Protein–RNA interactions for Protein: Q96DI7

SNRNP40, U5 small nuclear ribonucleoprotein 40 kDa protein, humanhuman

Known RBP Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40Q96DI7 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC2.7□□□□□ -1.98
SNRNP40Q96DI7 AC007182.2-201ENST00000489251 402 ntBASIC2.7□□□□□ -1.98
SNRNP40Q96DI7 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2.7□□□□□ -1.98
SNRNP40Q96DI7 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC2.7□□□□□ -1.98
SNRNP40Q96DI7 AP003122.4-201ENST00000530980 758 ntBASIC2.7□□□□□ -1.98
SNRNP40Q96DI7 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
SNRNP40Q96DI7 TRAV37-201ENST00000553906 342 ntBASIC2.7□□□□□ -1.98
SNRNP40Q96DI7 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC2.7□□□□□ -1.98
SNRNP40Q96DI7 AC007151.1-201ENST00000572774 483 ntBASIC2.7□□□□□ -1.98
SNRNP40Q96DI7 AC137800.2-201ENST00000574375 120 ntBASIC2.7□□□□□ -1.98
SNRNP40Q96DI7 MIR3167-201ENST00000579623 85 ntBASIC2.7□□□□□ -1.98
SNRNP40Q96DI7 MIR4435-1-201ENST00000582552 80 ntBASIC2.7□□□□□ -1.98
SNRNP40Q96DI7 Z99497.2-201ENST00000603634 310 ntBASIC2.7□□□□□ -1.98
SNRNP40Q96DI7 AL158032.1-201ENST00000605401 106 ntBASIC2.7□□□□□ -1.98
SNRNP40Q96DI7 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC2.7□□□□□ -1.98
SNRNP40Q96DI7 AC110994.2-201ENST00000635481 492 ntBASIC2.7□□□□□ -1.98
SNRNP40Q96DI7 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
SNRNP40Q96DI7 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC2.7□□□□□ -1.98
SNRNP40Q96DI7 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC2.69□□□□□ -1.98
SNRNP40Q96DI7 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
SNRNP40Q96DI7 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC2.69□□□□□ -1.98
SNRNP40Q96DI7 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
SNRNP40Q96DI7 SNORA20.2-201ENST00000383922 131 ntBASIC2.69□□□□□ -1.98
SNRNP40Q96DI7 RNU6-641P-201ENST00000384006 107 ntBASIC2.69□□□□□ -1.98
SNRNP40Q96DI7 SNORA40.3-201ENST00000390964 122 ntBASIC2.69□□□□□ -1.98
SNRNP40Q96DI7 AL139095.1-201ENST00000404326 391 ntBASIC2.69□□□□□ -1.98
SNRNP40Q96DI7 AC080125.1-201ENST00000414888 684 ntBASIC2.69□□□□□ -1.98
SNRNP40Q96DI7 NPM1P11-201ENST00000417106 855 ntBASIC2.69□□□□□ -1.98
SNRNP40Q96DI7 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC2.69□□□□□ -1.98
SNRNP40Q96DI7 AC090960.1-201ENST00000421072 306 ntBASIC2.69□□□□□ -1.98
SNRNP40Q96DI7 AC063976.3-201ENST00000426849 329 ntBASIC2.69□□□□□ -1.98
SNRNP40Q96DI7 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC2.69□□□□□ -1.98
SNRNP40Q96DI7 RPS20P5-201ENST00000434808 360 ntBASIC2.69□□□□□ -1.98
SNRNP40Q96DI7 OSTCP8-201ENST00000445117 448 ntBASIC2.69□□□□□ -1.98
SNRNP40Q96DI7 AC233279.1-201ENST00000455300 423 ntBASIC2.69□□□□□ -1.98
SNRNP40Q96DI7 AC026801.1-201ENST00000497178 464 ntBASIC2.69□□□□□ -1.98
SNRNP40Q96DI7 Y_RNA.689-201ENST00000516589 107 ntBASIC2.69□□□□□ -1.98
SNRNP40Q96DI7 SNORA64.4-201ENST00000516632 81 ntBASIC2.69□□□□□ -1.98
SNRNP40Q96DI7 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC2.69□□□□□ -1.98
SNRNP40Q96DI7 ZDHHC20P3-201ENST00000531576 336 ntBASIC2.69□□□□□ -1.98
SNRNP40Q96DI7 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC2.69□□□□□ -1.98
SNRNP40Q96DI7 CYCSP39-201ENST00000565821 309 ntBASIC2.69□□□□□ -1.98
SNRNP40Q96DI7 MIR4782-201ENST00000577987 79 ntBASIC2.69□□□□□ -1.98
SNRNP40Q96DI7 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC2.69□□□□□ -1.98
SNRNP40Q96DI7 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC2.69□□□□□ -1.98
SNRNP40Q96DI7 UBE2Q2P2-203ENST00000613592 761 ntBASIC2.69□□□□□ -1.98
SNRNP40Q96DI7 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC2.69□□□□□ -1.98
SNRNP40Q96DI7 MIR7515-201ENST00000637837 67 ntBASIC2.69□□□□□ -1.98
SNRNP40Q96DI7 AC099654.13-201ENST00000639774 207 ntBASIC2.69□□□□□ -1.98
SNRNP40Q96DI7 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC2.69□□□□□ -1.98
