Protein–RNA interactions for Protein: Q6ZUS6

CCDC149, Coiled-coil domain-containing protein 149, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC149Q6ZUS6 RBM6-203ENST00000421682 684 ntTSL 2 BASIC3.8□□□□□ -1.8
CCDC149Q6ZUS6 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC3.8□□□□□ -1.8
CCDC149Q6ZUS6 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC3.8□□□□□ -1.8
CCDC149Q6ZUS6 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC3.8□□□□□ -1.8
CCDC149Q6ZUS6 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC3.8□□□□□ -1.8
CCDC149Q6ZUS6 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC3.8□□□□□ -1.8
CCDC149Q6ZUS6 RPL23AP11-201ENST00000475260 469 ntBASIC3.8□□□□□ -1.8
CCDC149Q6ZUS6 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC3.8□□□□□ -1.8
CCDC149Q6ZUS6 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC3.8□□□□□ -1.8
CCDC149Q6ZUS6 RNU1-103P-201ENST00000516502 125 ntBASIC3.8□□□□□ -1.8
CCDC149Q6ZUS6 HIGD1AP1-201ENST00000550979 275 ntBASIC3.8□□□□□ -1.8
CCDC149Q6ZUS6 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC3.8□□□□□ -1.8
CCDC149Q6ZUS6 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC3.8□□□□□ -1.8
CCDC149Q6ZUS6 AC068135.2-201ENST00000569293 1028 ntBASIC3.8□□□□□ -1.8
CCDC149Q6ZUS6 MIR3609-201ENST00000582661 80 ntBASIC3.8□□□□□ -1.8
CCDC149Q6ZUS6 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC3.8□□□□□ -1.8
CCDC149Q6ZUS6 AC004805.2-201ENST00000605382 482 ntBASIC3.8□□□□□ -1.8
CCDC149Q6ZUS6 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
CCDC149Q6ZUS6 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC3.8□□□□□ -1.8
CCDC149Q6ZUS6 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
CCDC149Q6ZUS6 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.8□□□□□ -1.8
CCDC149Q6ZUS6 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.8□□□□□ -1.8
CCDC149Q6ZUS6 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.8□□□□□ -1.8
CCDC149Q6ZUS6 HSPA8P4-201ENST00000511877 1920 ntBASIC3.8□□□□□ -1.8
CCDC149Q6ZUS6 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.79□□□□□ -1.8
CCDC149Q6ZUS6 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.79□□□□□ -1.8
CCDC149Q6ZUS6 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC3.79□□□□□ -1.8
CCDC149Q6ZUS6 ASNSP3-201ENST00000451989 1306 ntBASIC3.79□□□□□ -1.8
CCDC149Q6ZUS6 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
CCDC149Q6ZUS6 FTLP6-201ENST00000355274 422 ntBASIC3.79□□□□□ -1.8
CCDC149Q6ZUS6 RNU6-1283P-201ENST00000365314 105 ntBASIC3.79□□□□□ -1.8
CCDC149Q6ZUS6 PARD3-204ENST00000374768 799 ntTSL 3 BASIC3.79□□□□□ -1.8
CCDC149Q6ZUS6 SNORD37.1-201ENST00000390968 65 ntBASIC3.79□□□□□ -1.8
CCDC149Q6ZUS6 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.79□□□□□ -1.8
CCDC149Q6ZUS6 AL606923.1-201ENST00000406616 190 ntBASIC3.79□□□□□ -1.8
CCDC149Q6ZUS6 EEF1A1P40-201ENST00000412883 573 ntBASIC3.79□□□□□ -1.8
CCDC149Q6ZUS6 USP9YP6-201ENST00000413550 854 ntBASIC3.79□□□□□ -1.8
CCDC149Q6ZUS6 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC3.79□□□□□ -1.8
CCDC149Q6ZUS6 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC3.79□□□□□ -1.8
CCDC149Q6ZUS6 ATP5JP1-201ENST00000431631 322 ntBASIC3.79□□□□□ -1.8
CCDC149Q6ZUS6 RPL36AP53-201ENST00000432891 316 ntBASIC3.79□□□□□ -1.8
CCDC149Q6ZUS6 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC3.79□□□□□ -1.8
CCDC149Q6ZUS6 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC3.79□□□□□ -1.8
CCDC149Q6ZUS6 U3.44-201ENST00000458938 192 ntBASIC3.79□□□□□ -1.8
CCDC149Q6ZUS6 RPL38P4-201ENST00000502376 214 ntBASIC3.79□□□□□ -1.8
CCDC149Q6ZUS6 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CCDC149Q6ZUS6 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC3.79□□□□□ -1.8
CCDC149Q6ZUS6 RNU4-29P-201ENST00000515943 174 ntBASIC3.79□□□□□ -1.8
CCDC149Q6ZUS6 RN7SKP209-201ENST00000516888 304 ntBASIC3.79□□□□□ -1.8
