Protein–RNA interactions for Protein: Q92994

BRF1, Transcription factor IIIB 90 kDa subunit, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1Q92994 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
BRF1Q92994 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.52□□□□□ -1.69
BRF1Q92994 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
BRF1Q92994 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
BRF1Q92994 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
BRF1Q92994 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC4.52□□□□□ -1.69
BRF1Q92994 RNU6-490P-201ENST00000362985 107 ntBASIC4.52□□□□□ -1.69
BRF1Q92994 RNU6-266P-201ENST00000364225 107 ntBASIC4.52□□□□□ -1.69
BRF1Q92994 RNU6-1074P-201ENST00000383995 104 ntBASIC4.52□□□□□ -1.69
BRF1Q92994 RNU6-213P-201ENST00000384051 104 ntBASIC4.52□□□□□ -1.69
BRF1Q92994 Y_RNA.534-201ENST00000384599 112 ntBASIC4.52□□□□□ -1.69
BRF1Q92994 Y_RNA.605-201ENST00000410577 105 ntBASIC4.52□□□□□ -1.69
BRF1Q92994 RNU6-293P-201ENST00000411259 106 ntBASIC4.52□□□□□ -1.69
BRF1Q92994 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC4.52□□□□□ -1.69
BRF1Q92994 NOTCH2P1-201ENST00000443481 624 ntBASIC4.52□□□□□ -1.69
BRF1Q92994 AL359073.1-201ENST00000448036 403 ntBASIC4.52□□□□□ -1.69
BRF1Q92994 NUTF2P7-201ENST00000453086 375 ntBASIC4.52□□□□□ -1.69
BRF1Q92994 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC4.52□□□□□ -1.69
BRF1Q92994 BTF3P15-201ENST00000455606 336 ntBASIC4.52□□□□□ -1.69
BRF1Q92994 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC4.52□□□□□ -1.69
BRF1Q92994 AC084198.1-201ENST00000477747 402 ntBASIC4.52□□□□□ -1.69
BRF1Q92994 RAC1P2-201ENST00000511164 579 ntBASIC4.52□□□□□ -1.69
BRF1Q92994 RNU6-470P-201ENST00000515954 104 ntBASIC4.52□□□□□ -1.69
BRF1Q92994 RNU6-927P-201ENST00000516199 100 ntBASIC4.52□□□□□ -1.69
BRF1Q92994 RNU6-914P-201ENST00000516749 109 ntBASIC4.52□□□□□ -1.69
BRF1Q92994 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC4.52□□□□□ -1.69
BRF1Q92994 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC4.52□□□□□ -1.69
BRF1Q92994 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC4.52□□□□□ -1.69
BRF1Q92994 AL606490.9-201ENST00000603331 271 ntBASIC4.52□□□□□ -1.69
BRF1Q92994 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC4.52□□□□□ -1.69
BRF1Q92994 AC034102.8-201ENST00000615146 484 ntBASIC4.52□□□□□ -1.69
BRF1Q92994 AC087588.2-201ENST00000617667 426 ntBASIC4.52□□□□□ -1.69
BRF1Q92994 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC4.52□□□□□ -1.69
BRF1Q92994 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC4.52□□□□□ -1.69
BRF1Q92994 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC4.52□□□□□ -1.69
BRF1Q92994 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
BRF1Q92994 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC4.52□□□□□ -1.69
BRF1Q92994 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
BRF1Q92994 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC4.52□□□□□ -1.69
BRF1Q92994 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
BRF1Q92994 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
BRF1Q92994 ZNF807-201ENST00000328088 1707 ntBASIC4.52□□□□□ -1.69
BRF1Q92994 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
BRF1Q92994 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC4.51□□□□□ -1.69
BRF1Q92994 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.51□□□□□ -1.69
BRF1Q92994 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
BRF1Q92994 RNA5SP97-201ENST00000365006 84 ntBASIC4.51□□□□□ -1.69
BRF1Q92994 MIR568-201ENST00000385036 95 ntBASIC4.51□□□□□ -1.69
BRF1Q92994 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC4.51□□□□□ -1.69
