Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 RNA5SP130-201ENST00000364431 114 ntBASIC3.82□□□□□ -1.8
SIMC1Q8NDZ2 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
SIMC1Q8NDZ2 RNU6-1106P-201ENST00000390845 107 ntBASIC3.82□□□□□ -1.8
SIMC1Q8NDZ2 AC110754.1-201ENST00000399740 601 ntBASIC3.82□□□□□ -1.8
SIMC1Q8NDZ2 AL591034.1-201ENST00000407447 340 ntBASIC3.82□□□□□ -1.8
SIMC1Q8NDZ2 SNORA3C-201ENST00000408792 125 ntBASIC3.82□□□□□ -1.8
SIMC1Q8NDZ2 RNU2-36P-201ENST00000410361 191 ntBASIC3.82□□□□□ -1.8
SIMC1Q8NDZ2 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC3.82□□□□□ -1.8
SIMC1Q8NDZ2 RPL21P24-201ENST00000413752 448 ntBASIC3.82□□□□□ -1.8
SIMC1Q8NDZ2 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC3.82□□□□□ -1.8
SIMC1Q8NDZ2 AC005019.1-201ENST00000436455 431 ntBASIC3.82□□□□□ -1.8
SIMC1Q8NDZ2 RPL23AP46-201ENST00000438548 490 ntBASIC3.82□□□□□ -1.8
SIMC1Q8NDZ2 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
SIMC1Q8NDZ2 ELOCP24-201ENST00000456370 334 ntBASIC3.82□□□□□ -1.8
SIMC1Q8NDZ2 AL135752.1-201ENST00000479477 471 ntBASIC3.82□□□□□ -1.8
SIMC1Q8NDZ2 MTCYBP40-201ENST00000509390 1135 ntBASIC3.82□□□□□ -1.8
SIMC1Q8NDZ2 AC098591.2-201ENST00000510152 315 ntBASIC3.82□□□□□ -1.8
SIMC1Q8NDZ2 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC3.82□□□□□ -1.8
SIMC1Q8NDZ2 RNU7-143P-201ENST00000516781 65 ntBASIC3.82□□□□□ -1.8
SIMC1Q8NDZ2 RNA5SP454-201ENST00000517231 127 ntBASIC3.82□□□□□ -1.8
SIMC1Q8NDZ2 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC3.82□□□□□ -1.8
SIMC1Q8NDZ2 AC090136.1-201ENST00000520009 240 ntBASIC3.82□□□□□ -1.8
SIMC1Q8NDZ2 AL137161.1-201ENST00000532231 390 ntBASIC3.82□□□□□ -1.8
SIMC1Q8NDZ2 IMMP1LP2-201ENST00000552954 492 ntBASIC3.82□□□□□ -1.8
SIMC1Q8NDZ2 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC3.82□□□□□ -1.8
SIMC1Q8NDZ2 MIR4286-201ENST00000580651 93 ntBASIC3.82□□□□□ -1.8
SIMC1Q8NDZ2 AC024619.4-201ENST00000580924 316 ntBASIC3.82□□□□□ -1.8
SIMC1Q8NDZ2 MIR3672-201ENST00000584290 82 ntBASIC3.82□□□□□ -1.8
SIMC1Q8NDZ2 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC3.82□□□□□ -1.8
SIMC1Q8NDZ2 VN1R107P-201ENST00000601784 209 ntBASIC3.82□□□□□ -1.8
SIMC1Q8NDZ2 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC3.82□□□□□ -1.8
SIMC1Q8NDZ2 AC008739.3-201ENST00000603262 127 ntBASIC3.82□□□□□ -1.8
SIMC1Q8NDZ2 SDR42E1P2-201ENST00000614861 481 ntBASIC3.82□□□□□ -1.8
SIMC1Q8NDZ2 AC087588.2-201ENST00000617667 426 ntBASIC3.82□□□□□ -1.8
SIMC1Q8NDZ2 U6.114-201ENST00000636407 96 ntBASIC3.82□□□□□ -1.8
SIMC1Q8NDZ2 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC3.82□□□□□ -1.8
SIMC1Q8NDZ2 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
SIMC1Q8NDZ2 TNPO1P3-201ENST00000436471 2662 ntBASIC3.82□□□□□ -1.8
SIMC1Q8NDZ2 PAPPA-AS1-201ENST00000445861 2450 ntBASIC3.82□□□□□ -1.8
SIMC1Q8NDZ2 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.82□□□□□ -1.8
SIMC1Q8NDZ2 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.82□□□□□ -1.8
SIMC1Q8NDZ2 MTND5P10-201ENST00000603719 1809 ntBASIC3.81□□□□□ -1.8
SIMC1Q8NDZ2 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
SIMC1Q8NDZ2 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.81□□□□□ -1.8
SIMC1Q8NDZ2 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
SIMC1Q8NDZ2 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.81□□□□□ -1.8
SIMC1Q8NDZ2 RNU6-525P-201ENST00000363685 104 ntBASIC3.81□□□□□ -1.8
SIMC1Q8NDZ2 SNORD115-7-201ENST00000365306 82 ntBASIC3.81□□□□□ -1.8
SIMC1Q8NDZ2 SNORA70.4-201ENST00000365509 134 ntBASIC3.81□□□□□ -1.8
SIMC1Q8NDZ2 AC114491.1-201ENST00000416095 246 ntBASIC3.81□□□□□ -1.8
