Protein–RNA interactions for Protein: Q86UA1

PRPF39, Pre-mRNA-processing factor 39, humanhuman

Known RBP Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39Q86UA1 RNU6-750P-201ENST00000390946 107 ntBASIC3.04□□□□□ -1.92
PRPF39Q86UA1 RNA5SP274-201ENST00000410484 108 ntBASIC3.04□□□□□ -1.92
PRPF39Q86UA1 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC3.04□□□□□ -1.92
PRPF39Q86UA1 AC092809.3-201ENST00000415453 231 ntBASIC3.04□□□□□ -1.92
PRPF39Q86UA1 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC3.04□□□□□ -1.92
PRPF39Q86UA1 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC3.04□□□□□ -1.92
PRPF39Q86UA1 ISCA1P6-201ENST00000427740 390 ntBASIC3.04□□□□□ -1.92
PRPF39Q86UA1 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC3.04□□□□□ -1.92
PRPF39Q86UA1 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC3.04□□□□□ -1.92
PRPF39Q86UA1 AC104850.1-201ENST00000435940 476 ntBASIC3.04□□□□□ -1.92
PRPF39Q86UA1 AC025750.2-201ENST00000442609 450 ntBASIC3.04□□□□□ -1.92
PRPF39Q86UA1 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC3.04□□□□□ -1.92
PRPF39Q86UA1 RPS27AP8-201ENST00000452665 445 ntBASIC3.04□□□□□ -1.92
PRPF39Q86UA1 MTATP6P7-201ENST00000453315 681 ntBASIC3.04□□□□□ -1.92
PRPF39Q86UA1 RNU6ATAC13P-201ENST00000516152 131 ntBASIC3.04□□□□□ -1.92
PRPF39Q86UA1 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC3.04□□□□□ -1.92
PRPF39Q86UA1 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.04□□□□□ -1.92
PRPF39Q86UA1 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC3.04□□□□□ -1.92
PRPF39Q86UA1 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC3.04□□□□□ -1.92
PRPF39Q86UA1 Z94722.1-201ENST00000604328 474 ntBASIC3.04□□□□□ -1.92
PRPF39Q86UA1 AC131902.3-201ENST00000611767 581 ntBASIC3.04□□□□□ -1.92
PRPF39Q86UA1 AC091304.9-201ENST00000612091 226 ntBASIC3.04□□□□□ -1.92
PRPF39Q86UA1 MIR6852-201ENST00000621699 66 ntBASIC3.04□□□□□ -1.92
PRPF39Q86UA1 AL603839.4-201ENST00000624658 1005 ntBASIC3.04□□□□□ -1.92
PRPF39Q86UA1 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
PRPF39Q86UA1 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.04□□□□□ -1.92
PRPF39Q86UA1 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC3.03□□□□□ -1.92
PRPF39Q86UA1 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC3.03□□□□□ -1.92
PRPF39Q86UA1 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC3.03□□□□□ -1.92
PRPF39Q86UA1 U8.3-201ENST00000363321 132 ntBASIC3.03□□□□□ -1.92
PRPF39Q86UA1 SNORA5B-201ENST00000363786 132 ntBASIC3.03□□□□□ -1.92
PRPF39Q86UA1 RNU4-91P-201ENST00000364778 135 ntBASIC3.03□□□□□ -1.92
PRPF39Q86UA1 RNU6-1180P-201ENST00000364935 107 ntBASIC3.03□□□□□ -1.92
PRPF39Q86UA1 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC3.03□□□□□ -1.92
PRPF39Q86UA1 Y_RNA.500-201ENST00000384466 111 ntBASIC3.03□□□□□ -1.92
PRPF39Q86UA1 Y_RNA.510-201ENST00000384511 114 ntBASIC3.03□□□□□ -1.92
PRPF39Q86UA1 RNU2-39P-201ENST00000410604 198 ntBASIC3.03□□□□□ -1.92
PRPF39Q86UA1 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC3.03□□□□□ -1.92
PRPF39Q86UA1 AC080125.1-201ENST00000414888 684 ntBASIC3.03□□□□□ -1.92
PRPF39Q86UA1 AC096649.2-201ENST00000416186 393 ntBASIC3.03□□□□□ -1.92
PRPF39Q86UA1 SETP8-201ENST00000435341 628 ntBASIC3.03□□□□□ -1.92
PRPF39Q86UA1 RPS29P6-201ENST00000438196 145 ntBASIC3.03□□□□□ -1.92
PRPF39Q86UA1 PGBD4P3-201ENST00000440731 581 ntBASIC3.03□□□□□ -1.92
PRPF39Q86UA1 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC3.03□□□□□ -1.92
PRPF39Q86UA1 AL136380.1-201ENST00000447970 162 ntBASIC3.03□□□□□ -1.92
PRPF39Q86UA1 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC3.03□□□□□ -1.92
PRPF39Q86UA1 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC3.03□□□□□ -1.92
PRPF39Q86UA1 AC117522.1-201ENST00000509821 380 ntBASIC3.03□□□□□ -1.92
PRPF39Q86UA1 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC3.03□□□□□ -1.92
