Protein–RNA interactions for Protein: Q8TD47

RPS4Y2, 40S ribosomal protein S4, Y isoform 2, humanhuman

Predictions only

Length 263 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4Y2Q8TD47 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC1.53□□□□□ -2.16
RPS4Y2Q8TD47 AC013267.1-201ENST00000458227 267 ntBASIC1.53□□□□□ -2.16
RPS4Y2Q8TD47 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC1.53□□□□□ -2.16
RPS4Y2Q8TD47 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC1.53□□□□□ -2.16
RPS4Y2Q8TD47 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC1.53□□□□□ -2.16
RPS4Y2Q8TD47 MIR892C-201ENST00000516410 77 ntBASIC1.53□□□□□ -2.16
RPS4Y2Q8TD47 RNU2-44P-201ENST00000516795 194 ntBASIC1.53□□□□□ -2.16
RPS4Y2Q8TD47 RNU6-295P-201ENST00000516901 104 ntBASIC1.53□□□□□ -2.16
RPS4Y2Q8TD47 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC1.53□□□□□ -2.16
RPS4Y2Q8TD47 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC1.53□□□□□ -2.16
RPS4Y2Q8TD47 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC1.53□□□□□ -2.16
RPS4Y2Q8TD47 AL133241.1-201ENST00000556832 487 ntBASIC1.53□□□□□ -2.16
RPS4Y2Q8TD47 AC104072.1-201ENST00000568817 668 ntBASIC1.53□□□□□ -2.16
RPS4Y2Q8TD47 DEFB122-202ENST00000569013 197 ntBASIC1.53□□□□□ -2.16
RPS4Y2Q8TD47 AC025165.5-201ENST00000602802 578 ntBASIC1.53□□□□□ -2.16
RPS4Y2Q8TD47 AC068790.3-201ENST00000602988 553 ntBASIC1.53□□□□□ -2.16
RPS4Y2Q8TD47 AC004805.2-201ENST00000605382 482 ntBASIC1.53□□□□□ -2.16
RPS4Y2Q8TD47 AC069294.1-201ENST00000608397 350 ntBASIC1.53□□□□□ -2.16
RPS4Y2Q8TD47 AC107075.1-201ENST00000613695 314 ntBASIC1.53□□□□□ -2.16
RPS4Y2Q8TD47 AP002791.1-201ENST00000623291 381 ntBASIC1.53□□□□□ -2.16
RPS4Y2Q8TD47 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC1.53□□□□□ -2.16
RPS4Y2Q8TD47 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC1.53□□□□□ -2.16
RPS4Y2Q8TD47 AL356292.1-201ENST00000283110 373 ntBASIC1.52□□□□□ -2.17
RPS4Y2Q8TD47 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
RPS4Y2Q8TD47 RNU6-114P-201ENST00000384704 105 ntBASIC1.52□□□□□ -2.17
RPS4Y2Q8TD47 RPL26P27-201ENST00000414397 437 ntBASIC1.52□□□□□ -2.17
RPS4Y2Q8TD47 USP9YP21-201ENST00000420603 432 ntBASIC1.52□□□□□ -2.17
RPS4Y2Q8TD47 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC1.52□□□□□ -2.17
RPS4Y2Q8TD47 AC093106.2-201ENST00000428212 385 ntBASIC1.52□□□□□ -2.17
RPS4Y2Q8TD47 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC1.52□□□□□ -2.17
RPS4Y2Q8TD47 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC1.52□□□□□ -2.17
RPS4Y2Q8TD47 MTND1P28-201ENST00000435623 950 ntBASIC1.52□□□□□ -2.17
RPS4Y2Q8TD47 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC1.52□□□□□ -2.17
RPS4Y2Q8TD47 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC1.52□□□□□ -2.17
RPS4Y2Q8TD47 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC1.52□□□□□ -2.17
RPS4Y2Q8TD47 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC1.52□□□□□ -2.17
RPS4Y2Q8TD47 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC1.52□□□□□ -2.17
RPS4Y2Q8TD47 HMGB3P17-201ENST00000504195 649 ntBASIC1.52□□□□□ -2.17
RPS4Y2Q8TD47 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC1.52□□□□□ -2.17
RPS4Y2Q8TD47 AC008526.1-201ENST00000509149 338 ntBASIC1.52□□□□□ -2.17
RPS4Y2Q8TD47 AC116337.1-201ENST00000509680 687 ntBASIC1.52□□□□□ -2.17
RPS4Y2Q8TD47 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC1.52□□□□□ -2.17
RPS4Y2Q8TD47 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC1.52□□□□□ -2.17
RPS4Y2Q8TD47 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC1.52□□□□□ -2.17
RPS4Y2Q8TD47 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC1.52□□□□□ -2.17
RPS4Y2Q8TD47 RNU6-927P-201ENST00000516199 100 ntBASIC1.52□□□□□ -2.17
RPS4Y2Q8TD47 RNA5SP290-201ENST00000517133 127 ntBASIC1.52□□□□□ -2.17
RPS4Y2Q8TD47 SNORA31.25-201ENST00000517242 134 ntBASIC1.52□□□□□ -2.17
RPS4Y2Q8TD47 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC1.52□□□□□ -2.17