BRF1Q92994 RPS12P23-201ENST00000419579 400 ntBASIC4.51□□□□□ -1.69
BRF1Q92994 AC244098.2-201ENST00000422068 99 ntBASIC4.51□□□□□ -1.69
BRF1Q92994 UBE2V1P4-201ENST00000425374 344 ntBASIC4.51□□□□□ -1.69
BRF1Q92994 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC4.51□□□□□ -1.69
BRF1Q92994 AC004975.1-201ENST00000428733 208 ntBASIC4.51□□□□□ -1.69
BRF1Q92994 MTCYBP9-201ENST00000431021 303 ntBASIC4.51□□□□□ -1.69
BRF1Q92994 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC4.51□□□□□ -1.69
BRF1Q92994 AC133473.1-201ENST00000455173 299 ntBASIC4.51□□□□□ -1.69
BRF1Q92994 RNU7-138P-201ENST00000459479 64 ntBASIC4.51□□□□□ -1.69
BRF1Q92994 CREM-226ENST00000469949 721 ntTSL 3 BASIC4.51□□□□□ -1.69
BRF1Q92994 AC103987.1-201ENST00000473394 348 ntBASIC4.51□□□□□ -1.69
BRF1Q92994 TRBV12-2-201ENST00000489763 344 ntBASIC4.51□□□□□ -1.69
BRF1Q92994 SRP72-202ENST00000504757 745 ntTSL 2 BASIC4.51□□□□□ -1.69
BRF1Q92994 LEF1-218ENST00000512172 598 ntTSL 2 BASIC4.51□□□□□ -1.69
BRF1Q92994 AC025423.5-201ENST00000550230 219 ntBASIC4.51□□□□□ -1.69
BRF1Q92994 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC4.51□□□□□ -1.69
BRF1Q92994 AC073539.2-201ENST00000597113 165 ntBASIC4.51□□□□□ -1.69
BRF1Q92994 AC002044.1-201ENST00000606707 158 ntBASIC4.51□□□□□ -1.69
BRF1Q92994 AL161423.1-201ENST00000613700 262 ntBASIC4.51□□□□□ -1.69
BRF1Q92994 MIR6875-201ENST00000617506 72 ntBASIC4.51□□□□□ -1.69
BRF1Q92994 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC4.51□□□□□ -1.69
BRF1Q92994 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
BRF1Q92994 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC4.51□□□□□ -1.69
BRF1Q92994 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC4.51□□□□□ -1.69
BRF1Q92994 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
BRF1Q92994 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC4.51□□□□□ -1.69
BRF1Q92994 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4.51□□□□□ -1.69
BRF1Q92994 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
BRF1Q92994 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC4.5□□□□□ -1.69
BRF1Q92994 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC4.5□□□□□ -1.69
BRF1Q92994 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
BRF1Q92994 Y_RNA.80-201ENST00000362996 102 ntBASIC4.5□□□□□ -1.69
BRF1Q92994 RNY1P14-201ENST00000384426 108 ntBASIC4.5□□□□□ -1.69
BRF1Q92994 HMGN2P8-201ENST00000391458 268 ntBASIC4.5□□□□□ -1.69
BRF1Q92994 HLFP1-201ENST00000402375 499 ntBASIC4.5□□□□□ -1.69
BRF1Q92994 HSPE1P8-201ENST00000406997 288 ntBASIC4.5□□□□□ -1.69
BRF1Q92994 RPL21P90-201ENST00000415692 466 ntBASIC4.5□□□□□ -1.69
BRF1Q92994 AL160004.2-201ENST00000432935 350 ntBASIC4.5□□□□□ -1.69
BRF1Q92994 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC4.5□□□□□ -1.69
BRF1Q92994 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC4.5□□□□□ -1.69
BRF1Q92994 SNORA71B-202ENST00000439232 272 ntBASIC4.5□□□□□ -1.69
BRF1Q92994 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
BRF1Q92994 AC087588.1-201ENST00000462203 316 ntBASIC4.5□□□□□ -1.69
BRF1Q92994 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC4.5□□□□□ -1.69
BRF1Q92994 AC092436.3-201ENST00000511788 257 ntBASIC4.5□□□□□ -1.69
BRF1Q92994 MTCO2P24-201ENST00000515611 426 ntBASIC4.5□□□□□ -1.69
BRF1Q92994 RNU6-764P-201ENST00000516396 105 ntBASIC4.5□□□□□ -1.69
BRF1Q92994 AC069113.1-201ENST00000517763 267 ntBASIC4.5□□□□□ -1.69
BRF1Q92994 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC4.5□□□□□ -1.69
BRF1Q92994 AC022695.1-201ENST00000522089 237 ntBASIC4.5□□□□□ -1.69
BRF1Q92994 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC4.5□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 95.7 ms