Protein–RNA interactions for Protein: Q96AY4

TTC28, Tetratricopeptide repeat protein 28, humanhuman

Predictions only

Length 2,481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28Q96AY4 MIR4802-201ENST00000581881 80 ntBASIC0.84□□□□□ -2.28
TTC28Q96AY4 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC0.84□□□□□ -2.28
TTC28Q96AY4 AC140725.3-201ENST00000616193 880 ntBASIC0.84□□□□□ -2.28
TTC28Q96AY4 uc_338.22-201ENST00000622722 187 ntBASIC0.84□□□□□ -2.28
TTC28Q96AY4 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC0.84□□□□□ -2.28
TTC28Q96AY4 AL513185.3-201ENST00000433335 1300 ntBASIC0.84□□□□□ -2.28
TTC28Q96AY4 RNY4P24-201ENST00000362735 96 ntBASIC0.83□□□□□ -2.28
TTC28Q96AY4 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC0.83□□□□□ -2.28
TTC28Q96AY4 RNA5SP266-201ENST00000410273 108 ntBASIC0.83□□□□□ -2.28
TTC28Q96AY4 ARL2BPP3-201ENST00000421226 480 ntBASIC0.83□□□□□ -2.28
TTC28Q96AY4 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC0.83□□□□□ -2.28
TTC28Q96AY4 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC0.83□□□□□ -2.28
TTC28Q96AY4 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC0.83□□□□□ -2.28
TTC28Q96AY4 RNU6-491P-201ENST00000516099 110 ntBASIC0.83□□□□□ -2.28
TTC28Q96AY4 OR4R1P-201ENST00000529879 463 ntBASIC0.83□□□□□ -2.28
TTC28Q96AY4 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC0.83□□□□□ -2.28
TTC28Q96AY4 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC0.83□□□□□ -2.28
TTC28Q96AY4 AP000811.1-201ENST00000603803 651 ntBASIC0.83□□□□□ -2.28
TTC28Q96AY4 AC022387.2-201ENST00000604050 448 ntBASIC0.83□□□□□ -2.28
TTC28Q96AY4 Pinc.1-201ENST00000616452 154 ntBASIC0.83□□□□□ -2.28
TTC28Q96AY4 AL360181.4-201ENST00000621752 134 ntBASIC0.83□□□□□ -2.28
TTC28Q96AY4 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC0.83□□□□□ -2.28
TTC28Q96AY4 OR5H6-203ENST00000642105 978 ntBASIC0.83□□□□□ -2.28
TTC28Q96AY4 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC0.83□□□□□ -2.28
TTC28Q96AY4 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC0.83□□□□□ -2.28
TTC28Q96AY4 OR4G2P-201ENST00000328113 903 ntBASIC0.83□□□□□ -2.28
TTC28Q96AY4 RNU1-105P-201ENST00000363470 161 ntBASIC0.83□□□□□ -2.28
TTC28Q96AY4 Y_RNA.170-201ENST00000363746 110 ntBASIC0.83□□□□□ -2.28
TTC28Q96AY4 MIR1303-201ENST00000408625 86 ntBASIC0.83□□□□□ -2.28
TTC28Q96AY4 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC0.83□□□□□ -2.28
TTC28Q96AY4 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC0.83□□□□□ -2.28
TTC28Q96AY4 AC074117.2-201ENST00000417130 397 ntBASIC0.83□□□□□ -2.28
TTC28Q96AY4 DSCR4-IT1-201ENST00000417138 424 ntTSL 5 BASIC0.83□□□□□ -2.28
TTC28Q96AY4 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC0.83□□□□□ -2.28
TTC28Q96AY4 GPM6BP3-201ENST00000442797 145 ntBASIC0.83□□□□□ -2.28
TTC28Q96AY4 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC0.83□□□□□ -2.28
TTC28Q96AY4 SNRPGP12-201ENST00000449481 213 ntBASIC0.83□□□□□ -2.28
TTC28Q96AY4 RPL7P18-201ENST00000478965 734 ntBASIC0.83□□□□□ -2.28
TTC28Q96AY4 PCNAP1-201ENST00000505363 709 ntBASIC0.83□□□□□ -2.28
TTC28Q96AY4 AC025768.1-201ENST00000510057 267 ntBASIC0.83□□□□□ -2.28
TTC28Q96AY4 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC0.83□□□□□ -2.28
TTC28Q96AY4 RNU6-351P-201ENST00000516097 100 ntBASIC0.83□□□□□ -2.28
TTC28Q96AY4 RNA5SP134-201ENST00000516492 96 ntBASIC0.83□□□□□ -2.28
TTC28Q96AY4 PTK2-220ENST00000520151 573 ntTSL 4 BASIC0.83□□□□□ -2.28
TTC28Q96AY4 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC0.83□□□□□ -2.28
TTC28Q96AY4 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC0.83□□□□□ -2.28
TTC28Q96AY4 MIR3609-201ENST00000582661 80 ntBASIC0.83□□□□□ -2.28
TTC28Q96AY4 MIR7974-201ENST00000615835 79 ntBASIC0.83□□□□□ -2.28
TTC28Q96AY4 MIR7515-201ENST00000637837 67 ntBASIC0.83□□□□□ -2.28
