Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 PTK2-220ENST00000520151 573 ntTSL 4 BASIC1.23□□□□□ -2.21
VPS8Q8N3P4 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.23□□□□□ -2.21
VPS8Q8N3P4 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.23□□□□□ -2.21
VPS8Q8N3P4 MIR26B-201ENST00000362251 77 ntBASIC1.23□□□□□ -2.21
VPS8Q8N3P4 RNU6-939P-201ENST00000384634 107 ntBASIC1.23□□□□□ -2.21
VPS8Q8N3P4 AL356421.1-201ENST00000403255 413 ntBASIC1.23□□□□□ -2.21
VPS8Q8N3P4 DSCR4-IT1-201ENST00000417138 424 ntTSL 5 BASIC1.23□□□□□ -2.21
VPS8Q8N3P4 MRPL35P3-201ENST00000421557 364 ntBASIC1.23□□□□□ -2.21
VPS8Q8N3P4 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC1.23□□□□□ -2.21
VPS8Q8N3P4 RPL30P5-201ENST00000494923 336 ntBASIC1.23□□□□□ -2.21
VPS8Q8N3P4 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC1.23□□□□□ -2.21
VPS8Q8N3P4 RNU6-351P-201ENST00000516097 100 ntBASIC1.23□□□□□ -2.21
VPS8Q8N3P4 AL049870.4-201ENST00000555741 486 ntBASIC1.23□□□□□ -2.21
VPS8Q8N3P4 LINC02211-204ENST00000642024 1070 ntBASIC1.23□□□□□ -2.21
VPS8Q8N3P4 RNU6-1035P-201ENST00000384477 107 ntBASIC1.22□□□□□ -2.21
VPS8Q8N3P4 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC1.22□□□□□ -2.21
VPS8Q8N3P4 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC1.22□□□□□ -2.21
VPS8Q8N3P4 HSPE1P4-201ENST00000550617 308 ntBASIC1.22□□□□□ -2.21
VPS8Q8N3P4 AL592148.2-201ENST00000612210 372 ntBASIC1.22□□□□□ -2.21
VPS8Q8N3P4 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC1.21□□□□□ -2.22
VPS8Q8N3P4 AC018630.2-201ENST00000534866 2403 ntBASIC1.21□□□□□ -2.22
VPS8Q8N3P4 MIR218-1-201ENST00000384999 110 ntBASIC1.21□□□□□ -2.22
VPS8Q8N3P4 AL589655.1-201ENST00000405398 482 ntBASIC1.21□□□□□ -2.22
VPS8Q8N3P4 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC1.21□□□□□ -2.22
VPS8Q8N3P4 HMGB1P9-201ENST00000429856 646 ntBASIC1.21□□□□□ -2.22
VPS8Q8N3P4 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC1.21□□□□□ -2.22
VPS8Q8N3P4 BNIP3P25-201ENST00000596023 559 ntBASIC1.21□□□□□ -2.22
VPS8Q8N3P4 AC012443.1-201ENST00000605605 231 ntBASIC1.21□□□□□ -2.22
VPS8Q8N3P4 AP003476.1-201ENST00000623984 516 ntBASIC1.21□□□□□ -2.22
VPS8Q8N3P4 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC1.21□□□□□ -2.22
VPS8Q8N3P4 RN7SKP61-201ENST00000410642 295 ntBASIC1.2□□□□□ -2.22
VPS8Q8N3P4 RPL30P13-201ENST00000418873 348 ntBASIC1.2□□□□□ -2.22
VPS8Q8N3P4 SFR1P2-201ENST00000421841 730 ntBASIC1.2□□□□□ -2.22
VPS8Q8N3P4 RPL36P19-201ENST00000430744 301 ntBASIC1.2□□□□□ -2.22
VPS8Q8N3P4 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC1.2□□□□□ -2.22
VPS8Q8N3P4 YWHAZP8-201ENST00000436935 731 ntBASIC1.2□□□□□ -2.22
VPS8Q8N3P4 ARL5AP3-201ENST00000439327 386 ntBASIC1.2□□□□□ -2.22
VPS8Q8N3P4 AL353764.1-201ENST00000442072 474 ntTSL 2 BASIC1.2□□□□□ -2.22
VPS8Q8N3P4 SUMO2P2-201ENST00000456482 255 ntBASIC1.2□□□□□ -2.22
VPS8Q8N3P4 SCARNA3-201ENST00000517097 143 ntBASIC1.2□□□□□ -2.22
VPS8Q8N3P4 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC1.2□□□□□ -2.22
VPS8Q8N3P4 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC1.2□□□□□ -2.22
VPS8Q8N3P4 AL731537.2-201ENST00000561565 951 ntBASIC1.2□□□□□ -2.22
VPS8Q8N3P4 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC1.2□□□□□ -2.22
VPS8Q8N3P4 AL021997.1-201ENST00000605757 193 ntBASIC1.2□□□□□ -2.22
VPS8Q8N3P4 AC093838.1-201ENST00000613014 469 ntBASIC1.2□□□□□ -2.22
VPS8Q8N3P4 AC090132.2-201ENST00000615881 347 ntBASIC1.2□□□□□ -2.22
VPS8Q8N3P4 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.19□□□□□ -2.22
VPS8Q8N3P4 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
VPS8Q8N3P4 U3.13-201ENST00000364804 214 ntBASIC1.19□□□□□ -2.22
