Protein–RNA interactions for Protein: Q8N9L1

ZIC4, Zinc finger protein ZIC 4, humanhuman

Predictions only

Length 334 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC4Q8N9L1 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC1.71□□□□□ -2.14
ZIC4Q8N9L1 KLF3P2-201ENST00000465138 268 ntBASIC1.71□□□□□ -2.14
ZIC4Q8N9L1 PDC-202ENST00000497198 1174 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
ZIC4Q8N9L1 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC1.71□□□□□ -2.14
ZIC4Q8N9L1 RNA5SP165-201ENST00000517142 115 ntBASIC1.71□□□□□ -2.14
ZIC4Q8N9L1 RANP3-201ENST00000530970 276 ntBASIC1.71□□□□□ -2.14
ZIC4Q8N9L1 AC093012.1-202ENST00000549403 582 ntBASIC1.71□□□□□ -2.14
ZIC4Q8N9L1 AL133241.1-201ENST00000556832 487 ntBASIC1.71□□□□□ -2.14
ZIC4Q8N9L1 AC021739.1-201ENST00000559631 174 ntBASIC1.71□□□□□ -2.14
ZIC4Q8N9L1 AL138976.2-201ENST00000563989 694 ntBASIC1.71□□□□□ -2.14
ZIC4Q8N9L1 MIR3167-201ENST00000579623 85 ntBASIC1.71□□□□□ -2.14
ZIC4Q8N9L1 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC1.71□□□□□ -2.14
ZIC4Q8N9L1 AC009318.2-201ENST00000610917 651 ntBASIC1.71□□□□□ -2.14
ZIC4Q8N9L1 DUSP12P1-201ENST00000612874 516 ntBASIC1.71□□□□□ -2.14
ZIC4Q8N9L1 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC1.71□□□□□ -2.14
ZIC4Q8N9L1 AL031601.2-202ENST00000622650 282 ntBASIC1.71□□□□□ -2.14
ZIC4Q8N9L1 AC005858.4-201ENST00000623191 700 ntBASIC1.71□□□□□ -2.14
ZIC4Q8N9L1 AC131280.1-202ENST00000624067 4211 ntBASIC1.71□□□□□ -2.14
ZIC4Q8N9L1 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.7□□□□□ -2.14
ZIC4Q8N9L1 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC1.7□□□□□ -2.14
ZIC4Q8N9L1 RNU6-486P-201ENST00000363116 107 ntBASIC1.7□□□□□ -2.14
ZIC4Q8N9L1 AL355497.1-201ENST00000406262 551 ntBASIC1.7□□□□□ -2.14
ZIC4Q8N9L1 U6atac.2-201ENST00000408644 118 ntBASIC1.7□□□□□ -2.14
ZIC4Q8N9L1 RNU2-20P-201ENST00000410425 191 ntBASIC1.7□□□□□ -2.14
ZIC4Q8N9L1 RPL21P24-201ENST00000413752 448 ntBASIC1.7□□□□□ -2.14
ZIC4Q8N9L1 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC1.7□□□□□ -2.14
ZIC4Q8N9L1 AC003685.2-201ENST00000422795 395 ntBASIC1.7□□□□□ -2.14
ZIC4Q8N9L1 RPL30P4-201ENST00000429309 333 ntBASIC1.7□□□□□ -2.14
ZIC4Q8N9L1 AC244035.1-201ENST00000430042 390 ntBASIC1.7□□□□□ -2.14
ZIC4Q8N9L1 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC1.7□□□□□ -2.14
ZIC4Q8N9L1 FABP5P14-201ENST00000437273 393 ntBASIC1.7□□□□□ -2.14
ZIC4Q8N9L1 AC124916.1-201ENST00000444020 547 ntBASIC1.7□□□□□ -2.14
ZIC4Q8N9L1 HMGN2P10-201ENST00000448085 265 ntBASIC1.7□□□□□ -2.14
ZIC4Q8N9L1 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC1.7□□□□□ -2.14
ZIC4Q8N9L1 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC1.7□□□□□ -2.14
ZIC4Q8N9L1 snoU13.15-201ENST00000459407 104 ntBASIC1.7□□□□□ -2.14
ZIC4Q8N9L1 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC1.7□□□□□ -2.14
ZIC4Q8N9L1 RPS27P21-201ENST00000486977 252 ntBASIC1.7□□□□□ -2.14
ZIC4Q8N9L1 AC034222.1-201ENST00000494052 532 ntBASIC1.7□□□□□ -2.14
ZIC4Q8N9L1 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
ZIC4Q8N9L1 MTND4P2-201ENST00000507767 1203 ntBASIC1.7□□□□□ -2.14
ZIC4Q8N9L1 RNA5SP112-201ENST00000515937 99 ntBASIC1.7□□□□□ -2.14
ZIC4Q8N9L1 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC1.7□□□□□ -2.14
ZIC4Q8N9L1 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC1.7□□□□□ -2.14
ZIC4Q8N9L1 AC023538.1-201ENST00000534576 736 ntBASIC1.7□□□□□ -2.14
ZIC4Q8N9L1 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
ZIC4Q8N9L1 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC1.7□□□□□ -2.14
ZIC4Q8N9L1 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC1.7□□□□□ -2.14
ZIC4Q8N9L1 AC060771.1-201ENST00000582031 164 ntBASIC1.7□□□□□ -2.14