SNRNP40Q96DI7 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.69□□□□□ -1.98
SNRNP40Q96DI7 AC004972.1-201ENST00000623934 2209 ntBASIC2.69□□□□□ -1.98
SNRNP40Q96DI7 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC2.69□□□□□ -1.98
SNRNP40Q96DI7 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC2.68□□□□□ -1.98
SNRNP40Q96DI7 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
SNRNP40Q96DI7 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC2.68□□□□□ -1.98
SNRNP40Q96DI7 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
SNRNP40Q96DI7 RNA5SP383-201ENST00000362934 120 ntBASIC2.68□□□□□ -1.98
SNRNP40Q96DI7 RPS3AP36-201ENST00000398190 775 ntBASIC2.68□□□□□ -1.98
SNRNP40Q96DI7 RPS3AP3-201ENST00000411933 242 ntBASIC2.68□□□□□ -1.98
SNRNP40Q96DI7 HMGN1P14-201ENST00000412459 517 ntBASIC2.68□□□□□ -1.98
SNRNP40Q96DI7 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC2.68□□□□□ -1.98
SNRNP40Q96DI7 AC087499.2-201ENST00000432861 149 ntBASIC2.68□□□□□ -1.98
SNRNP40Q96DI7 RPL23AP22-201ENST00000437556 453 ntBASIC2.68□□□□□ -1.98
SNRNP40Q96DI7 MTND6P13-201ENST00000443510 523 ntBASIC2.68□□□□□ -1.98
SNRNP40Q96DI7 AL033528.1-201ENST00000453780 140 ntBASIC2.68□□□□□ -1.98
SNRNP40Q96DI7 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC2.68□□□□□ -1.98
SNRNP40Q96DI7 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC2.68□□□□□ -1.98
SNRNP40Q96DI7 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC2.68□□□□□ -1.98
SNRNP40Q96DI7 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC2.68□□□□□ -1.98
SNRNP40Q96DI7 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC2.68□□□□□ -1.98
SNRNP40Q96DI7 AC022447.1-201ENST00000515358 464 ntBASIC2.68□□□□□ -1.98
SNRNP40Q96DI7 SNORA31.18-201ENST00000517043 134 ntBASIC2.68□□□□□ -1.98
SNRNP40Q96DI7 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC2.68□□□□□ -1.98
SNRNP40Q96DI7 AC068657.1-201ENST00000520807 306 ntBASIC2.68□□□□□ -1.98
SNRNP40Q96DI7 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.68□□□□□ -1.98
SNRNP40Q96DI7 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC2.68□□□□□ -1.98
SNRNP40Q96DI7 AP002453.2-201ENST00000533503 320 ntBASIC2.68□□□□□ -1.98
SNRNP40Q96DI7 AC107016.2-201ENST00000547968 190 ntBASIC2.68□□□□□ -1.98
SNRNP40Q96DI7 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC2.68□□□□□ -1.98
SNRNP40Q96DI7 AC021739.1-201ENST00000559631 174 ntBASIC2.68□□□□□ -1.98
SNRNP40Q96DI7 AC005771.1-201ENST00000585581 349 ntBASIC2.68□□□□□ -1.98
SNRNP40Q96DI7 AC073544.2-201ENST00000601155 540 ntBASIC2.68□□□□□ -1.98
SNRNP40Q96DI7 AL161734.1-201ENST00000609720 557 ntBASIC2.68□□□□□ -1.98
SNRNP40Q96DI7 AK9-203ENST00000368948 2478 ntTSL 5 BASIC2.68□□□□□ -1.98
SNRNP40Q96DI7 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC2.68□□□□□ -1.98
SNRNP40Q96DI7 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC2.67□□□□□ -1.98
SNRNP40Q96DI7 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC2.67□□□□□ -1.98
SNRNP40Q96DI7 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC2.67□□□□□ -1.98
SNRNP40Q96DI7 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
SNRNP40Q96DI7 AL356057.2-201ENST00000403318 432 ntBASIC2.67□□□□□ -1.98
SNRNP40Q96DI7 RNU6ATAC16P-201ENST00000408591 138 ntBASIC2.67□□□□□ -1.98
SNRNP40Q96DI7 RNU2-39P-201ENST00000410604 198 ntBASIC2.67□□□□□ -1.98
SNRNP40Q96DI7 AC092809.3-201ENST00000415453 231 ntBASIC2.67□□□□□ -1.98
SNRNP40Q96DI7 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC2.67□□□□□ -1.98
SNRNP40Q96DI7 AC007560.1-201ENST00000426912 237 ntBASIC2.67□□□□□ -1.98
SNRNP40Q96DI7 COX6CP2-201ENST00000444980 225 ntBASIC2.67□□□□□ -1.98
SNRNP40Q96DI7 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC2.67□□□□□ -1.98
SNRNP40Q96DI7 GZMAP1-201ENST00000503054 631 ntBASIC2.67□□□□□ -1.98
SNRNP40Q96DI7 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC2.67□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms