Protein–RNA interactions for Protein: Q8WU17

RNF139, E3 ubiquitin-protein ligase RNF139, humanhuman

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF139Q8WU17 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC2.33□□□□□ -2.04
RNF139Q8WU17 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.33□□□□□ -2.04
RNF139Q8WU17 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC2.33□□□□□ -2.04
RNF139Q8WU17 AC026464.5-201ENST00000562497 722 ntBASIC2.33□□□□□ -2.04
RNF139Q8WU17 MTND1P8-201ENST00000571424 950 ntBASIC2.33□□□□□ -2.04
RNF139Q8WU17 AC060771.1-201ENST00000582031 164 ntBASIC2.33□□□□□ -2.04
RNF139Q8WU17 AC091152.3-201ENST00000604227 325 ntBASIC2.33□□□□□ -2.04
RNF139Q8WU17 AC103710.1-201ENST00000610003 901 ntBASIC2.33□□□□□ -2.04
RNF139Q8WU17 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC2.33□□□□□ -2.04
RNF139Q8WU17 AC097655.1-201ENST00000635075 318 ntBASIC2.33□□□□□ -2.04
RNF139Q8WU17 MTND5P6-201ENST00000422338 1798 ntBASIC2.33□□□□□ -2.04
RNF139Q8WU17 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
RNF139Q8WU17 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC2.32□□□□□ -2.04
RNF139Q8WU17 AL109809.4-201ENST00000603520 2185 ntBASIC2.32□□□□□ -2.04
RNF139Q8WU17 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC2.32□□□□□ -2.04
RNF139Q8WU17 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC2.32□□□□□ -2.04
RNF139Q8WU17 U8.2-201ENST00000363156 134 ntBASIC2.32□□□□□ -2.04
RNF139Q8WU17 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC2.32□□□□□ -2.04
RNF139Q8WU17 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.32□□□□□ -2.04
RNF139Q8WU17 RNA5SP270-201ENST00000411361 118 ntBASIC2.32□□□□□ -2.04
RNF139Q8WU17 USP9YP6-201ENST00000413550 854 ntBASIC2.32□□□□□ -2.04
RNF139Q8WU17 PTGES3P4-201ENST00000426243 356 ntBASIC2.32□□□□□ -2.04
RNF139Q8WU17 AC010153.1-201ENST00000432862 727 ntBASIC2.32□□□□□ -2.04
RNF139Q8WU17 USP9YP24-201ENST00000434374 697 ntBASIC2.32□□□□□ -2.04
RNF139Q8WU17 USP9YP17-201ENST00000444617 696 ntBASIC2.32□□□□□ -2.04
RNF139Q8WU17 RNU7-59P-201ENST00000459101 61 ntBASIC2.32□□□□□ -2.04
RNF139Q8WU17 HMGB1P36-201ENST00000487709 576 ntBASIC2.32□□□□□ -2.04
RNF139Q8WU17 AC108729.1-201ENST00000487812 947 ntBASIC2.32□□□□□ -2.04
RNF139Q8WU17 AC021146.8-201ENST00000507455 733 ntBASIC2.32□□□□□ -2.04
RNF139Q8WU17 AC079395.1-201ENST00000510981 262 ntBASIC2.32□□□□□ -2.04
RNF139Q8WU17 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.32□□□□□ -2.04
RNF139Q8WU17 MRPS33P3-201ENST00000513456 322 ntBASIC2.32□□□□□ -2.04
RNF139Q8WU17 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC2.32□□□□□ -2.04
RNF139Q8WU17 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC2.32□□□□□ -2.04
RNF139Q8WU17 AC118273.2-201ENST00000532092 465 ntBASIC2.32□□□□□ -2.04
RNF139Q8WU17 AP000889.2-201ENST00000532684 490 ntBASIC2.32□□□□□ -2.04
RNF139Q8WU17 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC2.32□□□□□ -2.04
RNF139Q8WU17 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC2.32□□□□□ -2.04
RNF139Q8WU17 MIR1273D-201ENST00000577266 86 ntBASIC2.32□□□□□ -2.04
RNF139Q8WU17 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC2.32□□□□□ -2.04
RNF139Q8WU17 MTCO2P2-201ENST00000591258 225 ntBASIC2.32□□□□□ -2.04
RNF139Q8WU17 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC2.32□□□□□ -2.04
RNF139Q8WU17 AL161798.1-201ENST00000604630 131 ntBASIC2.32□□□□□ -2.04
RNF139Q8WU17 AC068276.1-201ENST00000605793 379 ntBASIC2.32□□□□□ -2.04
RNF139Q8WU17 AC245297.2-201ENST00000610119 565 ntBASIC2.32□□□□□ -2.04
RNF139Q8WU17 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
RNF139Q8WU17 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC2.32□□□□□ -2.04
RNF139Q8WU17 AC024581.2-201ENST00000619986 252 ntBASIC2.32□□□□□ -2.04
RNF139Q8WU17 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC2.32□□□□□ -2.04
RNF139Q8WU17 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
RNF139Q8WU17 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC2.32□□□□□ -2.04
RNF139Q8WU17 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
RNF139Q8WU17 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.31□□□□□ -2.04
RNF139Q8WU17 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
RNF139Q8WU17 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
RNF139Q8WU17 RPL21P132-201ENST00000331267 462 ntBASIC2.31□□□□□ -2.04
RNF139Q8WU17 RNU4-92P-201ENST00000363783 136 ntBASIC2.31□□□□□ -2.04
RNF139Q8WU17 RNU6-289P-201ENST00000364093 107 ntBASIC2.31□□□□□ -2.04
RNF139Q8WU17 RNU6-853P-201ENST00000364306 107 ntBASIC2.31□□□□□ -2.04
RNF139Q8WU17 SNORA70B-201ENST00000384210 135 ntBASIC2.31□□□□□ -2.04
RNF139Q8WU17 RNU6-906P-201ENST00000384700 70 ntBASIC2.31□□□□□ -2.04
RNF139Q8WU17 SNORA11.4-201ENST00000408823 129 ntBASIC2.31□□□□□ -2.04
RNF139Q8WU17 RN7SKP192-201ENST00000411291 327 ntBASIC2.31□□□□□ -2.04
RNF139Q8WU17 AL109913.1-201ENST00000421173 514 ntBASIC2.31□□□□□ -2.04
RNF139Q8WU17 DPH3P2-201ENST00000422618 250 ntBASIC2.31□□□□□ -2.04
RNF139Q8WU17 AC093106.2-201ENST00000428212 385 ntBASIC2.31□□□□□ -2.04
RNF139Q8WU17 AL139415.2-201ENST00000431968 163 ntBASIC2.31□□□□□ -2.04
RNF139Q8WU17 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC2.31□□□□□ -2.04
RNF139Q8WU17 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
RNF139Q8WU17 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC2.31□□□□□ -2.04
RNF139Q8WU17 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC2.31□□□□□ -2.04
RNF139Q8WU17 DUXAP8-207ENST00000456786 622 ntBASIC2.31□□□□□ -2.04
RNF139Q8WU17 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC2.31□□□□□ -2.04
RNF139Q8WU17 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC2.31□□□□□ -2.04
RNF139Q8WU17 AC010631.1-201ENST00000474150 156 ntBASIC2.31□□□□□ -2.04
RNF139Q8WU17 GTF2IP9-201ENST00000502460 301 ntBASIC2.31□□□□□ -2.04
RNF139Q8WU17 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC2.31□□□□□ -2.04
RNF139Q8WU17 RNU6-703P-201ENST00000516946 107 ntBASIC2.31□□□□□ -2.04
RNF139Q8WU17 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC2.31□□□□□ -2.04
RNF139Q8WU17 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC2.31□□□□□ -2.04
RNF139Q8WU17 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.31□□□□□ -2.04
RNF139Q8WU17 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC2.31□□□□□ -2.04
RNF139Q8WU17 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC2.31□□□□□ -2.04
RNF139Q8WU17 AL133153.1-201ENST00000557756 303 ntBASIC2.31□□□□□ -2.04
RNF139Q8WU17 AL049838.1-201ENST00000563647 981 ntBASIC2.31□□□□□ -2.04
RNF139Q8WU17 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC2.31□□□□□ -2.04
RNF139Q8WU17 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2.31□□□□□ -2.04
RNF139Q8WU17 MTCYBP22-201ENST00000603788 447 ntBASIC2.31□□□□□ -2.04
RNF139Q8WU17 AC098826.3-201ENST00000603823 466 ntBASIC2.31□□□□□ -2.04
RNF139Q8WU17 AC006270.3-201ENST00000605967 1036 ntBASIC2.31□□□□□ -2.04
RNF139Q8WU17 AC009974.1-201ENST00000608881 455 ntBASIC2.31□□□□□ -2.04
RNF139Q8WU17 AC131235.4-201ENST00000609288 620 ntBASIC2.31□□□□□ -2.04
RNF139Q8WU17 AC009831.4-201ENST00000620744 325 ntBASIC2.31□□□□□ -2.04
RNF139Q8WU17 AC005858.4-201ENST00000623191 700 ntBASIC2.31□□□□□ -2.04
RNF139Q8WU17 AC244517.12-201ENST00000623581 663 ntBASIC2.31□□□□□ -2.04
RNF139Q8WU17 AL078595.3-201ENST00000623815 1166 ntBASIC2.31□□□□□ -2.04
RNF139Q8WU17 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC2.31□□□□□ -2.04
RNF139Q8WU17 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
RNF139Q8WU17 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.3□□□□□ -2.04
RNF139Q8WU17 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 115 ms