Protein–RNA interactions for Protein: Q6P499

NIPAL3, NIPA-like protein 3, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3Q6P499 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC2.39□□□□□ -2.03
NIPAL3Q6P499 AL512643.1-201ENST00000635735 524 ntBASIC2.39□□□□□ -2.03
NIPAL3Q6P499 Z99571.1-201ENST00000636677 394 ntBASIC2.39□□□□□ -2.03
NIPAL3Q6P499 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.39□□□□□ -2.03
NIPAL3Q6P499 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.39□□□□□ -2.03
NIPAL3Q6P499 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC2.39□□□□□ -2.03
NIPAL3Q6P499 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
NIPAL3Q6P499 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC2.39□□□□□ -2.03
NIPAL3Q6P499 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.39□□□□□ -2.03
NIPAL3Q6P499 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
NIPAL3Q6P499 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.38□□□□□ -2.03
NIPAL3Q6P499 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
NIPAL3Q6P499 VTRNA1-1-201ENST00000363120 99 ntBASIC2.38□□□□□ -2.03
NIPAL3Q6P499 SNORA80A-201ENST00000363922 136 ntBASIC2.38□□□□□ -2.03
NIPAL3Q6P499 RNU5E-6P-201ENST00000365574 115 ntBASIC2.38□□□□□ -2.03
NIPAL3Q6P499 RNU6-1072P-201ENST00000384703 107 ntBASIC2.38□□□□□ -2.03
NIPAL3Q6P499 RNU6-443P-201ENST00000384780 107 ntBASIC2.38□□□□□ -2.03
NIPAL3Q6P499 MIR301A-201ENST00000385261 86 ntBASIC2.38□□□□□ -2.03
NIPAL3Q6P499 NDUFB4P4-201ENST00000404822 243 ntBASIC2.38□□□□□ -2.03
NIPAL3Q6P499 FCF1P10-201ENST00000407590 479 ntBASIC2.38□□□□□ -2.03
NIPAL3Q6P499 USP9YP6-201ENST00000413550 854 ntBASIC2.38□□□□□ -2.03
NIPAL3Q6P499 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC2.38□□□□□ -2.03
NIPAL3Q6P499 ACTR3BP6-201ENST00000422332 1241 ntBASIC2.38□□□□□ -2.03
NIPAL3Q6P499 AC011233.1-201ENST00000422812 283 ntBASIC2.38□□□□□ -2.03
NIPAL3Q6P499 AC093106.2-201ENST00000428212 385 ntBASIC2.38□□□□□ -2.03
NIPAL3Q6P499 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC2.38□□□□□ -2.03
NIPAL3Q6P499 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC2.38□□□□□ -2.03
NIPAL3Q6P499 AL512286.1-201ENST00000439244 400 ntBASIC2.38□□□□□ -2.03
NIPAL3Q6P499 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC2.38□□□□□ -2.03
NIPAL3Q6P499 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC2.38□□□□□ -2.03
NIPAL3Q6P499 MTND1P12-201ENST00000455231 147 ntBASIC2.38□□□□□ -2.03
NIPAL3Q6P499 RNU7-26P-201ENST00000458980 63 ntBASIC2.38□□□□□ -2.03
NIPAL3Q6P499 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC2.38□□□□□ -2.03
NIPAL3Q6P499 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC2.38□□□□□ -2.03
NIPAL3Q6P499 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC2.38□□□□□ -2.03
NIPAL3Q6P499 RNU6-1183P-201ENST00000517054 60 ntBASIC2.38□□□□□ -2.03
NIPAL3Q6P499 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC2.38□□□□□ -2.03
NIPAL3Q6P499 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC2.38□□□□□ -2.03
NIPAL3Q6P499 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC2.38□□□□□ -2.03
NIPAL3Q6P499 MIR3118-1-201ENST00000581787 76 ntBASIC2.38□□□□□ -2.03
NIPAL3Q6P499 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC2.38□□□□□ -2.03
NIPAL3Q6P499 AL356575.1-201ENST00000603008 283 ntBASIC2.38□□□□□ -2.03
NIPAL3Q6P499 AL359999.1-201ENST00000604513 294 ntBASIC2.38□□□□□ -2.03
NIPAL3Q6P499 AL033523.1-201ENST00000605153 153 ntBASIC2.38□□□□□ -2.03
NIPAL3Q6P499 ATP1B3P1-201ENST00000605365 821 ntBASIC2.38□□□□□ -2.03
NIPAL3Q6P499 AC105129.3-201ENST00000605455 485 ntBASIC2.38□□□□□ -2.03
NIPAL3Q6P499 AC103710.2-201ENST00000609912 942 ntBASIC2.38□□□□□ -2.03
NIPAL3Q6P499 AL449363.1-201ENST00000617815 186 ntBASIC2.38□□□□□ -2.03
NIPAL3Q6P499 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC2.38□□□□□ -2.03
