Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 AL109809.4-201ENST00000603520 2185 ntBASIC4.21□□□□□ -1.73
ATG4DQ86TL0 MAPK10-286ENST00000641208 8747 ntBASIC4.21□□□□□ -1.73
ATG4DQ86TL0 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
ATG4DQ86TL0 MAPK10-263ENST00000641052 4307 ntBASIC4.21□□□□□ -1.74
ATG4DQ86TL0 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC4.21□□□□□ -1.74
ATG4DQ86TL0 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
ATG4DQ86TL0 RNU6-37P-201ENST00000362692 107 ntBASIC4.21□□□□□ -1.74
ATG4DQ86TL0 U3.6-201ENST00000363622 211 ntBASIC4.21□□□□□ -1.74
ATG4DQ86TL0 RNU6-11P-201ENST00000364234 107 ntBASIC4.21□□□□□ -1.74
ATG4DQ86TL0 RN7SKP227-201ENST00000364445 330 ntBASIC4.21□□□□□ -1.74
ATG4DQ86TL0 RNU6-7-201ENST00000364784 107 ntBASIC4.21□□□□□ -1.74
ATG4DQ86TL0 RNU6-8-201ENST00000365467 107 ntBASIC4.21□□□□□ -1.74
ATG4DQ86TL0 RNU6-827P-201ENST00000365553 106 ntBASIC4.21□□□□□ -1.74
ATG4DQ86TL0 RNU6-25P-201ENST00000383873 107 ntBASIC4.21□□□□□ -1.74
ATG4DQ86TL0 RNU6-1-201ENST00000383898 107 ntBASIC4.21□□□□□ -1.74
ATG4DQ86TL0 RNU6-36P-201ENST00000384172 107 ntBASIC4.21□□□□□ -1.74
ATG4DQ86TL0 RNU6-4P-201ENST00000384205 107 ntBASIC4.21□□□□□ -1.74
ATG4DQ86TL0 RNU6-5P-201ENST00000384238 107 ntBASIC4.21□□□□□ -1.74
ATG4DQ86TL0 RNU6-3P-201ENST00000384314 107 ntBASIC4.21□□□□□ -1.74
ATG4DQ86TL0 RNU6-16P-201ENST00000384385 107 ntBASIC4.21□□□□□ -1.74
ATG4DQ86TL0 Y_RNA.504-201ENST00000384481 104 ntBASIC4.21□□□□□ -1.74
ATG4DQ86TL0 RNU6-15P-201ENST00000384534 107 ntBASIC4.21□□□□□ -1.74
ATG4DQ86TL0 RNU6-2-201ENST00000384627 107 ntBASIC4.21□□□□□ -1.74
ATG4DQ86TL0 RNU6-29P-201ENST00000384637 107 ntBASIC4.21□□□□□ -1.74
ATG4DQ86TL0 RNU6-9-201ENST00000384776 107 ntBASIC4.21□□□□□ -1.74
ATG4DQ86TL0 SNORD96B-201ENST00000386148 79 ntBASIC4.21□□□□□ -1.74
ATG4DQ86TL0 ENSAP1-201ENST00000392855 326 ntBASIC4.21□□□□□ -1.74
ATG4DQ86TL0 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC4.21□□□□□ -1.74
ATG4DQ86TL0 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC4.21□□□□□ -1.74
ATG4DQ86TL0 AL391219.1-201ENST00000422570 483 ntBASIC4.21□□□□□ -1.74
ATG4DQ86TL0 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
ATG4DQ86TL0 RPS6P12-201ENST00000432491 726 ntBASIC4.21□□□□□ -1.74
ATG4DQ86TL0 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC4.21□□□□□ -1.74
ATG4DQ86TL0 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC4.21□□□□□ -1.74
ATG4DQ86TL0 EEF1A1P1-201ENST00000447052 739 ntBASIC4.21□□□□□ -1.74
ATG4DQ86TL0 AC079354.2-201ENST00000453523 154 ntBASIC4.21□□□□□ -1.74
ATG4DQ86TL0 Y_RNA.638-201ENST00000459374 113 ntBASIC4.21□□□□□ -1.74
ATG4DQ86TL0 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC4.21□□□□□ -1.74
ATG4DQ86TL0 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC4.21□□□□□ -1.74
ATG4DQ86TL0 KRTAP5-14P-201ENST00000502328 121 ntBASIC4.21□□□□□ -1.74
ATG4DQ86TL0 HMGN1P11-201ENST00000508668 303 ntBASIC4.21□□□□□ -1.74
ATG4DQ86TL0 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC4.21□□□□□ -1.74
ATG4DQ86TL0 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC4.21□□□□□ -1.74
ATG4DQ86TL0 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC4.21□□□□□ -1.74
ATG4DQ86TL0 HIGD1AP3-201ENST00000515857 278 ntBASIC4.21□□□□□ -1.74
ATG4DQ86TL0 RNU2-31P-201ENST00000516954 155 ntBASIC4.21□□□□□ -1.74
ATG4DQ86TL0 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC4.21□□□□□ -1.74
ATG4DQ86TL0 OR4H12P-201ENST00000556269 907 ntBASIC4.21□□□□□ -1.74
ATG4DQ86TL0 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC4.21□□□□□ -1.74
ATG4DQ86TL0 MIR4675-201ENST00000577898 77 ntBASIC4.21□□□□□ -1.74
ATG4DQ86TL0 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
ATG4DQ86TL0 AC234771.5-201ENST00000600161 514 ntBASIC4.21□□□□□ -1.74
ATG4DQ86TL0 RNU6-6P-201ENST00000606623 107 ntBASIC4.21□□□□□ -1.74
ATG4DQ86TL0 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC4.21□□□□□ -1.74
ATG4DQ86TL0 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC4.21□□□□□ -1.74
ATG4DQ86TL0 AC108706.1-201ENST00000611053 297 ntBASIC4.21□□□□□ -1.74
ATG4DQ86TL0 MIR378J-201ENST00000611988 109 ntBASIC4.21□□□□□ -1.74
ATG4DQ86TL0 MIR6780A-201ENST00000615089 68 ntBASIC4.21□□□□□ -1.74
ATG4DQ86TL0 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
ATG4DQ86TL0 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC4.21□□□□□ -1.74
ATG4DQ86TL0 CARF-203ENST00000414439 2099 ntTSL 2 BASIC4.21□□□□□ -1.74
ATG4DQ86TL0 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC4.21□□□□□ -1.74
ATG4DQ86TL0 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC4.21□□□□□ -1.74
ATG4DQ86TL0 AC093535.2-201ENST00000624769 2326 ntBASIC4.21□□□□□ -1.74
ATG4DQ86TL0 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC4.2□□□□□ -1.74
ATG4DQ86TL0 MAPK10-320ENST00000641462 6696 ntBASIC4.2□□□□□ -1.74
ATG4DQ86TL0 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
ATG4DQ86TL0 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
ATG4DQ86TL0 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
ATG4DQ86TL0 AC079741.1-201ENST00000321498 212 ntBASIC4.2□□□□□ -1.74
ATG4DQ86TL0 AC126755.2-208ENST00000327792 462 ntBASIC4.2□□□□□ -1.74
ATG4DQ86TL0 AC138969.1-213ENST00000331436 462 ntBASIC4.2□□□□□ -1.74
ATG4DQ86TL0 RNU6-215P-201ENST00000365169 102 ntBASIC4.2□□□□□ -1.74
ATG4DQ86TL0 Y_RNA.343-201ENST00000365354 112 ntBASIC4.2□□□□□ -1.74
ATG4DQ86TL0 Y_RNA.534-201ENST00000384599 112 ntBASIC4.2□□□□□ -1.74
ATG4DQ86TL0 RNU6-658P-201ENST00000384606 106 ntBASIC4.2□□□□□ -1.74
ATG4DQ86TL0 RNA5SP332-201ENST00000391063 115 ntBASIC4.2□□□□□ -1.74
ATG4DQ86TL0 RPS16P5-201ENST00000406501 404 ntBASIC4.2□□□□□ -1.74
ATG4DQ86TL0 RNU2-50P-201ENST00000410494 143 ntBASIC4.2□□□□□ -1.74
ATG4DQ86TL0 AC016397.1-201ENST00000412463 242 ntBASIC4.2□□□□□ -1.74
ATG4DQ86TL0 FAR2P2-201ENST00000413041 594 ntBASIC4.2□□□□□ -1.74
ATG4DQ86TL0 RPL31P2-201ENST00000413849 377 ntBASIC4.2□□□□□ -1.74
ATG4DQ86TL0 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC4.2□□□□□ -1.74
ATG4DQ86TL0 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC4.2□□□□□ -1.74
ATG4DQ86TL0 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC4.2□□□□□ -1.74
ATG4DQ86TL0 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC4.2□□□□□ -1.74
ATG4DQ86TL0 RPL26P6-201ENST00000440913 438 ntBASIC4.2□□□□□ -1.74
ATG4DQ86TL0 SSXP4-201ENST00000451349 245 ntBASIC4.2□□□□□ -1.74
ATG4DQ86TL0 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC4.2□□□□□ -1.74
ATG4DQ86TL0 snoU109.4-201ENST00000458953 143 ntBASIC4.2□□□□□ -1.74
ATG4DQ86TL0 RN7SKP210-201ENST00000459176 261 ntBASIC4.2□□□□□ -1.74
ATG4DQ86TL0 U8.21-201ENST00000459536 136 ntBASIC4.2□□□□□ -1.74
ATG4DQ86TL0 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC4.2□□□□□ -1.74
ATG4DQ86TL0 AC025755.1-201ENST00000521306 278 ntBASIC4.2□□□□□ -1.74
ATG4DQ86TL0 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC4.2□□□□□ -1.74
ATG4DQ86TL0 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC4.2□□□□□ -1.74
ATG4DQ86TL0 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC4.2□□□□□ -1.74
ATG4DQ86TL0 MIR6798-201ENST00000612887 67 ntBASIC4.2□□□□□ -1.74
ATG4DQ86TL0 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC4.2□□□□□ -1.74
ATG4DQ86TL0 AC084757.4-201ENST00000616350 526 ntBASIC4.2□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 82.1 ms