Protein–RNA interactions for Protein: Q6UVK1

CSPG4, Chondroitin sulfate proteoglycan 4, humanhuman

Predictions only

Length 2,322 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4Q6UVK1 HSBP1P1-201ENST00000555205 166 ntBASIC0.63□□□□□ -2.31
CSPG4Q6UVK1 UBE2L4-201ENST00000587688 464 ntBASIC0.63□□□□□ -2.31
CSPG4Q6UVK1 AC113194.1-201ENST00000606037 500 ntBASIC0.63□□□□□ -2.31
CSPG4Q6UVK1 AC007038.2-201ENST00000608095 740 ntBASIC0.63□□□□□ -2.31
CSPG4Q6UVK1 AC087359.1-201ENST00000508335 1740 ntBASIC0.62□□□□□ -2.31
CSPG4Q6UVK1 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC0.62□□□□□ -2.31
CSPG4Q6UVK1 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC0.62□□□□□ -2.31
CSPG4Q6UVK1 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC0.62□□□□□ -2.31
CSPG4Q6UVK1 AC098862.1-201ENST00000504991 413 ntBASIC0.62□□□□□ -2.31
CSPG4Q6UVK1 BOLA3P3-201ENST00000505182 232 ntBASIC0.62□□□□□ -2.31
CSPG4Q6UVK1 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC0.62□□□□□ -2.31
CSPG4Q6UVK1 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC0.62□□□□□ -2.31
CSPG4Q6UVK1 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC0.62□□□□□ -2.31
CSPG4Q6UVK1 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC0.62□□□□□ -2.31
CSPG4Q6UVK1 AC013244.2-201ENST00000603396 103 ntBASIC0.62□□□□□ -2.31
CSPG4Q6UVK1 AC015849.6-201ENST00000605454 474 ntBASIC0.62□□□□□ -2.31
CSPG4Q6UVK1 AL391834.1-201ENST00000609609 560 ntBASIC0.62□□□□□ -2.31
CSPG4Q6UVK1 AL118508.4-201ENST00000624142 1176 ntBASIC0.62□□□□□ -2.31
CSPG4Q6UVK1 MIR6866-201ENST00000638146 69 ntBASIC0.62□□□□□ -2.31
CSPG4Q6UVK1 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC0.61□□□□□ -2.31
CSPG4Q6UVK1 AC068050.1-201ENST00000394891 380 ntBASIC0.61□□□□□ -2.31
CSPG4Q6UVK1 AL136372.1-201ENST00000403060 228 ntBASIC0.61□□□□□ -2.31
CSPG4Q6UVK1 AL356432.1-201ENST00000405809 419 ntBASIC0.61□□□□□ -2.31
CSPG4Q6UVK1 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC0.61□□□□□ -2.31
CSPG4Q6UVK1 HSPE1P24-201ENST00000450782 238 ntBASIC0.61□□□□□ -2.31
CSPG4Q6UVK1 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC0.61□□□□□ -2.31
CSPG4Q6UVK1 RNU6-319P-201ENST00000516025 108 ntBASIC0.61□□□□□ -2.31
CSPG4Q6UVK1 RNU6-928P-201ENST00000516876 104 ntBASIC0.61□□□□□ -2.31
CSPG4Q6UVK1 SNORA31.25-201ENST00000517242 134 ntBASIC0.61□□□□□ -2.31
CSPG4Q6UVK1 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC0.61□□□□□ -2.31
CSPG4Q6UVK1 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC0.61□□□□□ -2.31
CSPG4Q6UVK1 MIR3198-2-201ENST00000577868 80 ntBASIC0.61□□□□□ -2.31
CSPG4Q6UVK1 AC055764.2-201ENST00000610089 670 ntBASIC0.61□□□□□ -2.31
CSPG4Q6UVK1 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC0.61□□□□□ -2.31
CSPG4Q6UVK1 FAM157A-202ENST00000615155 405 ntBASIC0.61□□□□□ -2.31
CSPG4Q6UVK1 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC0.61□□□□□ -2.31
CSPG4Q6UVK1 RNU1-23P-201ENST00000363361 144 ntBASIC0.61□□□□□ -2.31
CSPG4Q6UVK1 SNORA2A-201ENST00000383885 135 ntBASIC0.61□□□□□ -2.31
CSPG4Q6UVK1 AP002784.2-201ENST00000397300 549 ntBASIC0.61□□□□□ -2.31
CSPG4Q6UVK1 UBE2D3P2-201ENST00000424409 445 ntBASIC0.61□□□□□ -2.31
CSPG4Q6UVK1 Z80107.1-201ENST00000436830 412 ntBASIC0.61□□□□□ -2.31
CSPG4Q6UVK1 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC0.61□□□□□ -2.31
CSPG4Q6UVK1 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC0.61□□□□□ -2.31
CSPG4Q6UVK1 AC012613.1-201ENST00000522685 387 ntTSL 2 BASIC0.61□□□□□ -2.31
CSPG4Q6UVK1 AL160236.1-201ENST00000556317 195 ntBASIC0.61□□□□□ -2.31
CSPG4Q6UVK1 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC0.61□□□□□ -2.31
CSPG4Q6UVK1 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC0.61□□□□□ -2.31
CSPG4Q6UVK1 MIR4529-201ENST00000578110 78 ntBASIC0.61□□□□□ -2.31
CSPG4Q6UVK1 CYP2C61P-201ENST00000604072 290 ntBASIC0.61□□□□□ -2.31
