Protein–RNA interactions for Protein: Q8N205

SYNE4, Nesprin-4, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4Q8N205 AL163153.1-201ENST00000554223 283 ntBASIC4.15□□□□□ -1.75
SYNE4Q8N205 AC006270.2-201ENST00000578523 652 ntBASIC4.15□□□□□ -1.75
SYNE4Q8N205 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC4.15□□□□□ -1.75
SYNE4Q8N205 MIR4424-201ENST00000585257 86 ntBASIC4.15□□□□□ -1.75
SYNE4Q8N205 AC006557.5-201ENST00000603126 811 ntBASIC4.15□□□□□ -1.75
SYNE4Q8N205 AC136443.5-201ENST00000603741 370 ntBASIC4.15□□□□□ -1.75
SYNE4Q8N205 AC106900.2-201ENST00000604994 317 ntBASIC4.15□□□□□ -1.75
SYNE4Q8N205 RNU6ATAC35P-201ENST00000609276 444 ntBASIC4.15□□□□□ -1.75
SYNE4Q8N205 uc_338.15-201ENST00000615470 191 ntBASIC4.15□□□□□ -1.75
SYNE4Q8N205 CEP170P1-201ENST00000502249 4587 ntBASIC4.15□□□□□ -1.75
SYNE4Q8N205 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
SYNE4Q8N205 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC4.15□□□□□ -1.75
SYNE4Q8N205 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.15□□□□□ -1.75
SYNE4Q8N205 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC4.15□□□□□ -1.75
SYNE4Q8N205 AL035425.3-201ENST00000564206 4996 ntBASIC4.15□□□□□ -1.75
SYNE4Q8N205 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
SYNE4Q8N205 HSP90AA5P-201ENST00000438353 2192 ntBASIC4.14□□□□□ -1.75
SYNE4Q8N205 AC009902.3-201ENST00000606235 2172 ntBASIC4.14□□□□□ -1.75
SYNE4Q8N205 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC4.14□□□□□ -1.75
SYNE4Q8N205 AC007390.2-201ENST00000606229 3803 ntBASIC4.14□□□□□ -1.75
SYNE4Q8N205 TNPO1P3-201ENST00000436471 2662 ntBASIC4.14□□□□□ -1.75
SYNE4Q8N205 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
SYNE4Q8N205 RNU6-7-201ENST00000364784 107 ntBASIC4.14□□□□□ -1.75
SYNE4Q8N205 RNU6-8-201ENST00000365467 107 ntBASIC4.14□□□□□ -1.75
SYNE4Q8N205 SNORA22B-201ENST00000383876 138 ntBASIC4.14□□□□□ -1.75
SYNE4Q8N205 MIR558-201ENST00000384920 94 ntBASIC4.14□□□□□ -1.75
SYNE4Q8N205 MIR454-201ENST00000390180 115 ntBASIC4.14□□□□□ -1.75
SYNE4Q8N205 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
SYNE4Q8N205 RNY4P36-201ENST00000391116 96 ntBASIC4.14□□□□□ -1.75
SYNE4Q8N205 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
SYNE4Q8N205 RNU4-26P-201ENST00000410270 107 ntBASIC4.14□□□□□ -1.75
SYNE4Q8N205 NCOR1P3-201ENST00000420479 303 ntBASIC4.14□□□□□ -1.75
SYNE4Q8N205 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC4.14□□□□□ -1.75
SYNE4Q8N205 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
SYNE4Q8N205 AC108734.1-201ENST00000439549 399 ntBASIC4.14□□□□□ -1.75
SYNE4Q8N205 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC4.14□□□□□ -1.75
SYNE4Q8N205 RPL23AP33-201ENST00000442301 452 ntBASIC4.14□□□□□ -1.75
SYNE4Q8N205 RAC1P7-201ENST00000445367 377 ntBASIC4.14□□□□□ -1.75
SYNE4Q8N205 RPL29P29-201ENST00000448725 423 ntBASIC4.14□□□□□ -1.75
SYNE4Q8N205 MRPS31P2-201ENST00000451581 518 ntBASIC4.14□□□□□ -1.75
SYNE4Q8N205 AC130509.1-201ENST00000464158 433 ntBASIC4.14□□□□□ -1.75
SYNE4Q8N205 RPL7P42-201ENST00000481005 679 ntBASIC4.14□□□□□ -1.75
SYNE4Q8N205 HMGB3P15-201ENST00000507326 574 ntBASIC4.14□□□□□ -1.75
SYNE4Q8N205 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC4.14□□□□□ -1.75
SYNE4Q8N205 RGS4-209ENST00000531057 544 ntTSL 4 BASIC4.14□□□□□ -1.75
SYNE4Q8N205 APOOP3-201ENST00000536787 586 ntBASIC4.14□□□□□ -1.75
SYNE4Q8N205 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC4.14□□□□□ -1.75
SYNE4Q8N205 MIR4775-201ENST00000581168 75 ntBASIC4.14□□□□□ -1.75
SYNE4Q8N205 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC4.14□□□□□ -1.75
SYNE4Q8N205 BNIP3P25-201ENST00000596023 559 ntBASIC4.14□□□□□ -1.75
