Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC2.71□□□□□ -1.98
NHLRC1Q6VVB1 PSMA2P1-201ENST00000526365 646 ntBASIC2.71□□□□□ -1.98
NHLRC1Q6VVB1 AP003181.2-201ENST00000528941 181 ntBASIC2.71□□□□□ -1.98
NHLRC1Q6VVB1 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC2.71□□□□□ -1.98
NHLRC1Q6VVB1 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC2.71□□□□□ -1.98
NHLRC1Q6VVB1 H3F3AP1-201ENST00000559984 334 ntBASIC2.71□□□□□ -1.98
NHLRC1Q6VVB1 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC2.71□□□□□ -1.98
NHLRC1Q6VVB1 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC2.71□□□□□ -1.98
NHLRC1Q6VVB1 AC024619.4-201ENST00000580924 316 ntBASIC2.71□□□□□ -1.98
NHLRC1Q6VVB1 AC011471.1-201ENST00000585766 187 ntBASIC2.71□□□□□ -1.98
NHLRC1Q6VVB1 AC009977.1-201ENST00000586015 570 ntBASIC2.71□□□□□ -1.98
NHLRC1Q6VVB1 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC2.71□□□□□ -1.98
NHLRC1Q6VVB1 AC121247.2-201ENST00000604776 136 ntBASIC2.71□□□□□ -1.98
NHLRC1Q6VVB1 AC005000.2-201ENST00000605468 310 ntBASIC2.71□□□□□ -1.98
NHLRC1Q6VVB1 AC135507.1-201ENST00000607214 561 ntBASIC2.71□□□□□ -1.98
NHLRC1Q6VVB1 AC022893.3-201ENST00000607665 437 ntBASIC2.71□□□□□ -1.98
NHLRC1Q6VVB1 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC2.71□□□□□ -1.98
NHLRC1Q6VVB1 AC122108.2-201ENST00000611946 526 ntBASIC2.71□□□□□ -1.98
NHLRC1Q6VVB1 AC008250.2-201ENST00000615261 205 ntBASIC2.71□□□□□ -1.98
NHLRC1Q6VVB1 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC2.71□□□□□ -1.98
NHLRC1Q6VVB1 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC2.71□□□□□ -1.98
NHLRC1Q6VVB1 AC131280.1-202ENST00000624067 4211 ntBASIC2.71□□□□□ -1.98
NHLRC1Q6VVB1 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC2.71□□□□□ -1.98
NHLRC1Q6VVB1 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.71□□□□□ -1.98
NHLRC1Q6VVB1 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
NHLRC1Q6VVB1 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
NHLRC1Q6VVB1 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
NHLRC1Q6VVB1 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC2.7□□□□□ -1.98
NHLRC1Q6VVB1 AC010329.5-201ENST00000623497 2174 ntBASIC2.7□□□□□ -1.98
NHLRC1Q6VVB1 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
NHLRC1Q6VVB1 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
NHLRC1Q6VVB1 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
NHLRC1Q6VVB1 SNORA38.1-201ENST00000364172 131 ntBASIC2.7□□□□□ -1.98
NHLRC1Q6VVB1 SNORA68.1-201ENST00000364537 132 ntBASIC2.7□□□□□ -1.98
NHLRC1Q6VVB1 RNA5-8SP4-201ENST00000365096 150 ntBASIC2.7□□□□□ -1.98
NHLRC1Q6VVB1 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.7□□□□□ -1.98
NHLRC1Q6VVB1 RNU6-14P-201ENST00000384630 106 ntBASIC2.7□□□□□ -1.98
NHLRC1Q6VVB1 MIR181B1-201ENST00000385240 110 ntBASIC2.7□□□□□ -1.98
NHLRC1Q6VVB1 AL139397.2-201ENST00000404529 772 ntBASIC2.7□□□□□ -1.98
NHLRC1Q6VVB1 RNA5SP344-201ENST00000411081 104 ntBASIC2.7□□□□□ -1.98
NHLRC1Q6VVB1 AC127391.1-201ENST00000411737 98 ntBASIC2.7□□□□□ -1.98
NHLRC1Q6VVB1 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC2.7□□□□□ -1.98
NHLRC1Q6VVB1 BTF3L4P1-201ENST00000413813 468 ntBASIC2.7□□□□□ -1.98
NHLRC1Q6VVB1 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC2.7□□□□□ -1.98
NHLRC1Q6VVB1 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC2.7□□□□□ -1.98
NHLRC1Q6VVB1 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC2.7□□□□□ -1.98
NHLRC1Q6VVB1 MED13P1-201ENST00000428342 171 ntBASIC2.7□□□□□ -1.98
NHLRC1Q6VVB1 RPL23AP30-201ENST00000432419 501 ntBASIC2.7□□□□□ -1.98
NHLRC1Q6VVB1 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC2.7□□□□□ -1.98
NHLRC1Q6VVB1 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC2.7□□□□□ -1.98