CCDC149Q6ZUS6 PSMA2P1-201ENST00000526365 646 ntBASIC3.79□□□□□ -1.8
CCDC149Q6ZUS6 AL137161.1-201ENST00000532231 390 ntBASIC3.79□□□□□ -1.8
CCDC149Q6ZUS6 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC3.79□□□□□ -1.8
CCDC149Q6ZUS6 MIR4424-201ENST00000585257 86 ntBASIC3.79□□□□□ -1.8
CCDC149Q6ZUS6 NRBF2P5-201ENST00000603087 788 ntBASIC3.79□□□□□ -1.8
CCDC149Q6ZUS6 MIR486-1-201ENST00000612171 68 ntBASIC3.79□□□□□ -1.8
CCDC149Q6ZUS6 AL138880.2-201ENST00000616214 239 ntBASIC3.79□□□□□ -1.8
CCDC149Q6ZUS6 AP003355.3-201ENST00000623465 114 ntBASIC3.79□□□□□ -1.8
CCDC149Q6ZUS6 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CCDC149Q6ZUS6 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CCDC149Q6ZUS6 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
CCDC149Q6ZUS6 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CCDC149Q6ZUS6 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CCDC149Q6ZUS6 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
CCDC149Q6ZUS6 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.79□□□□□ -1.8
CCDC149Q6ZUS6 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
CCDC149Q6ZUS6 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
CCDC149Q6ZUS6 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.78□□□□□ -1.8
CCDC149Q6ZUS6 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
CCDC149Q6ZUS6 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC3.78□□□□□ -1.8
CCDC149Q6ZUS6 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.78□□□□□ -1.8
CCDC149Q6ZUS6 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.78□□□□□ -1.8
CCDC149Q6ZUS6 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
CCDC149Q6ZUS6 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
CCDC149Q6ZUS6 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
CCDC149Q6ZUS6 Z98941.1-201ENST00000407764 100 ntBASIC3.78□□□□□ -1.8
CCDC149Q6ZUS6 RNU2-68P-201ENST00000410878 191 ntBASIC3.78□□□□□ -1.8
CCDC149Q6ZUS6 OR9R1P-201ENST00000412200 877 ntBASIC3.78□□□□□ -1.8
CCDC149Q6ZUS6 RPL21P109-201ENST00000422213 475 ntBASIC3.78□□□□□ -1.8
CCDC149Q6ZUS6 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC3.78□□□□□ -1.8
CCDC149Q6ZUS6 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC3.78□□□□□ -1.8
CCDC149Q6ZUS6 AC008264.1-201ENST00000447612 367 ntBASIC3.78□□□□□ -1.8
CCDC149Q6ZUS6 NFU1P2-201ENST00000448700 469 ntBASIC3.78□□□□□ -1.8
CCDC149Q6ZUS6 AC069499.1-201ENST00000489433 509 ntBASIC3.78□□□□□ -1.8
CCDC149Q6ZUS6 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC3.78□□□□□ -1.8
CCDC149Q6ZUS6 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC3.78□□□□□ -1.8
CCDC149Q6ZUS6 RNA5SP165-201ENST00000517142 115 ntBASIC3.78□□□□□ -1.8
CCDC149Q6ZUS6 AL157871.3-201ENST00000557231 293 ntBASIC3.78□□□□□ -1.8
CCDC149Q6ZUS6 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC3.78□□□□□ -1.8
CCDC149Q6ZUS6 MIR1273C-201ENST00000578669 77 ntBASIC3.78□□□□□ -1.8
CCDC149Q6ZUS6 MIR5047-201ENST00000579212 100 ntBASIC3.78□□□□□ -1.8
CCDC149Q6ZUS6 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC3.78□□□□□ -1.8
CCDC149Q6ZUS6 AC006077.1-201ENST00000604746 343 ntBASIC3.78□□□□□ -1.8
CCDC149Q6ZUS6 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC3.78□□□□□ -1.8
CCDC149Q6ZUS6 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC3.78□□□□□ -1.8
CCDC149Q6ZUS6 MIR8057-201ENST00000620957 69 ntBASIC3.78□□□□□ -1.8
CCDC149Q6ZUS6 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC3.78□□□□□ -1.8
CCDC149Q6ZUS6 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.81
CCDC149Q6ZUS6 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
CCDC149Q6ZUS6 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
CCDC149Q6ZUS6 NACAP2-201ENST00000318548 624 ntBASIC3.77□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 84 ms