Protein–RNA interactions for Protein: Q8N1B4

VPS52, Vacuolar protein sorting-associated protein 52 homolog, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52Q8N1B4 MIR6852-201ENST00000621699 66 ntBASIC3.53□□□□□ -1.84
VPS52Q8N1B4 AC006386.2-201ENST00000624491 75 ntBASIC3.53□□□□□ -1.84
VPS52Q8N1B4 AC012005.1-201ENST00000624575 75 ntBASIC3.53□□□□□ -1.84
VPS52Q8N1B4 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
VPS52Q8N1B4 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.53□□□□□ -1.85
VPS52Q8N1B4 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC3.52□□□□□ -1.85
VPS52Q8N1B4 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.52□□□□□ -1.85
VPS52Q8N1B4 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
VPS52Q8N1B4 RNU6-641P-201ENST00000384006 107 ntBASIC3.52□□□□□ -1.85
VPS52Q8N1B4 RNU6-701P-201ENST00000384059 107 ntBASIC3.52□□□□□ -1.85
VPS52Q8N1B4 RNU6-483P-201ENST00000384088 108 ntBASIC3.52□□□□□ -1.85
VPS52Q8N1B4 RNU6-14P-201ENST00000384630 106 ntBASIC3.52□□□□□ -1.85
VPS52Q8N1B4 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
VPS52Q8N1B4 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.52□□□□□ -1.85
VPS52Q8N1B4 MRPL50P2-201ENST00000416821 482 ntBASIC3.52□□□□□ -1.85
VPS52Q8N1B4 COTL1P1-201ENST00000422309 375 ntBASIC3.52□□□□□ -1.85
VPS52Q8N1B4 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC3.52□□□□□ -1.85
VPS52Q8N1B4 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC3.52□□□□□ -1.85
VPS52Q8N1B4 AC091179.1-201ENST00000461606 579 ntBASIC3.52□□□□□ -1.85
VPS52Q8N1B4 RPS27P29-201ENST00000463110 252 ntBASIC3.52□□□□□ -1.85
VPS52Q8N1B4 MTCO3P38-201ENST00000468910 766 ntBASIC3.52□□□□□ -1.85
VPS52Q8N1B4 AC021205.2-201ENST00000480069 347 ntBASIC3.52□□□□□ -1.85
VPS52Q8N1B4 MTAPP1-201ENST00000489154 819 ntBASIC3.52□□□□□ -1.85
VPS52Q8N1B4 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC3.52□□□□□ -1.85
VPS52Q8N1B4 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC3.52□□□□□ -1.85
VPS52Q8N1B4 MIR4775-201ENST00000581168 75 ntBASIC3.52□□□□□ -1.85
VPS52Q8N1B4 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC3.52□□□□□ -1.85
VPS52Q8N1B4 AC174048.1-201ENST00000603389 144 ntBASIC3.52□□□□□ -1.85
VPS52Q8N1B4 AP002826.1-201ENST00000608835 315 ntBASIC3.52□□□□□ -1.85
VPS52Q8N1B4 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC3.52□□□□□ -1.85
VPS52Q8N1B4 AC007998.5-201ENST00000622938 237 ntBASIC3.52□□□□□ -1.85
VPS52Q8N1B4 AC005858.4-201ENST00000623191 700 ntBASIC3.52□□□□□ -1.85
VPS52Q8N1B4 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC3.52□□□□□ -1.85
VPS52Q8N1B4 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC3.52□□□□□ -1.85
VPS52Q8N1B4 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
VPS52Q8N1B4 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.52□□□□□ -1.85
VPS52Q8N1B4 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.52□□□□□ -1.85
VPS52Q8N1B4 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
VPS52Q8N1B4 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.51□□□□□ -1.85
VPS52Q8N1B4 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.51□□□□□ -1.85
VPS52Q8N1B4 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.51□□□□□ -1.85
VPS52Q8N1B4 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
VPS52Q8N1B4 RNU6-1090P-201ENST00000364065 94 ntBASIC3.51□□□□□ -1.85
VPS52Q8N1B4 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC3.51□□□□□ -1.85
VPS52Q8N1B4 RNU6-946P-201ENST00000383878 107 ntBASIC3.51□□□□□ -1.85
VPS52Q8N1B4 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
VPS52Q8N1B4 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.51□□□□□ -1.85
VPS52Q8N1B4 RNA5SP31-201ENST00000411144 127 ntBASIC3.51□□□□□ -1.85
VPS52Q8N1B4 AL513331.1-201ENST00000411908 397 ntBASIC3.51□□□□□ -1.85
