Protein–RNA interactions for Protein: Q6P9H4

CNKSR3, Connector enhancer of kinase suppressor of ras 3, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3Q6P9H4 Y_RNA.39-201ENST00000362620 98 ntBASIC4.37□□□□□ -1.71
CNKSR3Q6P9H4 RNU6-1078P-201ENST00000364522 103 ntBASIC4.37□□□□□ -1.71
CNKSR3Q6P9H4 SMIM11P1-201ENST00000369586 178 ntBASIC4.37□□□□□ -1.71
CNKSR3Q6P9H4 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC4.37□□□□□ -1.71
CNKSR3Q6P9H4 RNU6-842P-201ENST00000384269 107 ntBASIC4.37□□□□□ -1.71
CNKSR3Q6P9H4 RNU6-713P-201ENST00000384761 107 ntBASIC4.37□□□□□ -1.71
CNKSR3Q6P9H4 RN7SKP167-201ENST00000411047 285 ntBASIC4.37□□□□□ -1.71
CNKSR3Q6P9H4 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC4.37□□□□□ -1.71
CNKSR3Q6P9H4 MAP1LC3BP1-201ENST00000417653 379 ntBASIC4.37□□□□□ -1.71
CNKSR3Q6P9H4 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC4.37□□□□□ -1.71
CNKSR3Q6P9H4 RPL21P109-201ENST00000422213 475 ntBASIC4.37□□□□□ -1.71
CNKSR3Q6P9H4 AL391219.1-201ENST00000422570 483 ntBASIC4.37□□□□□ -1.71
CNKSR3Q6P9H4 RPL23AP69-201ENST00000431134 458 ntBASIC4.37□□□□□ -1.71
CNKSR3Q6P9H4 CHEK2P4-201ENST00000450340 246 ntBASIC4.37□□□□□ -1.71
CNKSR3Q6P9H4 AC005008.1-201ENST00000456151 612 ntBASIC4.37□□□□□ -1.71
CNKSR3Q6P9H4 snoU13.3-201ENST00000459441 104 ntBASIC4.37□□□□□ -1.71
CNKSR3Q6P9H4 RPS23P3-201ENST00000470993 430 ntBASIC4.37□□□□□ -1.71
CNKSR3Q6P9H4 AP001086.1-201ENST00000494882 321 ntBASIC4.37□□□□□ -1.71
CNKSR3Q6P9H4 AC022447.4-201ENST00000504053 364 ntBASIC4.37□□□□□ -1.71
CNKSR3Q6P9H4 RNU2-69P-201ENST00000516061 100 ntBASIC4.37□□□□□ -1.71
CNKSR3Q6P9H4 RNU6-1023P-201ENST00000516137 106 ntBASIC4.37□□□□□ -1.71
CNKSR3Q6P9H4 RNU6-352P-201ENST00000516908 107 ntBASIC4.37□□□□□ -1.71
CNKSR3Q6P9H4 Y_RNA.715-201ENST00000517082 110 ntBASIC4.37□□□□□ -1.71
CNKSR3Q6P9H4 RNU6-323P-201ENST00000521915 107 ntBASIC4.37□□□□□ -1.71
CNKSR3Q6P9H4 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC4.37□□□□□ -1.71
CNKSR3Q6P9H4 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC4.37□□□□□ -1.71
CNKSR3Q6P9H4 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC4.37□□□□□ -1.71
CNKSR3Q6P9H4 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC4.37□□□□□ -1.71
CNKSR3Q6P9H4 AC006254.3-201ENST00000603353 884 ntBASIC4.37□□□□□ -1.71
CNKSR3Q6P9H4 Z98751.3-201ENST00000604447 521 ntBASIC4.37□□□□□ -1.71
CNKSR3Q6P9H4 AC098479.1-201ENST00000609225 154 ntBASIC4.37□□□□□ -1.71
CNKSR3Q6P9H4 AC005344.1-201ENST00000613391 459 ntBASIC4.37□□□□□ -1.71
CNKSR3Q6P9H4 AL138721.1-201ENST00000616756 179 ntBASIC4.37□□□□□ -1.71
CNKSR3Q6P9H4 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
CNKSR3Q6P9H4 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
CNKSR3Q6P9H4 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
CNKSR3Q6P9H4 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
CNKSR3Q6P9H4 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
CNKSR3Q6P9H4 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC4.36□□□□□ -1.71
CNKSR3Q6P9H4 SUPT16HP1-201ENST00000537175 3133 ntBASIC4.36□□□□□ -1.71
CNKSR3Q6P9H4 SNORD35B-201ENST00000363660 87 ntBASIC4.36□□□□□ -1.71
CNKSR3Q6P9H4 RNA5SP97-201ENST00000365006 84 ntBASIC4.36□□□□□ -1.71
CNKSR3Q6P9H4 RNU6-946P-201ENST00000383878 107 ntBASIC4.36□□□□□ -1.71
CNKSR3Q6P9H4 SNORA9-201ENST00000384215 133 ntBASIC4.36□□□□□ -1.71
CNKSR3Q6P9H4 Y_RNA.477-201ENST00000384352 108 ntBASIC4.36□□□□□ -1.71
CNKSR3Q6P9H4 RNU6-393P-201ENST00000384475 107 ntBASIC4.36□□□□□ -1.71
CNKSR3Q6P9H4 SNORA41-201ENST00000384675 132 ntBASIC4.36□□□□□ -1.71
CNKSR3Q6P9H4 MIR483-201ENST00000385070 76 ntBASIC4.36□□□□□ -1.71
CNKSR3Q6P9H4 SNORA3.3-201ENST00000408712 125 ntBASIC4.36□□□□□ -1.71
CNKSR3Q6P9H4 AC096664.2-201ENST00000411843 406 ntBASIC4.36□□□□□ -1.71