SYNE4Q8N205 DPPA3P3-201ENST00000603842 430 ntBASIC4.14□□□□□ -1.75
SYNE4Q8N205 AC016925.2-201ENST00000605108 242 ntBASIC4.14□□□□□ -1.75
SYNE4Q8N205 HNRNPDLP4-201ENST00000605144 301 ntBASIC4.14□□□□□ -1.75
SYNE4Q8N205 AC010680.4-201ENST00000605334 543 ntBASIC4.14□□□□□ -1.75
SYNE4Q8N205 AL590099.1-201ENST00000615276 138 ntBASIC4.14□□□□□ -1.75
SYNE4Q8N205 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC4.14□□□□□ -1.75
SYNE4Q8N205 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.14□□□□□ -1.75
SYNE4Q8N205 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
SYNE4Q8N205 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC4.14□□□□□ -1.75
SYNE4Q8N205 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC4.13□□□□□ -1.75
SYNE4Q8N205 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
SYNE4Q8N205 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
SYNE4Q8N205 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
SYNE4Q8N205 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC4.13□□□□□ -1.75
SYNE4Q8N205 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC4.13□□□□□ -1.75
SYNE4Q8N205 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
SYNE4Q8N205 RN7SKP44-201ENST00000363602 316 ntBASIC4.13□□□□□ -1.75
SYNE4Q8N205 RNU5A-8P-201ENST00000364102 114 ntBASIC4.13□□□□□ -1.75
SYNE4Q8N205 U3.12-201ENST00000364498 214 ntBASIC4.13□□□□□ -1.75
SYNE4Q8N205 Y_RNA.378-201ENST00000365652 113 ntBASIC4.13□□□□□ -1.75
SYNE4Q8N205 RNU6-1297P-201ENST00000384415 104 ntBASIC4.13□□□□□ -1.75
SYNE4Q8N205 SNORA44-201ENST00000384584 132 ntBASIC4.13□□□□□ -1.75
SYNE4Q8N205 AL359634.1-202ENST00000404721 284 ntBASIC4.13□□□□□ -1.75
SYNE4Q8N205 MIR548F5-201ENST00000408421 86 ntBASIC4.13□□□□□ -1.75
SYNE4Q8N205 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC4.13□□□□□ -1.75
SYNE4Q8N205 PMCHL1-202ENST00000423102 261 ntBASIC4.13□□□□□ -1.75
SYNE4Q8N205 CKS1BP5-201ENST00000434172 273 ntBASIC4.13□□□□□ -1.75
SYNE4Q8N205 RPL32P28-201ENST00000443577 397 ntBASIC4.13□□□□□ -1.75
SYNE4Q8N205 AL357552.1-201ENST00000445254 415 ntBASIC4.13□□□□□ -1.75
SYNE4Q8N205 RNU7-180P-201ENST00000459240 63 ntBASIC4.13□□□□□ -1.75
SYNE4Q8N205 AC090096.1-201ENST00000489168 390 ntBASIC4.13□□□□□ -1.75
SYNE4Q8N205 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC4.13□□□□□ -1.75
SYNE4Q8N205 KLHL2P1-201ENST00000508691 521 ntBASIC4.13□□□□□ -1.75
SYNE4Q8N205 AC017037.2-201ENST00000513850 890 ntBASIC4.13□□□□□ -1.75
SYNE4Q8N205 AC105417.1-201ENST00000514691 285 ntBASIC4.13□□□□□ -1.75
SYNE4Q8N205 RNU6-1170P-201ENST00000515974 106 ntBASIC4.13□□□□□ -1.75
SYNE4Q8N205 Y_RNA.682-201ENST00000516457 100 ntBASIC4.13□□□□□ -1.75
SYNE4Q8N205 RNU6-1137P-201ENST00000517073 99 ntBASIC4.13□□□□□ -1.75
SYNE4Q8N205 AC022080.3-201ENST00000544433 482 ntBASIC4.13□□□□□ -1.75
SYNE4Q8N205 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
SYNE4Q8N205 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC4.13□□□□□ -1.75
SYNE4Q8N205 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC4.13□□□□□ -1.75
SYNE4Q8N205 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC4.13□□□□□ -1.75
SYNE4Q8N205 RPL12P50-201ENST00000603116 116 ntBASIC4.13□□□□□ -1.75
SYNE4Q8N205 MIR7106-201ENST00000612419 65 ntBASIC4.13□□□□□ -1.75
SYNE4Q8N205 ATP5A1P2-202ENST00000616464 443 ntBASIC4.13□□□□□ -1.75
SYNE4Q8N205 AL136313.1-201ENST00000624804 202 ntBASIC4.13□□□□□ -1.75
SYNE4Q8N205 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC4.13□□□□□ -1.75
SYNE4Q8N205 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC4.13□□□□□ -1.75
SYNE4Q8N205 AL513302.2-201ENST00000562313 1842 ntBASIC4.13□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms