Protein–RNA interactions for Protein: Q92572

AP3S1, AP-3 complex subunit sigma-1, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1Q92572 RPL22P22-201ENST00000395439 379 ntBASIC1.32□□□□□ -2.2
AP3S1Q92572 MIR1283-2-201ENST00000408621 87 ntBASIC1.32□□□□□ -2.2
AP3S1Q92572 AC078974.1-201ENST00000411597 223 ntBASIC1.32□□□□□ -2.2
AP3S1Q92572 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC1.32□□□□□ -2.2
AP3S1Q92572 UBE2V1P4-201ENST00000425374 344 ntBASIC1.32□□□□□ -2.2
AP3S1Q92572 SDAD1P3-201ENST00000427380 333 ntBASIC1.32□□□□□ -2.2
AP3S1Q92572 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC1.32□□□□□ -2.2
AP3S1Q92572 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC1.32□□□□□ -2.2
AP3S1Q92572 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC1.32□□□□□ -2.2
AP3S1Q92572 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC1.32□□□□□ -2.2
AP3S1Q92572 USP9YP10-201ENST00000454868 628 ntBASIC1.32□□□□□ -2.2
AP3S1Q92572 RPS15AP17-201ENST00000470598 390 ntBASIC1.32□□□□□ -2.2
AP3S1Q92572 AC092902.1-201ENST00000486999 259 ntBASIC1.32□□□□□ -2.2
AP3S1Q92572 SNORA25.11-201ENST00000515935 105 ntBASIC1.32□□□□□ -2.2
AP3S1Q92572 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC1.32□□□□□ -2.2
AP3S1Q92572 AC087276.1-201ENST00000529659 480 ntBASIC1.32□□□□□ -2.2
AP3S1Q92572 MTCO2P15-201ENST00000532655 656 ntBASIC1.32□□□□□ -2.2
AP3S1Q92572 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC1.32□□□□□ -2.2
AP3S1Q92572 ST20-203ENST00000562759 694 ntAPPRIS P1 TSL 2 BASIC1.32□□□□□ -2.2
AP3S1Q92572 AC023825.1-201ENST00000566704 1030 ntBASIC1.32□□□□□ -2.2
AP3S1Q92572 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC1.32□□□□□ -2.2
AP3S1Q92572 AC068025.2-201ENST00000584958 419 ntTSL 5 BASIC1.32□□□□□ -2.2
AP3S1Q92572 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC1.32□□□□□ -2.2
AP3S1Q92572 AL035411.2-201ENST00000604022 421 ntBASIC1.32□□□□□ -2.2
AP3S1Q92572 AL355598.1-201ENST00000604169 202 ntBASIC1.32□□□□□ -2.2
AP3S1Q92572 PRR13P7-201ENST00000605538 430 ntBASIC1.32□□□□□ -2.2
AP3S1Q92572 AC087241.4-201ENST00000612441 480 ntBASIC1.32□□□□□ -2.2
AP3S1Q92572 AC010133.1-201ENST00000615809 842 ntBASIC1.32□□□□□ -2.2
AP3S1Q92572 AC008121.3-201ENST00000618726 433 ntBASIC1.32□□□□□ -2.2
AP3S1Q92572 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC1.32□□□□□ -2.2
AP3S1Q92572 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC1.32□□□□□ -2.2
AP3S1Q92572 AC087821.2-201ENST00000637086 450 ntBASIC1.32□□□□□ -2.2
AP3S1Q92572 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.32□□□□□ -2.2
AP3S1Q92572 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.32□□□□□ -2.2
AP3S1Q92572 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC1.32□□□□□ -2.2
AP3S1Q92572 RNU5E-1-201ENST00000362477 120 ntBASIC1.31□□□□□ -2.2
AP3S1Q92572 RNU6-1066P-201ENST00000363573 105 ntBASIC1.31□□□□□ -2.2
AP3S1Q92572 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC1.31□□□□□ -2.2
AP3S1Q92572 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC1.31□□□□□ -2.2
AP3S1Q92572 ZNF736P10Y-201ENST00000403990 1110 ntBASIC1.31□□□□□ -2.2
AP3S1Q92572 USP9YP6-201ENST00000413550 854 ntBASIC1.31□□□□□ -2.2
AP3S1Q92572 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC1.31□□□□□ -2.2
AP3S1Q92572 SLC44A3-AS1-205ENST00000424505 612 ntBASIC1.31□□□□□ -2.2
AP3S1Q92572 UBE2V2P3-201ENST00000433562 437 ntBASIC1.31□□□□□ -2.2
AP3S1Q92572 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC1.31□□□□□ -2.2
AP3S1Q92572 HSPE1P24-201ENST00000450782 238 ntBASIC1.31□□□□□ -2.2
AP3S1Q92572 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC1.31□□□□□ -2.2
AP3S1Q92572 XACT-201ENST00000468762 497 ntTSL 5 BASIC1.31□□□□□ -2.2
AP3S1Q92572 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC1.31□□□□□ -2.2