PRPF39Q86UA1 AC091965.2-201ENST00000512324 613 ntBASIC3.03□□□□□ -1.92
PRPF39Q86UA1 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC3.03□□□□□ -1.92
PRPF39Q86UA1 RNU6-914P-201ENST00000516749 109 ntBASIC3.03□□□□□ -1.92
PRPF39Q86UA1 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC3.03□□□□□ -1.92
PRPF39Q86UA1 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC3.03□□□□□ -1.92
PRPF39Q86UA1 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
PRPF39Q86UA1 GLYCAM1-201ENST00000546596 285 ntBASIC3.03□□□□□ -1.92
PRPF39Q86UA1 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC3.03□□□□□ -1.92
PRPF39Q86UA1 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC3.03□□□□□ -1.92
PRPF39Q86UA1 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC3.03□□□□□ -1.92
PRPF39Q86UA1 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC3.03□□□□□ -1.92
PRPF39Q86UA1 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC3.03□□□□□ -1.92
PRPF39Q86UA1 MIR4782-201ENST00000577987 79 ntBASIC3.03□□□□□ -1.92
PRPF39Q86UA1 MIR3167-201ENST00000579623 85 ntBASIC3.03□□□□□ -1.92
PRPF39Q86UA1 AC103810.1-201ENST00000579873 453 ntBASIC3.03□□□□□ -1.92
PRPF39Q86UA1 OR2AS2P-201ENST00000606902 342 ntBASIC3.03□□□□□ -1.92
PRPF39Q86UA1 AL451064.1-201ENST00000607718 471 ntBASIC3.03□□□□□ -1.92
PRPF39Q86UA1 PISRT1-201ENST00000626175 531 ntBASIC3.03□□□□□ -1.92
PRPF39Q86UA1 MIR3974-201ENST00000637126 96 ntBASIC3.03□□□□□ -1.92
PRPF39Q86UA1 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.03□□□□□ -1.92
PRPF39Q86UA1 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC3.03□□□□□ -1.92
PRPF39Q86UA1 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.03□□□□□ -1.93
PRPF39Q86UA1 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
PRPF39Q86UA1 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
PRPF39Q86UA1 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.02□□□□□ -1.93
PRPF39Q86UA1 AC010889.1-201ENST00000566193 2666 ntBASIC3.02□□□□□ -1.93
PRPF39Q86UA1 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.02□□□□□ -1.93
PRPF39Q86UA1 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
PRPF39Q86UA1 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
PRPF39Q86UA1 Y_RNA.201-201ENST00000364052 96 ntBASIC3.02□□□□□ -1.93
PRPF39Q86UA1 SNORD56.5-201ENST00000364281 72 ntBASIC3.02□□□□□ -1.93
PRPF39Q86UA1 RNA5SP344-201ENST00000411081 104 ntBASIC3.02□□□□□ -1.93
PRPF39Q86UA1 RNU6-195P-201ENST00000411352 109 ntBASIC3.02□□□□□ -1.93
PRPF39Q86UA1 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC3.02□□□□□ -1.93
PRPF39Q86UA1 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC3.02□□□□□ -1.93
PRPF39Q86UA1 AC236972.1-201ENST00000433225 199 ntBASIC3.02□□□□□ -1.93
PRPF39Q86UA1 AL513043.1-201ENST00000439124 535 ntBASIC3.02□□□□□ -1.93
PRPF39Q86UA1 DPPA3P1-201ENST00000448050 469 ntBASIC3.02□□□□□ -1.93
PRPF39Q86UA1 AC233279.1-201ENST00000455300 423 ntBASIC3.02□□□□□ -1.93
PRPF39Q86UA1 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC3.02□□□□□ -1.93
PRPF39Q86UA1 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC3.02□□□□□ -1.93
PRPF39Q86UA1 AC083906.5-201ENST00000503722 328 ntBASIC3.02□□□□□ -1.93
PRPF39Q86UA1 AC010486.3-201ENST00000511602 785 ntBASIC3.02□□□□□ -1.93
PRPF39Q86UA1 SCGB1D5P-201ENST00000515134 247 ntBASIC3.02□□□□□ -1.93
PRPF39Q86UA1 AC022616.3-201ENST00000523940 148 ntBASIC3.02□□□□□ -1.93
PRPF39Q86UA1 AC107016.2-201ENST00000547968 190 ntBASIC3.02□□□□□ -1.93
PRPF39Q86UA1 AC007151.1-201ENST00000572774 483 ntBASIC3.02□□□□□ -1.93
PRPF39Q86UA1 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
PRPF39Q86UA1 AC073544.2-201ENST00000601155 540 ntBASIC3.02□□□□□ -1.93
PRPF39Q86UA1 AC025811.1-201ENST00000604312 472 ntBASIC3.02□□□□□ -1.93
PRPF39Q86UA1 AL359547.2-201ENST00000615810 418 ntBASIC3.02□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 146.6 ms