RPS4Y2Q8TD47 CYCSP2-201ENST00000558168 301 ntBASIC1.52□□□□□ -2.17
RPS4Y2Q8TD47 AC110588.1-201ENST00000559699 137 ntBASIC1.52□□□□□ -2.17
RPS4Y2Q8TD47 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC1.52□□□□□ -2.17
RPS4Y2Q8TD47 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC1.52□□□□□ -2.17
RPS4Y2Q8TD47 AC022662.1-201ENST00000580252 331 ntBASIC1.52□□□□□ -2.17
RPS4Y2Q8TD47 AC024619.4-201ENST00000580924 316 ntBASIC1.52□□□□□ -2.17
RPS4Y2Q8TD47 AC105245.1-201ENST00000581934 244 ntBASIC1.52□□□□□ -2.17
RPS4Y2Q8TD47 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC1.52□□□□□ -2.17
RPS4Y2Q8TD47 AC005261.5-201ENST00000596280 355 ntBASIC1.52□□□□□ -2.17
RPS4Y2Q8TD47 BBIP1P1-201ENST00000602999 279 ntBASIC1.52□□□□□ -2.17
RPS4Y2Q8TD47 AL627230.6-201ENST00000611129 280 ntBASIC1.52□□□□□ -2.17
RPS4Y2Q8TD47 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC1.52□□□□□ -2.17
RPS4Y2Q8TD47 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
RPS4Y2Q8TD47 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
RPS4Y2Q8TD47 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC1.51□□□□□ -2.17
RPS4Y2Q8TD47 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC1.51□□□□□ -2.17
RPS4Y2Q8TD47 RNU6-223P-201ENST00000362830 107 ntBASIC1.51□□□□□ -2.17
RPS4Y2Q8TD47 snoZ40.1-201ENST00000364540 72 ntBASIC1.51□□□□□ -2.17
RPS4Y2Q8TD47 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
RPS4Y2Q8TD47 MTCYBP38-201ENST00000417160 1123 ntBASIC1.51□□□□□ -2.17
RPS4Y2Q8TD47 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC1.51□□□□□ -2.17
RPS4Y2Q8TD47 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC1.51□□□□□ -2.17
RPS4Y2Q8TD47 AC003989.2-201ENST00000440224 169 ntBASIC1.51□□□□□ -2.17
RPS4Y2Q8TD47 MTND5P14-201ENST00000441481 1267 ntBASIC1.51□□□□□ -2.17
RPS4Y2Q8TD47 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC1.51□□□□□ -2.17
RPS4Y2Q8TD47 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC1.51□□□□□ -2.17
RPS4Y2Q8TD47 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC1.51□□□□□ -2.17
RPS4Y2Q8TD47 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC1.51□□□□□ -2.17
RPS4Y2Q8TD47 AC079203.1-201ENST00000487972 404 ntBASIC1.51□□□□□ -2.17
RPS4Y2Q8TD47 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC1.51□□□□□ -2.17
RPS4Y2Q8TD47 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC1.51□□□□□ -2.17
RPS4Y2Q8TD47 AC026801.1-201ENST00000497178 464 ntBASIC1.51□□□□□ -2.17
RPS4Y2Q8TD47 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC1.51□□□□□ -2.17
RPS4Y2Q8TD47 AC008628.1-201ENST00000508663 265 ntBASIC1.51□□□□□ -2.17
RPS4Y2Q8TD47 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC1.51□□□□□ -2.17
RPS4Y2Q8TD47 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.51□□□□□ -2.17
RPS4Y2Q8TD47 RNU6-548P-201ENST00000517083 115 ntBASIC1.51□□□□□ -2.17
RPS4Y2Q8TD47 RNU2-19P-201ENST00000517288 84 ntBASIC1.51□□□□□ -2.17
RPS4Y2Q8TD47 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC1.51□□□□□ -2.17
RPS4Y2Q8TD47 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC1.51□□□□□ -2.17
RPS4Y2Q8TD47 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC1.51□□□□□ -2.17
RPS4Y2Q8TD47 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC1.51□□□□□ -2.17
RPS4Y2Q8TD47 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC1.51□□□□□ -2.17
RPS4Y2Q8TD47 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.51□□□□□ -2.17
RPS4Y2Q8TD47 MIR4255-201ENST00000579351 72 ntBASIC1.51□□□□□ -2.17
RPS4Y2Q8TD47 AC090897.2-201ENST00000581715 130 ntBASIC1.51□□□□□ -2.17
RPS4Y2Q8TD47 AC068025.2-201ENST00000584958 419 ntTSL 5 BASIC1.51□□□□□ -2.17
RPS4Y2Q8TD47 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC1.51□□□□□ -2.17
RPS4Y2Q8TD47 AC011494.1-201ENST00000596454 237 ntBASIC1.51□□□□□ -2.17
RPS4Y2Q8TD47 AL096840.1-201ENST00000603287 93 ntBASIC1.51□□□□□ -2.17
RPS4Y2Q8TD47 AP002802.2-201ENST00000605877 235 ntBASIC1.51□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 107.8 ms