VPS52Q8N1B4 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
VPS52Q8N1B4 AC126124.2-201ENST00000413542 321 ntBASIC3.51□□□□□ -1.85
VPS52Q8N1B4 AC114491.1-201ENST00000416095 246 ntBASIC3.51□□□□□ -1.85
VPS52Q8N1B4 AC245291.1-201ENST00000419501 328 ntBASIC3.51□□□□□ -1.85
VPS52Q8N1B4 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
VPS52Q8N1B4 MTCO1P20-201ENST00000425366 358 ntBASIC3.51□□□□□ -1.85
VPS52Q8N1B4 RPL7L1P10-201ENST00000427790 463 ntBASIC3.51□□□□□ -1.85
VPS52Q8N1B4 AC093106.2-201ENST00000428212 385 ntBASIC3.51□□□□□ -1.85
VPS52Q8N1B4 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC3.51□□□□□ -1.85
VPS52Q8N1B4 AL606489.2-201ENST00000433886 234 ntBASIC3.51□□□□□ -1.85
VPS52Q8N1B4 SNRPEP4-201ENST00000435815 279 ntBASIC3.51□□□□□ -1.85
VPS52Q8N1B4 RPL7P54-201ENST00000438336 674 ntBASIC3.51□□□□□ -1.85
VPS52Q8N1B4 AC016691.1-201ENST00000441321 413 ntBASIC3.51□□□□□ -1.85
VPS52Q8N1B4 AC008264.1-201ENST00000447612 367 ntBASIC3.51□□□□□ -1.85
VPS52Q8N1B4 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC3.51□□□□□ -1.85
VPS52Q8N1B4 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC3.51□□□□□ -1.85
VPS52Q8N1B4 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC3.51□□□□□ -1.85
VPS52Q8N1B4 HMGN1P18-201ENST00000457642 277 ntBASIC3.51□□□□□ -1.85
VPS52Q8N1B4 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC3.51□□□□□ -1.85
VPS52Q8N1B4 RNU6-261P-201ENST00000459506 102 ntBASIC3.51□□□□□ -1.85
VPS52Q8N1B4 ENSA-210ENST00000503241 574 ntTSL 3 BASIC3.51□□□□□ -1.85
VPS52Q8N1B4 RNU6-927P-201ENST00000516199 100 ntBASIC3.51□□□□□ -1.85
VPS52Q8N1B4 Y_RNA.704-201ENST00000516851 102 ntBASIC3.51□□□□□ -1.85
VPS52Q8N1B4 RNU6-835P-201ENST00000516974 104 ntBASIC3.51□□□□□ -1.85
VPS52Q8N1B4 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC3.51□□□□□ -1.85
VPS52Q8N1B4 AC015917.1-201ENST00000579654 510 ntBASIC3.51□□□□□ -1.85
VPS52Q8N1B4 AL365204.3-201ENST00000612448 685 ntBASIC3.51□□□□□ -1.85
VPS52Q8N1B4 AC090132.2-201ENST00000615881 347 ntBASIC3.51□□□□□ -1.85
VPS52Q8N1B4 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC3.51□□□□□ -1.85
VPS52Q8N1B4 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC3.51□□□□□ -1.85
VPS52Q8N1B4 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.51□□□□□ -1.85
VPS52Q8N1B4 OR4G2P-202ENST00000641004 1759 ntBASIC3.51□□□□□ -1.85
VPS52Q8N1B4 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
VPS52Q8N1B4 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
VPS52Q8N1B4 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
VPS52Q8N1B4 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
VPS52Q8N1B4 AC017071.1-201ENST00000564407 2204 ntBASIC3.5□□□□□ -1.85
VPS52Q8N1B4 RNU6-61P-201ENST00000365528 109 ntBASIC3.5□□□□□ -1.85
VPS52Q8N1B4 SNORA24.1-201ENST00000384401 135 ntBASIC3.5□□□□□ -1.85
VPS52Q8N1B4 AL138885.1-201ENST00000405921 675 ntBASIC3.5□□□□□ -1.85
VPS52Q8N1B4 RPL5P18-201ENST00000406671 891 ntBASIC3.5□□□□□ -1.85
VPS52Q8N1B4 RNU6-908P-201ENST00000410160 94 ntBASIC3.5□□□□□ -1.85
VPS52Q8N1B4 AL356968.1-201ENST00000416622 474 ntBASIC3.5□□□□□ -1.85
VPS52Q8N1B4 MTND1P23-201ENST00000416931 372 ntBASIC3.5□□□□□ -1.85
VPS52Q8N1B4 USP9YP27-201ENST00000418455 438 ntBASIC3.5□□□□□ -1.85
VPS52Q8N1B4 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC3.5□□□□□ -1.85
VPS52Q8N1B4 AC236972.1-201ENST00000433225 199 ntBASIC3.5□□□□□ -1.85
VPS52Q8N1B4 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
VPS52Q8N1B4 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC3.5□□□□□ -1.85
VPS52Q8N1B4 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC3.5□□□□□ -1.85
VPS52Q8N1B4 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.5□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 122.4 ms