CSPG4Q6UVK1 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC0.6□□□□□ -2.31
CSPG4Q6UVK1 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC0.6□□□□□ -2.31
CSPG4Q6UVK1 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC0.6□□□□□ -2.31
CSPG4Q6UVK1 USP12PX-201ENST00000432383 1057 ntBASIC0.6□□□□□ -2.31
CSPG4Q6UVK1 MICF-203ENST00000432679 129 ntBASIC0.6□□□□□ -2.31
CSPG4Q6UVK1 AC107626.1-201ENST00000471084 183 ntBASIC0.6□□□□□ -2.31
CSPG4Q6UVK1 BLNK-209ENST00000495266 440 ntTSL 5 BASIC0.6□□□□□ -2.31
CSPG4Q6UVK1 CFAP44-AS1-202ENST00000498480 686 ntTSL 3 BASIC0.6□□□□□ -2.31
CSPG4Q6UVK1 AC103851.1-201ENST00000506833 274 ntBASIC0.6□□□□□ -2.31
CSPG4Q6UVK1 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC0.6□□□□□ -2.31
CSPG4Q6UVK1 NDUFB4P2-201ENST00000509515 391 ntBASIC0.6□□□□□ -2.31
CSPG4Q6UVK1 RNU6-970P-201ENST00000516312 107 ntBASIC0.6□□□□□ -2.31
CSPG4Q6UVK1 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC0.6□□□□□ -2.31
CSPG4Q6UVK1 MIR4636-201ENST00000582271 80 ntBASIC0.6□□□□□ -2.31
CSPG4Q6UVK1 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC0.6□□□□□ -2.31
CSPG4Q6UVK1 AP000654.2-201ENST00000605633 586 ntBASIC0.6□□□□□ -2.31
CSPG4Q6UVK1 AL161629.2-201ENST00000615347 275 ntBASIC0.6□□□□□ -2.31
CSPG4Q6UVK1 UCA1.1-201ENST00000620952 75 ntBASIC0.6□□□□□ -2.31
CSPG4Q6UVK1 AC024595.1-201ENST00000623088 387 ntBASIC0.6□□□□□ -2.31
CSPG4Q6UVK1 AL390862.1-201ENST00000635467 1469 ntBASIC0.6□□□□□ -2.31
CSPG4Q6UVK1 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC0.6□□□□□ -2.31
CSPG4Q6UVK1 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC0.6□□□□□ -2.31
CSPG4Q6UVK1 RNA5SP391-201ENST00000363456 119 ntBASIC0.6□□□□□ -2.31
CSPG4Q6UVK1 RNA5SP499-201ENST00000363982 119 ntBASIC0.6□□□□□ -2.31
CSPG4Q6UVK1 RNU6-1181P-201ENST00000384191 106 ntBASIC0.6□□□□□ -2.31
CSPG4Q6UVK1 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC0.6□□□□□ -2.31
CSPG4Q6UVK1 AC118469.1-201ENST00000442943 488 ntBASIC0.6□□□□□ -2.31
CSPG4Q6UVK1 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC0.6□□□□□ -2.31
CSPG4Q6UVK1 OR6C72P-201ENST00000451403 892 ntBASIC0.6□□□□□ -2.31
CSPG4Q6UVK1 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC0.6□□□□□ -2.31
CSPG4Q6UVK1 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC0.6□□□□□ -2.31
CSPG4Q6UVK1 AC135507.1-201ENST00000607214 561 ntBASIC0.6□□□□□ -2.31
CSPG4Q6UVK1 AL050343.2-201ENST00000607338 280 ntBASIC0.6□□□□□ -2.31
CSPG4Q6UVK1 AL161423.1-201ENST00000613700 262 ntBASIC0.6□□□□□ -2.31
CSPG4Q6UVK1 RMST_5.1-201ENST00000618704 126 ntBASIC0.6□□□□□ -2.31
CSPG4Q6UVK1 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC0.6□□□□□ -2.31
CSPG4Q6UVK1 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC0.59□□□□□ -2.31
CSPG4Q6UVK1 FTH1P15-201ENST00000406984 280 ntBASIC0.59□□□□□ -2.31
CSPG4Q6UVK1 MIR1912-201ENST00000410389 80 ntBASIC0.59□□□□□ -2.31
CSPG4Q6UVK1 RPL30P13-201ENST00000418873 348 ntBASIC0.59□□□□□ -2.31
CSPG4Q6UVK1 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC0.59□□□□□ -2.31
CSPG4Q6UVK1 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC0.59□□□□□ -2.31
CSPG4Q6UVK1 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC0.59□□□□□ -2.31
CSPG4Q6UVK1 AC084033.1-201ENST00000550830 633 ntBASIC0.59□□□□□ -2.31
CSPG4Q6UVK1 MIR4698-201ENST00000577795 80 ntBASIC0.59□□□□□ -2.31
CSPG4Q6UVK1 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC0.59□□□□□ -2.31
CSPG4Q6UVK1 DBF4P1-201ENST00000412976 1892 ntBASIC0.59□□□□□ -2.32
CSPG4Q6UVK1 RNU6-263P-201ENST00000363811 107 ntBASIC0.59□□□□□ -2.32
CSPG4Q6UVK1 PTENP1-201ENST00000447117 1215 ntBASIC0.59□□□□□ -2.32
CSPG4Q6UVK1 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC0.59□□□□□ -2.32
CSPG4Q6UVK1 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC0.59□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 102.2 ms