VPS8Q8N3P4 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC1.19□□□□□ -2.22
VPS8Q8N3P4 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.19□□□□□ -2.22
VPS8Q8N3P4 AL591212.2-201ENST00000433923 257 ntBASIC1.19□□□□□ -2.22
VPS8Q8N3P4 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC1.19□□□□□ -2.22
VPS8Q8N3P4 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC1.19□□□□□ -2.22
VPS8Q8N3P4 snoU109.4-201ENST00000458953 143 ntBASIC1.19□□□□□ -2.22
VPS8Q8N3P4 SNORA44.1-201ENST00000517031 108 ntBASIC1.19□□□□□ -2.22
VPS8Q8N3P4 LY96-202ENST00000518893 430 ntTSL 3 BASIC1.19□□□□□ -2.22
VPS8Q8N3P4 MIR3198-2-201ENST00000577868 80 ntBASIC1.19□□□□□ -2.22
VPS8Q8N3P4 AL512605.2-201ENST00000592972 256 ntBASIC1.19□□□□□ -2.22
VPS8Q8N3P4 AC025588.3-201ENST00000604182 274 ntBASIC1.19□□□□□ -2.22
VPS8Q8N3P4 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC1.19□□□□□ -2.22
VPS8Q8N3P4 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC1.19□□□□□ -2.22
VPS8Q8N3P4 FRG1HP-204ENST00000617940 757 ntBASIC1.19□□□□□ -2.22
VPS8Q8N3P4 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC1.19□□□□□ -2.22
VPS8Q8N3P4 AC010889.1-201ENST00000566193 2666 ntBASIC1.18□□□□□ -2.22
VPS8Q8N3P4 MTND2P19-201ENST00000449129 1012 ntBASIC1.18□□□□□ -2.22
VPS8Q8N3P4 AC005908.1-201ENST00000468701 347 ntBASIC1.18□□□□□ -2.22
VPS8Q8N3P4 AC093767.1-201ENST00000504523 156 ntBASIC1.18□□□□□ -2.22
VPS8Q8N3P4 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC1.18□□□□□ -2.22
VPS8Q8N3P4 AC104057.1-201ENST00000515547 497 ntBASIC1.18□□□□□ -2.22
VPS8Q8N3P4 AC135279.1-201ENST00000543493 504 ntBASIC1.18□□□□□ -2.22
VPS8Q8N3P4 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC1.18□□□□□ -2.22
VPS8Q8N3P4 AC112191.3-201ENST00000604371 277 ntBASIC1.18□□□□□ -2.22
VPS8Q8N3P4 AC016925.2-201ENST00000605108 242 ntBASIC1.18□□□□□ -2.22
VPS8Q8N3P4 AP003400.5-201ENST00000624827 617 ntBASIC1.18□□□□□ -2.22
VPS8Q8N3P4 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.18□□□□□ -2.22
VPS8Q8N3P4 MIR7157-201ENST00000635801 60 ntBASIC1.18□□□□□ -2.22
VPS8Q8N3P4 ZNF29P-201ENST00000225587 168 ntBASIC1.17□□□□□ -2.22
VPS8Q8N3P4 AC009468.1-201ENST00000412800 437 ntTSL 3 BASIC1.17□□□□□ -2.22
VPS8Q8N3P4 UBE2FP1-201ENST00000416536 447 ntBASIC1.17□□□□□ -2.22
VPS8Q8N3P4 AC099548.1-201ENST00000421443 426 ntBASIC1.17□□□□□ -2.22
VPS8Q8N3P4 AC241584.1-201ENST00000438469 1241 ntBASIC1.17□□□□□ -2.22
VPS8Q8N3P4 MTND6P13-201ENST00000443510 523 ntBASIC1.17□□□□□ -2.22
VPS8Q8N3P4 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC1.17□□□□□ -2.22
VPS8Q8N3P4 AC008379.1-201ENST00000463655 464 ntBASIC1.17□□□□□ -2.22
VPS8Q8N3P4 MIR4713-201ENST00000582691 75 ntBASIC1.17□□□□□ -2.22
VPS8Q8N3P4 AC010615.3-201ENST00000597319 394 ntBASIC1.17□□□□□ -2.22
VPS8Q8N3P4 AP001485.1-201ENST00000604799 199 ntBASIC1.17□□□□□ -2.22
VPS8Q8N3P4 AC068057.2-201ENST00000624047 895 ntBASIC1.17□□□□□ -2.22
VPS8Q8N3P4 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC1.17□□□□□ -2.22
VPS8Q8N3P4 AL442644.1-201ENST00000454390 3105 ntBASIC1.16□□□□□ -2.22
VPS8Q8N3P4 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC1.16□□□□□ -2.22
VPS8Q8N3P4 HMGN2P39-201ENST00000398005 273 ntBASIC1.16□□□□□ -2.22
VPS8Q8N3P4 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC1.16□□□□□ -2.22
VPS8Q8N3P4 AC092393.1-201ENST00000439625 742 ntBASIC1.16□□□□□ -2.22
VPS8Q8N3P4 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC1.16□□□□□ -2.22
VPS8Q8N3P4 AC104164.3-201ENST00000467363 1258 ntBASIC1.16□□□□□ -2.22
VPS8Q8N3P4 AC018437.1-201ENST00000492214 406 ntBASIC1.16□□□□□ -2.22
VPS8Q8N3P4 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC1.16□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 131.4 ms