Protein–RNA interactions for Protein: Q8IZC6

COL27A1, Collagen alpha-1(XXVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1Q8IZC6 AC012435.1-202ENST00000568772 240 ntBASIC1.94□□□□□ -2.1
COL27A1Q8IZC6 AL353778.1-201ENST00000603149 408 ntBASIC1.94□□□□□ -2.1
COL27A1Q8IZC6 CLPTM1LP1-201ENST00000604519 484 ntBASIC1.94□□□□□ -2.1
COL27A1Q8IZC6 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC1.94□□□□□ -2.1
COL27A1Q8IZC6 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC1.94□□□□□ -2.1
COL27A1Q8IZC6 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC1.94□□□□□ -2.1
COL27A1Q8IZC6 AC007494.3-201ENST00000624660 743 ntBASIC1.94□□□□□ -2.1
COL27A1Q8IZC6 AC097655.1-201ENST00000635075 318 ntBASIC1.94□□□□□ -2.1
COL27A1Q8IZC6 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
COL27A1Q8IZC6 MTND4P4-201ENST00000439033 1366 ntBASIC1.94□□□□□ -2.1
COL27A1Q8IZC6 AL445523.1-201ENST00000451184 1362 ntBASIC1.94□□□□□ -2.1
COL27A1Q8IZC6 AC009902.3-201ENST00000606235 2172 ntBASIC1.94□□□□□ -2.1
COL27A1Q8IZC6 SNORD116-8-201ENST00000384365 95 ntBASIC1.94□□□□□ -2.1
COL27A1Q8IZC6 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC1.94□□□□□ -2.1
COL27A1Q8IZC6 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC1.94□□□□□ -2.1
COL27A1Q8IZC6 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC1.94□□□□□ -2.1
COL27A1Q8IZC6 AC092573.2-201ENST00000434546 243 ntBASIC1.94□□□□□ -2.1
COL27A1Q8IZC6 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC1.94□□□□□ -2.1
COL27A1Q8IZC6 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC1.94□□□□□ -2.1
COL27A1Q8IZC6 AC118469.1-201ENST00000442943 488 ntBASIC1.94□□□□□ -2.1
COL27A1Q8IZC6 SETP11-201ENST00000473027 690 ntBASIC1.94□□□□□ -2.1
COL27A1Q8IZC6 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC1.94□□□□□ -2.1
COL27A1Q8IZC6 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC1.94□□□□□ -2.1
COL27A1Q8IZC6 RNU6-759P-201ENST00000516740 103 ntBASIC1.94□□□□□ -2.1
COL27A1Q8IZC6 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC1.94□□□□□ -2.1
COL27A1Q8IZC6 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC1.94□□□□□ -2.1
COL27A1Q8IZC6 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC1.94□□□□□ -2.1
COL27A1Q8IZC6 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC1.94□□□□□ -2.1
COL27A1Q8IZC6 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.94□□□□□ -2.1
COL27A1Q8IZC6 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC1.94□□□□□ -2.1
COL27A1Q8IZC6 BNIP3P23-201ENST00000599655 511 ntBASIC1.94□□□□□ -2.1
COL27A1Q8IZC6 Z94722.1-201ENST00000604328 474 ntBASIC1.94□□□□□ -2.1
COL27A1Q8IZC6 AC121334.2-201ENST00000605387 271 ntBASIC1.94□□□□□ -2.1
COL27A1Q8IZC6 AC011939.3-201ENST00000613686 466 ntBASIC1.94□□□□□ -2.1
COL27A1Q8IZC6 AC091834.1-201ENST00000614543 472 ntBASIC1.94□□□□□ -2.1
COL27A1Q8IZC6 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC1.93□□□□□ -2.1
COL27A1Q8IZC6 API5P2-201ENST00000397055 1498 ntBASIC1.93□□□□□ -2.1
COL27A1Q8IZC6 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.93□□□□□ -2.1
COL27A1Q8IZC6 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
COL27A1Q8IZC6 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC1.93□□□□□ -2.1
COL27A1Q8IZC6 RNU6-701P-201ENST00000384059 107 ntBASIC1.93□□□□□ -2.1
COL27A1Q8IZC6 RNA5SP344-201ENST00000411081 104 ntBASIC1.93□□□□□ -2.1
COL27A1Q8IZC6 RNA5SP247-201ENST00000411181 105 ntBASIC1.93□□□□□ -2.1
COL27A1Q8IZC6 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC1.93□□□□□ -2.1
COL27A1Q8IZC6 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC1.93□□□□□ -2.1
COL27A1Q8IZC6 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC1.93□□□□□ -2.1
COL27A1Q8IZC6 MTND1P20-201ENST00000430341 950 ntBASIC1.93□□□□□ -2.1
COL27A1Q8IZC6 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC1.93□□□□□ -2.1
COL27A1Q8IZC6 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC1.93□□□□□ -2.1
