Protein–RNA interactions for Protein: Q7Z3B4

NUP54, Nucleoporin p54, humanhuman

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54Q7Z3B4 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
NUP54Q7Z3B4 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
NUP54Q7Z3B4 Y_RNA.22-201ENST00000362492 102 ntBASIC2.91□□□□□ -1.94
NUP54Q7Z3B4 SNORA70.4-201ENST00000365509 134 ntBASIC2.91□□□□□ -1.94
NUP54Q7Z3B4 RNU6-108P-201ENST00000365558 107 ntBASIC2.91□□□□□ -1.94
NUP54Q7Z3B4 SET-203ENST00000372688 801 ntTSL 2 BASIC2.91□□□□□ -1.94
NUP54Q7Z3B4 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC2.91□□□□□ -1.94
NUP54Q7Z3B4 RNU6-1042P-201ENST00000384204 107 ntBASIC2.91□□□□□ -1.94
NUP54Q7Z3B4 SNORA7.4-201ENST00000384249 137 ntBASIC2.91□□□□□ -1.94
NUP54Q7Z3B4 Y_RNA.559-201ENST00000384686 107 ntBASIC2.91□□□□□ -1.94
NUP54Q7Z3B4 MIR887-201ENST00000401258 79 ntBASIC2.91□□□□□ -1.94
NUP54Q7Z3B4 RNU2-39P-201ENST00000410604 198 ntBASIC2.91□□□□□ -1.94
NUP54Q7Z3B4 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC2.91□□□□□ -1.94
NUP54Q7Z3B4 AC096649.2-201ENST00000416186 393 ntBASIC2.91□□□□□ -1.94
NUP54Q7Z3B4 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC2.91□□□□□ -1.94
NUP54Q7Z3B4 ISCA1P1-201ENST00000426679 387 ntBASIC2.91□□□□□ -1.94
NUP54Q7Z3B4 GPR143P-201ENST00000434155 205 ntBASIC2.91□□□□□ -1.94
NUP54Q7Z3B4 RPS15AP5-201ENST00000436276 388 ntBASIC2.91□□□□□ -1.94
NUP54Q7Z3B4 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC2.91□□□□□ -1.94
NUP54Q7Z3B4 RPS24P13-201ENST00000442520 397 ntBASIC2.91□□□□□ -1.94
NUP54Q7Z3B4 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC2.91□□□□□ -1.94
NUP54Q7Z3B4 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC2.91□□□□□ -1.94
NUP54Q7Z3B4 MTCO2P7-201ENST00000446518 666 ntBASIC2.91□□□□□ -1.94
NUP54Q7Z3B4 NANOGNBP1-201ENST00000448444 480 ntBASIC2.91□□□□□ -1.94
NUP54Q7Z3B4 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC2.91□□□□□ -1.94
NUP54Q7Z3B4 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC2.91□□□□□ -1.94
NUP54Q7Z3B4 RPL39P36-201ENST00000490784 156 ntBASIC2.91□□□□□ -1.94
NUP54Q7Z3B4 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC2.91□□□□□ -1.94
NUP54Q7Z3B4 RNU6-405P-201ENST00000516637 110 ntBASIC2.91□□□□□ -1.94
NUP54Q7Z3B4 RNU6-677P-201ENST00000516914 101 ntBASIC2.91□□□□□ -1.94
NUP54Q7Z3B4 RNU6-410P-201ENST00000517006 107 ntBASIC2.91□□□□□ -1.94
NUP54Q7Z3B4 AC007536.1-201ENST00000533382 349 ntBASIC2.91□□□□□ -1.94
NUP54Q7Z3B4 NACAP3-201ENST00000552100 481 ntBASIC2.91□□□□□ -1.94
NUP54Q7Z3B4 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC2.91□□□□□ -1.94
NUP54Q7Z3B4 AL391840.1-201ENST00000571144 367 ntBASIC2.91□□□□□ -1.94
NUP54Q7Z3B4 OR1M4P-201ENST00000589199 287 ntBASIC2.91□□□□□ -1.94
NUP54Q7Z3B4 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC2.91□□□□□ -1.94
NUP54Q7Z3B4 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC2.91□□□□□ -1.94
NUP54Q7Z3B4 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC2.91□□□□□ -1.94
NUP54Q7Z3B4 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC2.91□□□□□ -1.94
NUP54Q7Z3B4 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
NUP54Q7Z3B4 AC135776.4-201ENST00000624300 1904 ntBASIC2.9□□□□□ -1.95
NUP54Q7Z3B4 RNU6-623P-201ENST00000363143 105 ntBASIC2.9□□□□□ -1.95
NUP54Q7Z3B4 RNU6-1097P-201ENST00000363586 107 ntBASIC2.9□□□□□ -1.95
NUP54Q7Z3B4 U3.6-201ENST00000363622 211 ntBASIC2.9□□□□□ -1.95
NUP54Q7Z3B4 RNU6-884P-201ENST00000363889 107 ntBASIC2.9□□□□□ -1.95
NUP54Q7Z3B4 Y_RNA.318-201ENST00000365131 97 ntBASIC2.9□□□□□ -1.95
NUP54Q7Z3B4 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
NUP54Q7Z3B4 SNORD15B-201ENST00000384714 146 ntBASIC2.9□□□□□ -1.95
NUP54Q7Z3B4 Y_RNA.582-201ENST00000391023 95 ntBASIC2.9□□□□□ -1.95
NUP54Q7Z3B4 RNU6ATAC16P-201ENST00000408591 138 ntBASIC2.9□□□□□ -1.95
NUP54Q7Z3B4 RNU2-16P-201ENST00000410712 136 ntBASIC2.9□□□□□ -1.95
NUP54Q7Z3B4 NDUFS5P4-201ENST00000412983 318 ntBASIC2.9□□□□□ -1.95
NUP54Q7Z3B4 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC2.9□□□□□ -1.95
NUP54Q7Z3B4 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC2.9□□□□□ -1.95
NUP54Q7Z3B4 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC2.9□□□□□ -1.95
NUP54Q7Z3B4 VN1R108P-201ENST00000431580 830 ntBASIC2.9□□□□□ -1.95
NUP54Q7Z3B4 RPS12P18-201ENST00000442381 270 ntBASIC2.9□□□□□ -1.95
NUP54Q7Z3B4 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC2.9□□□□□ -1.95
NUP54Q7Z3B4 FABP5P15-201ENST00000453566 214 ntBASIC2.9□□□□□ -1.95
NUP54Q7Z3B4 OFD1P4Y-201ENST00000455273 1179 ntBASIC2.9□□□□□ -1.95
NUP54Q7Z3B4 AC117522.1-201ENST00000509821 380 ntBASIC2.9□□□□□ -1.95
NUP54Q7Z3B4 SCARNA11.3-201ENST00000517276 130 ntBASIC2.9□□□□□ -1.95
NUP54Q7Z3B4 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.9□□□□□ -1.95
NUP54Q7Z3B4 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC2.9□□□□□ -1.95
NUP54Q7Z3B4 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC2.9□□□□□ -1.95
NUP54Q7Z3B4 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC2.9□□□□□ -1.95
NUP54Q7Z3B4 AC103987.3-201ENST00000582071 292 ntBASIC2.9□□□□□ -1.95
NUP54Q7Z3B4 NDUFA8P1-201ENST00000605525 367 ntBASIC2.9□□□□□ -1.95
NUP54Q7Z3B4 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC2.9□□□□□ -1.95
NUP54Q7Z3B4 AC099506.2-201ENST00000623074 221 ntBASIC2.9□□□□□ -1.95
NUP54Q7Z3B4 MIR3651-201ENST00000630427 90 ntBASIC2.9□□□□□ -1.95
NUP54Q7Z3B4 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC2.9□□□□□ -1.95
NUP54Q7Z3B4 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC2.9□□□□□ -1.95
NUP54Q7Z3B4 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC2.9□□□□□ -1.95
NUP54Q7Z3B4 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
NUP54Q7Z3B4 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
NUP54Q7Z3B4 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC2.89□□□□□ -1.95
NUP54Q7Z3B4 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC2.89□□□□□ -1.95
NUP54Q7Z3B4 AL035425.3-201ENST00000564206 4996 ntBASIC2.89□□□□□ -1.95
NUP54Q7Z3B4 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
NUP54Q7Z3B4 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
NUP54Q7Z3B4 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
NUP54Q7Z3B4 RNU6-512P-201ENST00000364438 103 ntBASIC2.89□□□□□ -1.95
NUP54Q7Z3B4 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC2.89□□□□□ -1.95
NUP54Q7Z3B4 OR5H15-201ENST00000383696 930 ntBASIC2.89□□□□□ -1.95
NUP54Q7Z3B4 RNU6-641P-201ENST00000384006 107 ntBASIC2.89□□□□□ -1.95
NUP54Q7Z3B4 FGFR1OP2P1-201ENST00000395943 500 ntBASIC2.89□□□□□ -1.95
NUP54Q7Z3B4 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC2.89□□□□□ -1.95
NUP54Q7Z3B4 RNU6ATAC10P-201ENST00000408635 111 ntBASIC2.89□□□□□ -1.95
NUP54Q7Z3B4 RN7SKP123-201ENST00000410732 291 ntBASIC2.89□□□□□ -1.95
NUP54Q7Z3B4 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC2.89□□□□□ -1.95
NUP54Q7Z3B4 RPS12P24-201ENST00000412619 387 ntBASIC2.89□□□□□ -1.95
NUP54Q7Z3B4 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC2.89□□□□□ -1.95
NUP54Q7Z3B4 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC2.89□□□□□ -1.95
NUP54Q7Z3B4 GPM6BP2-201ENST00000432046 144 ntBASIC2.89□□□□□ -1.95
NUP54Q7Z3B4 RPS20P5-201ENST00000434808 360 ntBASIC2.89□□□□□ -1.95
NUP54Q7Z3B4 SNRPEP9-201ENST00000436794 238 ntBASIC2.89□□□□□ -1.95
NUP54Q7Z3B4 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC2.89□□□□□ -1.95
NUP54Q7Z3B4 MTND4P25-201ENST00000441039 533 ntBASIC2.89□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 81.7 ms