIC2.76□□□□□ -1.97
VMP1Q96GC9 RN7SL297P-201ENST00000483161 293 ntBASIC2.76□□□□□ -1.97
VMP1Q96GC9 RPS3AP14-201ENST00000483907 780 ntBASIC2.76□□□□□ -1.97
VMP1Q96GC9 LAMTOR3P2-201ENST00000504479 232 ntBASIC2.76□□□□□ -1.97
VMP1Q96GC9 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC2.76□□□□□ -1.97
VMP1Q96GC9 RNU6-914P-201ENST00000516749 109 ntBASIC2.76□□□□□ -1.97
VMP1Q96GC9 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC2.76□□□□□ -1.97
VMP1Q96GC9 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
VMP1Q96GC9 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC2.76□□□□□ -1.97
VMP1Q96GC9 AC105245.1-201ENST00000581934 244 ntBASIC2.76□□□□□ -1.97
VMP1Q96GC9 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC2.76□□□□□ -1.97
VMP1Q96GC9 AC130324.3-201ENST00000614165 542 ntBASIC2.76□□□□□ -1.97
VMP1Q96GC9 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
VMP1Q96GC9 AC007318.2-201ENST00000620999 243 ntBASIC2.76□□□□□ -1.97
VMP1Q96GC9 AC025048.6-202ENST00000627667 438 ntBASIC2.76□□□□□ -1.97
VMP1Q96GC9 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.76□□□□□ -1.97
VMP1Q96GC9 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.76□□□□□ -1.97
VMP1Q96GC9 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
VMP1Q96GC9 CDC27P3-201ENST00000635418 1910 ntBASIC2.76□□□□□ -1.97
VMP1Q96GC9 RNU6-500P-201ENST00000362349 107 ntBASIC2.75□□□□□ -1.97
VMP1Q96GC9 SNORA9.2-201ENST00000365361 133 ntBASIC2.75□□□□□ -1.97
VMP1Q96GC9 SNORA4.3-201ENST00000365564 137 ntBASIC2.75□□□□□ -1.97
VMP1Q96GC9 RNU6-946P-201ENST00000383878 107 ntBASIC2.75□□□□□ -1.97
VMP1Q96GC9 EEF1A1P41-201ENST00000414667 207 ntBASIC2.75□□□□□ -1.97
VMP1Q96GC9 RPS3AP44-201ENST00000425466 790 ntBASIC2.75□□□□□ -1.97
VMP1Q96GC9 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC2.75□□□□□ -1.97
VMP1Q96GC9 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC2.75□□□□□ -1.97
VMP1Q96GC9 AL008629.1-201ENST00000438615 184 ntBASIC2.75□□□□□ -1.97
VMP1Q96GC9 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC2.75□□□□□ -1.97
VMP1Q96GC9 AP000705.1-201ENST00000454567 350 ntBASIC2.75□□□□□ -1.97
VMP1Q96GC9 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC2.75□□□□□ -1.97
VMP1Q96GC9 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC2.75□□□□□ -1.97
VMP1Q96GC9 AC068587.2-201ENST00000478386 781 ntBASIC2.75□□□□□ -1.97
VMP1Q96GC9 AC080014.1-201ENST00000496877 1201 ntBASIC2.75□□□□□ -1.97
VMP1Q96GC9 HMGB3P3-201ENST00000510526 400 ntBASIC2.75□□□□□ -1.97
VMP1Q96GC9 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC2.75□□□□□ -1.97
VMP1Q96GC9 SCGB1D5P-201ENST00000515134 247 ntBASIC2.75□□□□□ -1.97
VMP1Q96GC9 RN7SKP265-201ENST00000516448 223 ntBASIC2.75□□□□□ -1.97
VMP1Q96GC9 SNORA31.19-201ENST00000517079 126 ntBASIC2.75□□□□□ -1.97
VMP1Q96GC9 AP005902.1-201ENST00000521358 186 ntBASIC2.75□□□□□ -1.97
VMP1Q96GC9 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC2.75□□□□□ -1.97
VMP1Q96GC9 ELOCP31-201ENST00000540463 467 ntBASIC2.75□□□□□ -1.97
VMP1Q96GC9 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC2.75□□□□□ -1.97
VMP1Q96GC9 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC2.75□□□□□ -1.97
VMP1Q96GC9 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC2.75□□□□□ -1.97
VMP1Q96GC9 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC2.75□□□□□ -1.97
VMP1Q96GC9 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC2.75□□□□□ -1.97
VMP1Q96GC9 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
VMP1Q96GC9 RPS15AP11-201ENST00000594193 385 ntBASIC2.75□□□□□ -1.97
VMP1Q96GC9 AL359999.1-201ENST00000604513 294 ntBASIC2.75□□□□□ -1.97
VMP1Q96GC9 AC034229.4-201ENST00000607861 441 ntBASIC2.75□□□□□ -1.97
VMP1Q96GC9 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC2.75□□□□□ -1.97
VMP1Q96GC9 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC2.75□□□□□ -1.97
VMP1Q96GC9 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
VMP1Q96GC9 AC096644.4-201ENST00000563417 2912 ntBASIC2.74□□□□□ -1.97
VMP1Q96GC9 RNA5SP125-201ENST00000364843 120 ntBASIC2.74□□□□□ -1.97
VMP1Q96GC9 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC2.74□□□□□ -1.97
VMP1Q96GC9 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC2.74□□□□□ -1.97
VMP1Q96GC9 RPS15AP9-201ENST00000439856 381 ntBASIC2.74□□□□□ -1.97
VMP1Q96GC9 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC2.74□□□□□ -1.97
VMP1Q96GC9 AL590365.1-201ENST00000450788 243 ntBASIC2.74□□□□□ -1.97
VMP1Q96GC9 BTF3P15-201ENST00000455606 336 ntBASIC2.74□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 119.4 ms