COL27A1Q8IZC6 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC1.93□□□□□ -2.1
COL27A1Q8IZC6 AL592447.1-201ENST00000447592 540 ntBASIC1.93□□□□□ -2.1
COL27A1Q8IZC6 SNORD97-201ENST00000459187 142 ntBASIC1.93□□□□□ -2.1
COL27A1Q8IZC6 RPL38P4-201ENST00000502376 214 ntBASIC1.93□□□□□ -2.1
COL27A1Q8IZC6 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC1.93□□□□□ -2.1
COL27A1Q8IZC6 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC1.93□□□□□ -2.1
COL27A1Q8IZC6 RNU6-1003P-201ENST00000517099 105 ntBASIC1.93□□□□□ -2.1
COL27A1Q8IZC6 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC1.93□□□□□ -2.1
COL27A1Q8IZC6 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
COL27A1Q8IZC6 AC107214.2-201ENST00000608204 634 ntBASIC1.93□□□□□ -2.1
COL27A1Q8IZC6 AC004908.2-201ENST00000609090 574 ntBASIC1.93□□□□□ -2.1
COL27A1Q8IZC6 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC1.93□□□□□ -2.1
COL27A1Q8IZC6 SNORA50A-202ENST00000629536 136 ntBASIC1.93□□□□□ -2.1
COL27A1Q8IZC6 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC1.93□□□□□ -2.1
COL27A1Q8IZC6 AL138713.1-201ENST00000624026 2130 ntBASIC1.93□□□□□ -2.1
COL27A1Q8IZC6 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC1.93□□□□□ -2.1
COL27A1Q8IZC6 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC1.93□□□□□ -2.1
COL27A1Q8IZC6 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC1.92□□□□□ -2.1
COL27A1Q8IZC6 RNU6-501P-201ENST00000364072 100 ntBASIC1.92□□□□□ -2.1
COL27A1Q8IZC6 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC1.92□□□□□ -2.1
COL27A1Q8IZC6 AC109780.2-201ENST00000413467 845 ntBASIC1.92□□□□□ -2.1
COL27A1Q8IZC6 UBE2FP1-201ENST00000416536 447 ntBASIC1.92□□□□□ -2.1
COL27A1Q8IZC6 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC1.92□□□□□ -2.1
COL27A1Q8IZC6 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC1.92□□□□□ -2.1
COL27A1Q8IZC6 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC1.92□□□□□ -2.1
COL27A1Q8IZC6 RSU1P2-202ENST00000437884 485 ntBASIC1.92□□□□□ -2.1
COL27A1Q8IZC6 SNORD42A-201ENST00000459584 64 ntBASIC1.92□□□□□ -2.1
COL27A1Q8IZC6 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
COL27A1Q8IZC6 RNU6-798P-201ENST00000516912 103 ntBASIC1.92□□□□□ -2.1
COL27A1Q8IZC6 RNU6-201P-201ENST00000517100 61 ntBASIC1.92□□□□□ -2.1
COL27A1Q8IZC6 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC1.92□□□□□ -2.1
COL27A1Q8IZC6 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC1.92□□□□□ -2.1
COL27A1Q8IZC6 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC1.92□□□□□ -2.1
COL27A1Q8IZC6 AL353997.5-201ENST00000618886 171 ntBASIC1.92□□□□□ -2.1
COL27A1Q8IZC6 AL603755.1-201ENST00000619504 163 ntBASIC1.92□□□□□ -2.1
COL27A1Q8IZC6 SDAD1P2-201ENST00000441308 2028 ntBASIC1.92□□□□□ -2.1
COL27A1Q8IZC6 MTND5P33-201ENST00000571250 1450 ntBASIC1.92□□□□□ -2.1
COL27A1Q8IZC6 AC012321.1-201ENST00000561622 1588 ntBASIC1.92□□□□□ -2.1
COL27A1Q8IZC6 TPTE2P4-201ENST00000258589 1605 ntBASIC1.92□□□□□ -2.1
COL27A1Q8IZC6 PABPC1P9-201ENST00000426076 1612 ntBASIC1.92□□□□□ -2.1
COL27A1Q8IZC6 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC1.92□□□□□ -2.1
COL27A1Q8IZC6 RNU6-217P-201ENST00000384164 104 ntBASIC1.92□□□□□ -2.1
COL27A1Q8IZC6 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC1.92□□□□□ -2.1
COL27A1Q8IZC6 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC1.92□□□□□ -2.1
COL27A1Q8IZC6 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC1.92□□□□□ -2.1
COL27A1Q8IZC6 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC1.92□□□□□ -2.1
COL27A1Q8IZC6 AC108667.1-201ENST00000428618 249 ntBASIC1.92□□□□□ -2.1
COL27A1Q8IZC6 MED14P1-201ENST00000430517 648 ntBASIC1.92□□□□□ -2.1
COL27A1Q8IZC6 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC1.92□□□□□ -2.1
COL27A1Q8IZC6 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC1.92□□□□□ -2.1
COL27A1Q8IZC6 CR769767.1-201ENST00000436337 346 ntBASIC1.92□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 115.3 ms