SIMC1Q8NDZ2 RPL31P12-201ENST00000422587 358 ntBASIC3.81□□□□□ -1.8
SIMC1Q8NDZ2 SKA2P1-201ENST00000425592 390 ntBASIC3.81□□□□□ -1.8
SIMC1Q8NDZ2 AC017083.1-201ENST00000428093 483 ntBASIC3.81□□□□□ -1.8
SIMC1Q8NDZ2 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC3.81□□□□□ -1.8
SIMC1Q8NDZ2 TBCAP1-201ENST00000436520 327 ntBASIC3.81□□□□□ -1.8
SIMC1Q8NDZ2 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC3.81□□□□□ -1.8
SIMC1Q8NDZ2 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.81□□□□□ -1.8
SIMC1Q8NDZ2 AC016696.1-201ENST00000446949 318 ntBASIC3.81□□□□□ -1.8
SIMC1Q8NDZ2 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC3.81□□□□□ -1.8
SIMC1Q8NDZ2 MTCO3P10-201ENST00000455912 772 ntBASIC3.81□□□□□ -1.8
SIMC1Q8NDZ2 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC3.81□□□□□ -1.8
SIMC1Q8NDZ2 RPL30P15-201ENST00000457129 321 ntBASIC3.81□□□□□ -1.8
SIMC1Q8NDZ2 Y_RNA.653-201ENST00000459091 95 ntBASIC3.81□□□□□ -1.8
SIMC1Q8NDZ2 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC3.81□□□□□ -1.8
SIMC1Q8NDZ2 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
SIMC1Q8NDZ2 RPS27AP1-201ENST00000475545 471 ntBASIC3.81□□□□□ -1.8
SIMC1Q8NDZ2 RNU6-256P-201ENST00000516747 97 ntBASIC3.81□□□□□ -1.8
SIMC1Q8NDZ2 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.81□□□□□ -1.8
SIMC1Q8NDZ2 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC3.81□□□□□ -1.8
SIMC1Q8NDZ2 AL117187.1-201ENST00000555482 181 ntBASIC3.81□□□□□ -1.8
SIMC1Q8NDZ2 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC3.81□□□□□ -1.8
SIMC1Q8NDZ2 MIR4444-1-201ENST00000581696 74 ntBASIC3.81□□□□□ -1.8
SIMC1Q8NDZ2 MIR5690-201ENST00000583739 73 ntBASIC3.81□□□□□ -1.8
SIMC1Q8NDZ2 MIR4444-2-201ENST00000584390 74 ntBASIC3.81□□□□□ -1.8
SIMC1Q8NDZ2 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC3.81□□□□□ -1.8
SIMC1Q8NDZ2 AC104662.1-201ENST00000604448 511 ntBASIC3.81□□□□□ -1.8
SIMC1Q8NDZ2 MIR6867-201ENST00000610636 67 ntBASIC3.81□□□□□ -1.8
SIMC1Q8NDZ2 SNHG22-203ENST00000617833 660 ntBASIC3.81□□□□□ -1.8
SIMC1Q8NDZ2 MIR7702-201ENST00000621931 59 ntBASIC3.81□□□□□ -1.8
SIMC1Q8NDZ2 AC025034.2-201ENST00000623264 286 ntBASIC3.81□□□□□ -1.8
SIMC1Q8NDZ2 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC3.81□□□□□ -1.8
SIMC1Q8NDZ2 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
SIMC1Q8NDZ2 FAM35BP-202ENST00000497389 3337 ntBASIC3.81□□□□□ -1.8
SIMC1Q8NDZ2 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
SIMC1Q8NDZ2 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
SIMC1Q8NDZ2 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC3.81□□□□□ -1.8
SIMC1Q8NDZ2 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC3.8□□□□□ -1.8
SIMC1Q8NDZ2 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC3.8□□□□□ -1.8
SIMC1Q8NDZ2 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
SIMC1Q8NDZ2 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
SIMC1Q8NDZ2 Y_RNA.148-201ENST00000363557 117 ntBASIC3.8□□□□□ -1.8
SIMC1Q8NDZ2 RNU6-1284P-201ENST00000363701 100 ntBASIC3.8□□□□□ -1.8
SIMC1Q8NDZ2 RNU6-188P-201ENST00000364207 107 ntBASIC3.8□□□□□ -1.8
SIMC1Q8NDZ2 RNU5E-6P-201ENST00000365574 115 ntBASIC3.8□□□□□ -1.8
SIMC1Q8NDZ2 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
SIMC1Q8NDZ2 Y_RNA.401-201ENST00000383965 117 ntBASIC3.8□□□□□ -1.8
SIMC1Q8NDZ2 SNORA36C-201ENST00000384289 132 ntBASIC3.8□□□□□ -1.8
SIMC1Q8NDZ2 SNORA24.1-201ENST00000384401 135 ntBASIC3.8□□□□□ -1.8
SIMC1Q8NDZ2 CISD1P1-201ENST00000393907 327 ntBASIC3.8□□□□□ -1.8
SIMC1Q8NDZ2 PTMAP2-201ENST00000397627 327 ntBASIC3.8□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 129 ms