NHLRC1Q6VVB1 MTND1P29-201ENST00000448112 647 ntBASIC2.7□□□□□ -1.98
NHLRC1Q6VVB1 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC2.7□□□□□ -1.98
NHLRC1Q6VVB1 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC2.7□□□□□ -1.98
NHLRC1Q6VVB1 AC007182.2-201ENST00000489251 402 ntBASIC2.7□□□□□ -1.98
NHLRC1Q6VVB1 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC2.7□□□□□ -1.98
NHLRC1Q6VVB1 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC2.7□□□□□ -1.98
NHLRC1Q6VVB1 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC2.7□□□□□ -1.98
NHLRC1Q6VVB1 GLYCAM1-201ENST00000546596 285 ntBASIC2.7□□□□□ -1.98
NHLRC1Q6VVB1 ADI1P3-201ENST00000549509 470 ntBASIC2.7□□□□□ -1.98
NHLRC1Q6VVB1 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC2.7□□□□□ -1.98
NHLRC1Q6VVB1 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC2.7□□□□□ -1.98
NHLRC1Q6VVB1 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC2.7□□□□□ -1.98
NHLRC1Q6VVB1 AC021739.1-201ENST00000559631 174 ntBASIC2.7□□□□□ -1.98
NHLRC1Q6VVB1 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC2.7□□□□□ -1.98
NHLRC1Q6VVB1 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC2.7□□□□□ -1.98
NHLRC1Q6VVB1 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
NHLRC1Q6VVB1 OR2AS2P-201ENST00000606902 342 ntBASIC2.7□□□□□ -1.98
NHLRC1Q6VVB1 AL133173.2-201ENST00000614270 90 ntBASIC2.7□□□□□ -1.98
NHLRC1Q6VVB1 MIR6733-201ENST00000635723 61 ntBASIC2.7□□□□□ -1.98
NHLRC1Q6VVB1 Z99571.1-201ENST00000636677 394 ntBASIC2.7□□□□□ -1.98
NHLRC1Q6VVB1 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.7□□□□□ -1.98
NHLRC1Q6VVB1 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC2.7□□□□□ -1.98
NHLRC1Q6VVB1 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
NHLRC1Q6VVB1 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
NHLRC1Q6VVB1 MTND5P30-201ENST00000452896 1731 ntBASIC2.69□□□□□ -1.98
NHLRC1Q6VVB1 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
NHLRC1Q6VVB1 Y_RNA.51-201ENST00000362725 102 ntBASIC2.69□□□□□ -1.98
NHLRC1Q6VVB1 RNA5SP374-201ENST00000362939 125 ntBASIC2.69□□□□□ -1.98
NHLRC1Q6VVB1 RNU4-24P-201ENST00000364565 139 ntBASIC2.69□□□□□ -1.98
NHLRC1Q6VVB1 RNU4-75P-201ENST00000364621 146 ntBASIC2.69□□□□□ -1.98
NHLRC1Q6VVB1 RNU6-395P-201ENST00000365662 106 ntBASIC2.69□□□□□ -1.98
NHLRC1Q6VVB1 SNORA20.2-201ENST00000383922 131 ntBASIC2.69□□□□□ -1.98
NHLRC1Q6VVB1 SNORD116-9-201ENST00000384000 95 ntBASIC2.69□□□□□ -1.98
NHLRC1Q6VVB1 SNORD116-3-201ENST00000384287 95 ntBASIC2.69□□□□□ -1.98
NHLRC1Q6VVB1 SNORD116-7-201ENST00000384404 95 ntBASIC2.69□□□□□ -1.98
NHLRC1Q6VVB1 SNORD116-5-201ENST00000384462 95 ntBASIC2.69□□□□□ -1.98
NHLRC1Q6VVB1 Y_RNA.505-201ENST00000384489 102 ntBASIC2.69□□□□□ -1.98
NHLRC1Q6VVB1 RNY3P10-201ENST00000384764 102 ntBASIC2.69□□□□□ -1.98
NHLRC1Q6VVB1 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
NHLRC1Q6VVB1 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
NHLRC1Q6VVB1 RPS3AP36-201ENST00000398190 775 ntBASIC2.69□□□□□ -1.98
NHLRC1Q6VVB1 RPA3-203ENST00000401447 414 ntTSL 3 BASIC2.69□□□□□ -1.98
NHLRC1Q6VVB1 AL031121.1-201ENST00000406553 254 ntBASIC2.69□□□□□ -1.98
NHLRC1Q6VVB1 RNU2-39P-201ENST00000410604 198 ntBASIC2.69□□□□□ -1.98
NHLRC1Q6VVB1 AC096664.2-201ENST00000411843 406 ntBASIC2.69□□□□□ -1.98
NHLRC1Q6VVB1 RPS3AP3-201ENST00000411933 242 ntBASIC2.69□□□□□ -1.98
NHLRC1Q6VVB1 AL031779.1-201ENST00000415663 330 ntBASIC2.69□□□□□ -1.98
NHLRC1Q6VVB1 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC2.69□□□□□ -1.98
NHLRC1Q6VVB1 AL109913.1-201ENST00000421173 514 ntBASIC2.69□□□□□ -1.98
NHLRC1Q6VVB1 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC2.69□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 130 ms