CNKSR3Q6P9H4 CALM2P2-201ENST00000428512 440 ntBASIC4.36□□□□□ -1.71
CNKSR3Q6P9H4 RPS3AP12-201ENST00000443616 753 ntBASIC4.36□□□□□ -1.71
CNKSR3Q6P9H4 AL590664.1-201ENST00000448065 339 ntBASIC4.36□□□□□ -1.71
CNKSR3Q6P9H4 OARD1-209ENST00000471367 401 ntTSL 2 BASIC4.36□□□□□ -1.71
CNKSR3Q6P9H4 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC4.36□□□□□ -1.71
CNKSR3Q6P9H4 RPL23AP55-201ENST00000498163 452 ntBASIC4.36□□□□□ -1.71
CNKSR3Q6P9H4 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC4.36□□□□□ -1.71
CNKSR3Q6P9H4 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC4.36□□□□□ -1.71
CNKSR3Q6P9H4 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC4.36□□□□□ -1.71
CNKSR3Q6P9H4 RN7SKP46-201ENST00000515942 234 ntBASIC4.36□□□□□ -1.71
CNKSR3Q6P9H4 RNU7-143P-201ENST00000516781 65 ntBASIC4.36□□□□□ -1.71
CNKSR3Q6P9H4 RNA5SP179-201ENST00000517284 121 ntBASIC4.36□□□□□ -1.71
CNKSR3Q6P9H4 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC4.36□□□□□ -1.71
CNKSR3Q6P9H4 IGHV3-76-201ENST00000522465 295 ntBASIC4.36□□□□□ -1.71
CNKSR3Q6P9H4 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC4.36□□□□□ -1.71
CNKSR3Q6P9H4 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC4.36□□□□□ -1.71
CNKSR3Q6P9H4 RPL23AP87-202ENST00000573039 466 ntBASIC4.36□□□□□ -1.71
CNKSR3Q6P9H4 AC087499.8-201ENST00000578406 226 ntBASIC4.36□□□□□ -1.71
CNKSR3Q6P9H4 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC4.36□□□□□ -1.71
CNKSR3Q6P9H4 AC008162.1-201ENST00000604718 254 ntBASIC4.36□□□□□ -1.71
CNKSR3Q6P9H4 AC091167.4-201ENST00000605079 184 ntBASIC4.36□□□□□ -1.71
CNKSR3Q6P9H4 AL670379.4-201ENST00000605279 254 ntBASIC4.36□□□□□ -1.71
CNKSR3Q6P9H4 AC091953.5-201ENST00000622919 233 ntBASIC4.36□□□□□ -1.71
CNKSR3Q6P9H4 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
CNKSR3Q6P9H4 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC4.36□□□□□ -1.71
CNKSR3Q6P9H4 OSBPL9P4-201ENST00000371707 1800 ntBASIC4.36□□□□□ -1.71
CNKSR3Q6P9H4 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
CNKSR3Q6P9H4 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.36□□□□□ -1.71
CNKSR3Q6P9H4 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
CNKSR3Q6P9H4 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
CNKSR3Q6P9H4 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC4.35□□□□□ -1.71
CNKSR3Q6P9H4 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
CNKSR3Q6P9H4 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
CNKSR3Q6P9H4 Y_RNA.14-201ENST00000362415 103 ntBASIC4.35□□□□□ -1.71
CNKSR3Q6P9H4 Y_RNA.214-201ENST00000364201 112 ntBASIC4.35□□□□□ -1.71
CNKSR3Q6P9H4 SNORA23-201ENST00000365128 182 ntBASIC4.35□□□□□ -1.71
CNKSR3Q6P9H4 Y_RNA.376-201ENST00000365638 108 ntBASIC4.35□□□□□ -1.71
CNKSR3Q6P9H4 SNORA19-201ENST00000384737 128 ntBASIC4.35□□□□□ -1.71
CNKSR3Q6P9H4 RNU6-33P-201ENST00000384793 107 ntBASIC4.35□□□□□ -1.71
CNKSR3Q6P9H4 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
CNKSR3Q6P9H4 RPL21P17-201ENST00000397467 475 ntBASIC4.35□□□□□ -1.71
CNKSR3Q6P9H4 ELOCP20-201ENST00000422460 345 ntBASIC4.35□□□□□ -1.71
CNKSR3Q6P9H4 AL158071.1-201ENST00000430315 461 ntBASIC4.35□□□□□ -1.71
CNKSR3Q6P9H4 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC4.35□□□□□ -1.71
CNKSR3Q6P9H4 RPL23AP50-201ENST00000434149 455 ntBASIC4.35□□□□□ -1.71
CNKSR3Q6P9H4 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC4.35□□□□□ -1.71
CNKSR3Q6P9H4 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC4.35□□□□□ -1.71
CNKSR3Q6P9H4 AC099799.1-201ENST00000439809 192 ntBASIC4.35□□□□□ -1.71
CNKSR3Q6P9H4 AC073910.1-201ENST00000445047 438 ntBASIC4.35□□□□□ -1.71
CNKSR3Q6P9H4 AL445433.1-201ENST00000457507 257 ntBASIC4.35□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 103.2 ms