TTC28Q96AY4 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC0.82□□□□□ -2.28
TTC28Q96AY4 RNU6-730P-201ENST00000383954 104 ntBASIC0.82□□□□□ -2.28
TTC28Q96AY4 Y_RNA.413-201ENST00000384007 102 ntBASIC0.82□□□□□ -2.28
TTC28Q96AY4 AC092745.2-202ENST00000411880 369 ntBASIC0.82□□□□□ -2.28
TTC28Q96AY4 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC0.82□□□□□ -2.28
TTC28Q96AY4 MED14P1-201ENST00000430517 648 ntBASIC0.82□□□□□ -2.28
TTC28Q96AY4 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC0.82□□□□□ -2.28
TTC28Q96AY4 Y_RNA.754-201ENST00000476024 102 ntBASIC0.82□□□□□ -2.28
TTC28Q96AY4 FO393415.2-201ENST00000480085 343 ntBASIC0.82□□□□□ -2.28
TTC28Q96AY4 AC104685.1-201ENST00000502445 371 ntBASIC0.82□□□□□ -2.28
TTC28Q96AY4 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC0.82□□□□□ -2.28
TTC28Q96AY4 BTF3P12-201ENST00000519620 469 ntBASIC0.82□□□□□ -2.28
TTC28Q96AY4 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC0.82□□□□□ -2.28
TTC28Q96AY4 CYCSP2-201ENST00000558168 301 ntBASIC0.82□□□□□ -2.28
TTC28Q96AY4 AC093510.2-201ENST00000562820 896 ntBASIC0.82□□□□□ -2.28
TTC28Q96AY4 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC0.82□□□□□ -2.28
TTC28Q96AY4 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC0.82□□□□□ -2.28
TTC28Q96AY4 AC104365.3-201ENST00000587011 625 ntTSL 5 BASIC0.82□□□□□ -2.28
TTC28Q96AY4 CYP2C61P-201ENST00000604072 290 ntBASIC0.82□□□□□ -2.28
TTC28Q96AY4 Y_RNA.790-201ENST00000614282 102 ntBASIC0.82□□□□□ -2.28
TTC28Q96AY4 Y_RNA.782-201ENST00000614695 102 ntBASIC0.82□□□□□ -2.28
TTC28Q96AY4 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC0.82□□□□□ -2.28
TTC28Q96AY4 RPL21P24-201ENST00000413752 448 ntBASIC0.82□□□□□ -2.28
TTC28Q96AY4 LINC00434-201ENST00000423739 419 ntTSL 3 BASIC0.82□□□□□ -2.28
TTC28Q96AY4 ISCA1P1-201ENST00000426679 387 ntBASIC0.82□□□□□ -2.28
TTC28Q96AY4 AL353764.1-201ENST00000442072 474 ntTSL 2 BASIC0.82□□□□□ -2.28
TTC28Q96AY4 RPS15AP27-201ENST00000449183 343 ntBASIC0.82□□□□□ -2.28
TTC28Q96AY4 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC0.82□□□□□ -2.28
TTC28Q96AY4 AC022493.1-201ENST00000492984 337 ntBASIC0.82□□□□□ -2.28
TTC28Q96AY4 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC0.82□□□□□ -2.28
TTC28Q96AY4 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC0.82□□□□□ -2.28
TTC28Q96AY4 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC0.82□□□□□ -2.28
TTC28Q96AY4 MIR3921-201ENST00000577308 85 ntBASIC0.82□□□□□ -2.28
TTC28Q96AY4 MIR4658-201ENST00000584344 65 ntBASIC0.82□□□□□ -2.28
TTC28Q96AY4 UCA1.1-201ENST00000620952 75 ntBASIC0.82□□□□□ -2.28
TTC28Q96AY4 MIR203B-201ENST00000636080 86 ntBASIC0.82□□□□□ -2.28
TTC28Q96AY4 AL596211.1-201ENST00000569873 2277 ntBASIC0.81□□□□□ -2.28
TTC28Q96AY4 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC0.81□□□□□ -2.28
TTC28Q96AY4 SNORD114-3-201ENST00000364969 75 ntBASIC0.81□□□□□ -2.28
TTC28Q96AY4 MIR17-201ENST00000385012 84 ntBASIC0.81□□□□□ -2.28
TTC28Q96AY4 MIR513A1-201ENST00000385138 129 ntBASIC0.81□□□□□ -2.28
TTC28Q96AY4 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC0.81□□□□□ -2.28
TTC28Q96AY4 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC0.81□□□□□ -2.28
TTC28Q96AY4 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC0.81□□□□□ -2.28
TTC28Q96AY4 AL135752.1-201ENST00000479477 471 ntBASIC0.81□□□□□ -2.28
TTC28Q96AY4 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC0.81□□□□□ -2.28
TTC28Q96AY4 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC0.81□□□□□ -2.28
TTC28Q96AY4 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC0.81□□□□□ -2.28
TTC28Q96AY4 RNA5SP67-201ENST00000516422 131 ntBASIC0.81□□□□□ -2.28
TTC28Q96AY4 AP005902.1-201ENST00000521358 186 ntBASIC0.81□□□□□ -2.28
TTC28Q96AY4 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC0.81□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 113 ms