NIPAL3Q6P499 MTND5P42-201ENST00000637720 498 ntBASIC2.38□□□□□ -2.03
NIPAL3Q6P499 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
NIPAL3Q6P499 MTND5P30-201ENST00000452896 1731 ntBASIC2.37□□□□□ -2.03
NIPAL3Q6P499 RNU6-188P-201ENST00000364207 107 ntBASIC2.37□□□□□ -2.03
NIPAL3Q6P499 RNU1-100P-201ENST00000365255 165 ntBASIC2.37□□□□□ -2.03
NIPAL3Q6P499 RNU6-19P-201ENST00000384718 107 ntBASIC2.37□□□□□ -2.03
NIPAL3Q6P499 MIR147B-201ENST00000390185 80 ntBASIC2.37□□□□□ -2.03
NIPAL3Q6P499 SNORD115.1-201ENST00000391109 76 ntBASIC2.37□□□□□ -2.03
NIPAL3Q6P499 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
NIPAL3Q6P499 PTGES3P4-201ENST00000426243 356 ntBASIC2.37□□□□□ -2.03
NIPAL3Q6P499 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC2.37□□□□□ -2.03
NIPAL3Q6P499 AL591212.2-201ENST00000433923 257 ntBASIC2.37□□□□□ -2.03
NIPAL3Q6P499 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC2.37□□□□□ -2.03
NIPAL3Q6P499 HMGB3P12-201ENST00000438745 556 ntBASIC2.37□□□□□ -2.03
NIPAL3Q6P499 BRK1P2-201ENST00000442875 223 ntBASIC2.37□□□□□ -2.03
NIPAL3Q6P499 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC2.37□□□□□ -2.03
NIPAL3Q6P499 AL590365.1-201ENST00000450788 243 ntBASIC2.37□□□□□ -2.03
NIPAL3Q6P499 AC093899.1-201ENST00000457984 376 ntBASIC2.37□□□□□ -2.03
NIPAL3Q6P499 SRIP1-201ENST00000489235 288 ntBASIC2.37□□□□□ -2.03
NIPAL3Q6P499 AC025881.1-201ENST00000518851 512 ntBASIC2.37□□□□□ -2.03
NIPAL3Q6P499 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC2.37□□□□□ -2.03
NIPAL3Q6P499 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC2.37□□□□□ -2.03
NIPAL3Q6P499 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC2.37□□□□□ -2.03
NIPAL3Q6P499 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC2.37□□□□□ -2.03
NIPAL3Q6P499 AC023824.2-201ENST00000566185 400 ntBASIC2.37□□□□□ -2.03
NIPAL3Q6P499 MIR4782-201ENST00000577987 79 ntBASIC2.37□□□□□ -2.03
NIPAL3Q6P499 AC060766.3-201ENST00000591442 263 ntBASIC2.37□□□□□ -2.03
NIPAL3Q6P499 AC091152.3-201ENST00000604227 325 ntBASIC2.37□□□□□ -2.03
NIPAL3Q6P499 MIR7844-201ENST00000616161 122 ntBASIC2.37□□□□□ -2.03
NIPAL3Q6P499 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC2.37□□□□□ -2.03
NIPAL3Q6P499 MIR7157-201ENST00000635801 60 ntBASIC2.37□□□□□ -2.03
NIPAL3Q6P499 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
NIPAL3Q6P499 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC2.37□□□□□ -2.03
NIPAL3Q6P499 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
NIPAL3Q6P499 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
NIPAL3Q6P499 MIR218-1-201ENST00000384999 110 ntBASIC2.36□□□□□ -2.03
NIPAL3Q6P499 MIR9-1-201ENST00000385198 89 ntBASIC2.36□□□□□ -2.03
NIPAL3Q6P499 RNU6-220P-201ENST00000390919 107 ntBASIC2.36□□□□□ -2.03
NIPAL3Q6P499 MTCYBP36-201ENST00000404146 440 ntBASIC2.36□□□□□ -2.03
NIPAL3Q6P499 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC2.36□□□□□ -2.03
NIPAL3Q6P499 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC2.36□□□□□ -2.03
NIPAL3Q6P499 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC2.36□□□□□ -2.03
NIPAL3Q6P499 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC2.36□□□□□ -2.03
NIPAL3Q6P499 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC2.36□□□□□ -2.03
NIPAL3Q6P499 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC2.36□□□□□ -2.03
NIPAL3Q6P499 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC2.36□□□□□ -2.03
NIPAL3Q6P499 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC2.36□□□□□ -2.03
NIPAL3Q6P499 SNORD109B-201ENST00000458961 67 ntBASIC2.36□□□□□ -2.03
NIPAL3Q6P499 SNORD109A-201ENST00000459128 67 ntBASIC2.36□□□□□ -2.03
NIPAL3Q6P499 OARD1-209ENST00000471367 401 ntTSL 2 BASIC2.36□□□□□ -2.03
NIPAL3Q6P499 RPS27P27-201ENST00000498779 255 ntBASIC2.36□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 88.3 ms