AP3S1Q92572 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC1.31□□□□□ -2.2
AP3S1Q92572 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC1.31□□□□□ -2.2
AP3S1Q92572 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC1.31□□□□□ -2.2
AP3S1Q92572 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC1.31□□□□□ -2.2
AP3S1Q92572 U1.36-201ENST00000620684 176 ntBASIC1.31□□□□□ -2.2
AP3S1Q92572 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.31□□□□□ -2.2
AP3S1Q92572 SUGT1P1-201ENST00000379514 476 ntBASIC1.3□□□□□ -2.2
AP3S1Q92572 RNU6-637P-201ENST00000384050 107 ntBASIC1.3□□□□□ -2.2
AP3S1Q92572 MIR506-201ENST00000384998 124 ntBASIC1.3□□□□□ -2.2
AP3S1Q92572 AL353621.1-201ENST00000418219 243 ntBASIC1.3□□□□□ -2.2
AP3S1Q92572 AL121882.1-201ENST00000422893 417 ntBASIC1.3□□□□□ -2.2
AP3S1Q92572 C1DP1-201ENST00000426049 402 ntBASIC1.3□□□□□ -2.2
AP3S1Q92572 Z93242.1-201ENST00000427102 353 ntBASIC1.3□□□□□ -2.2
AP3S1Q92572 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
AP3S1Q92572 AL353706.1-201ENST00000436728 494 ntBASIC1.3□□□□□ -2.2
AP3S1Q92572 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC1.3□□□□□ -2.2
AP3S1Q92572 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC1.3□□□□□ -2.2
AP3S1Q92572 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC1.3□□□□□ -2.2
AP3S1Q92572 BX322784.1-201ENST00000455793 1077 ntBASIC1.3□□□□□ -2.2
AP3S1Q92572 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC1.3□□□□□ -2.2
AP3S1Q92572 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC1.3□□□□□ -2.2
AP3S1Q92572 RNA5SP165-201ENST00000517142 115 ntBASIC1.3□□□□□ -2.2
AP3S1Q92572 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC1.3□□□□□ -2.2
AP3S1Q92572 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC1.3□□□□□ -2.2
AP3S1Q92572 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC1.3□□□□□ -2.2
AP3S1Q92572 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.3□□□□□ -2.2
AP3S1Q92572 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
AP3S1Q92572 AC006026.1-201ENST00000444025 1803 ntBASIC1.3□□□□□ -2.2
AP3S1Q92572 PAPPA-AS1-201ENST00000445861 2450 ntBASIC1.3□□□□□ -2.2
AP3S1Q92572 MTND4P23-201ENST00000447723 1363 ntBASIC1.3□□□□□ -2.2
AP3S1Q92572 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC1.29□□□□□ -2.2
AP3S1Q92572 AL591034.2-201ENST00000402839 359 ntBASIC1.29□□□□□ -2.2
AP3S1Q92572 SNORA11.1-201ENST00000408133 129 ntBASIC1.29□□□□□ -2.2
AP3S1Q92572 RN7SKP223-201ENST00000410582 62 ntBASIC1.29□□□□□ -2.2
AP3S1Q92572 RN7SKP192-201ENST00000411291 327 ntBASIC1.29□□□□□ -2.2
AP3S1Q92572 RNU6-575P-201ENST00000411326 105 ntBASIC1.29□□□□□ -2.2
AP3S1Q92572 RPL30P13-201ENST00000418873 348 ntBASIC1.29□□□□□ -2.2
AP3S1Q92572 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
AP3S1Q92572 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC1.29□□□□□ -2.2
AP3S1Q92572 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC1.29□□□□□ -2.2
AP3S1Q92572 MTND1P28-201ENST00000435623 950 ntBASIC1.29□□□□□ -2.2
AP3S1Q92572 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC1.29□□□□□ -2.2
AP3S1Q92572 HMGB1P18-201ENST00000438801 619 ntBASIC1.29□□□□□ -2.2
AP3S1Q92572 RNFT1P2-201ENST00000443064 757 ntBASIC1.29□□□□□ -2.2
AP3S1Q92572 MTCYBP11-201ENST00000447254 1109 ntBASIC1.29□□□□□ -2.2
AP3S1Q92572 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC1.29□□□□□ -2.2
AP3S1Q92572 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC1.29□□□□□ -2.2
AP3S1Q92572 FCF1P6-201ENST00000456841 595 ntBASIC1.29□□□□□ -2.2
AP3S1Q92572 AMD1P1-201ENST00000457220 922 ntBASIC1.29□□□□□ -2.2
AP3S1Q92572 AC013267.1-201ENST00000458227 267 ntBASIC1.29□□□□□ -2.2
AP3S1Q92572 RNU7-140P-201ENST00000459546 60 ntBASIC1.29□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 112.9 ms