ZIC4Q8N9L1 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC1.7□□□□□ -2.14
ZIC4Q8N9L1 AC107214.2-201ENST00000608204 634 ntBASIC1.7□□□□□ -2.14
ZIC4Q8N9L1 AL121652.1-201ENST00000608851 448 ntBASIC1.7□□□□□ -2.14
ZIC4Q8N9L1 AC107075.1-201ENST00000613695 314 ntBASIC1.7□□□□□ -2.14
ZIC4Q8N9L1 AL161423.1-201ENST00000613700 262 ntBASIC1.7□□□□□ -2.14
ZIC4Q8N9L1 AL359854.1-201ENST00000614203 1594 ntBASIC1.7□□□□□ -2.14
ZIC4Q8N9L1 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.7□□□□□ -2.14
ZIC4Q8N9L1 PISRT1-201ENST00000626175 531 ntBASIC1.7□□□□□ -2.14
ZIC4Q8N9L1 PCMTD1P7-201ENST00000634506 357 ntBASIC1.7□□□□□ -2.14
ZIC4Q8N9L1 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.7□□□□□ -2.14
ZIC4Q8N9L1 AL359851.1-201ENST00000569460 4997 ntBASIC1.7□□□□□ -2.14
ZIC4Q8N9L1 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC1.7□□□□□ -2.14
ZIC4Q8N9L1 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
ZIC4Q8N9L1 CENPCP1-201ENST00000533085 2578 ntBASIC1.69□□□□□ -2.14
ZIC4Q8N9L1 RNU6-853P-201ENST00000364306 107 ntBASIC1.69□□□□□ -2.14
ZIC4Q8N9L1 RNU6-621P-201ENST00000364752 109 ntBASIC1.69□□□□□ -2.14
ZIC4Q8N9L1 Y_RNA.311-201ENST00000365068 96 ntBASIC1.69□□□□□ -2.14
ZIC4Q8N9L1 RNU6-1257P-201ENST00000384625 110 ntBASIC1.69□□□□□ -2.14
ZIC4Q8N9L1 MIR147B-201ENST00000390185 80 ntBASIC1.69□□□□□ -2.14
ZIC4Q8N9L1 RN7SKP158-201ENST00000410453 326 ntBASIC1.69□□□□□ -2.14
ZIC4Q8N9L1 AL030996.1-201ENST00000411430 235 ntBASIC1.69□□□□□ -2.14
ZIC4Q8N9L1 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC1.69□□□□□ -2.14
ZIC4Q8N9L1 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC1.69□□□□□ -2.14
ZIC4Q8N9L1 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC1.69□□□□□ -2.14
ZIC4Q8N9L1 DNAJA1P2-201ENST00000421360 1197 ntBASIC1.69□□□□□ -2.14
ZIC4Q8N9L1 AL353729.1-201ENST00000425044 720 ntBASIC1.69□□□□□ -2.14
ZIC4Q8N9L1 RPS3AP44-201ENST00000425466 790 ntBASIC1.69□□□□□ -2.14
ZIC4Q8N9L1 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC1.69□□□□□ -2.14
ZIC4Q8N9L1 GPM6BP2-201ENST00000432046 144 ntBASIC1.69□□□□□ -2.14
ZIC4Q8N9L1 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC1.69□□□□□ -2.14
ZIC4Q8N9L1 AL161651.1-201ENST00000440882 223 ntBASIC1.69□□□□□ -2.14
ZIC4Q8N9L1 GPM6BP1-201ENST00000446387 144 ntBASIC1.69□□□□□ -2.14
ZIC4Q8N9L1 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC1.69□□□□□ -2.14
ZIC4Q8N9L1 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC1.69□□□□□ -2.14
ZIC4Q8N9L1 AC010631.1-201ENST00000474150 156 ntBASIC1.69□□□□□ -2.14
ZIC4Q8N9L1 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC1.69□□□□□ -2.14
ZIC4Q8N9L1 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC1.69□□□□□ -2.14
ZIC4Q8N9L1 AC093809.1-201ENST00000509155 340 ntBASIC1.69□□□□□ -2.14
ZIC4Q8N9L1 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC1.69□□□□□ -2.14
ZIC4Q8N9L1 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC1.69□□□□□ -2.14
ZIC4Q8N9L1 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC1.69□□□□□ -2.14
ZIC4Q8N9L1 AC006199.1-201ENST00000548728 219 ntBASIC1.69□□□□□ -2.14
ZIC4Q8N9L1 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC1.69□□□□□ -2.14
ZIC4Q8N9L1 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC1.69□□□□□ -2.14
ZIC4Q8N9L1 AC025165.5-201ENST00000602802 578 ntBASIC1.69□□□□□ -2.14
ZIC4Q8N9L1 RPP40P2-201ENST00000603596 712 ntBASIC1.69□□□□□ -2.14
ZIC4Q8N9L1 AC004908.2-201ENST00000609090 574 ntBASIC1.69□□□□□ -2.14
ZIC4Q8N9L1 AC011939.3-201ENST00000613686 466 ntBASIC1.69□□□□□ -2.14
ZIC4Q8N9L1 AC244517.12-201ENST00000623581 663 ntBASIC1.69□□□□□ -2.14
ZIC4Q8N9L1 RNU6-413P-201ENST00000384115 107 ntBASIC1.68□□□□□ -2.14
ZIC4Q8N9L1 RNU6-19P-201ENST00000384718 107 ntBASIC1.68□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 109.9 ms