Protein–RNA interactions for Protein: Q6NUI1

CCDC144NL, Putative coiled-coil domain-containing protein 144 N-terminal-like, humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144NLQ6NUI1 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
CCDC144NLQ6NUI1 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC3.28□□□□□ -1.88
CCDC144NLQ6NUI1 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.28□□□□□ -1.88
CCDC144NLQ6NUI1 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC3.28□□□□□ -1.88
CCDC144NLQ6NUI1 RNA5SP295-201ENST00000362655 121 ntBASIC3.28□□□□□ -1.88
CCDC144NLQ6NUI1 RN7SKP280-201ENST00000364196 304 ntBASIC3.28□□□□□ -1.88
CCDC144NLQ6NUI1 SNORD14B-201ENST00000364533 90 ntBASIC3.28□□□□□ -1.88
CCDC144NLQ6NUI1 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
CCDC144NLQ6NUI1 AC068538.1-201ENST00000376856 336 ntBASIC3.28□□□□□ -1.88
CCDC144NLQ6NUI1 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC3.28□□□□□ -1.88
CCDC144NLQ6NUI1 AC099548.1-201ENST00000421443 426 ntBASIC3.28□□□□□ -1.88
CCDC144NLQ6NUI1 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC3.28□□□□□ -1.88
CCDC144NLQ6NUI1 HMGN2P30-201ENST00000423237 256 ntBASIC3.28□□□□□ -1.88
CCDC144NLQ6NUI1 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC3.28□□□□□ -1.88
CCDC144NLQ6NUI1 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC3.28□□□□□ -1.88
CCDC144NLQ6NUI1 HMGB1P18-201ENST00000438801 619 ntBASIC3.28□□□□□ -1.88
CCDC144NLQ6NUI1 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC3.28□□□□□ -1.88
CCDC144NLQ6NUI1 AMD1P1-201ENST00000457220 922 ntBASIC3.28□□□□□ -1.88
CCDC144NLQ6NUI1 AL049830.2-201ENST00000480072 201 ntBASIC3.28□□□□□ -1.88
CCDC144NLQ6NUI1 UBE2CP3-201ENST00000502715 450 ntBASIC3.28□□□□□ -1.88
CCDC144NLQ6NUI1 FGF7P4-201ENST00000509595 295 ntBASIC3.28□□□□□ -1.88
CCDC144NLQ6NUI1 RNU6-1088P-201ENST00000516850 104 ntBASIC3.28□□□□□ -1.88
CCDC144NLQ6NUI1 IGKV2-38-201ENST00000517443 247 ntBASIC3.28□□□□□ -1.88
CCDC144NLQ6NUI1 AC087854.1-201ENST00000519706 414 ntBASIC3.28□□□□□ -1.88
CCDC144NLQ6NUI1 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.28□□□□□ -1.88
CCDC144NLQ6NUI1 AC011611.1-201ENST00000552179 197 ntBASIC3.28□□□□□ -1.88
CCDC144NLQ6NUI1 AC025884.1-201ENST00000556034 378 ntBASIC3.28□□□□□ -1.88
CCDC144NLQ6NUI1 H3F3AP1-201ENST00000559984 334 ntBASIC3.28□□□□□ -1.88
CCDC144NLQ6NUI1 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC3.28□□□□□ -1.88
CCDC144NLQ6NUI1 MIR5047-201ENST00000579212 100 ntBASIC3.28□□□□□ -1.88
CCDC144NLQ6NUI1 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC3.28□□□□□ -1.88
CCDC144NLQ6NUI1 AL645944.1-201ENST00000603857 493 ntBASIC3.28□□□□□ -1.88
CCDC144NLQ6NUI1 AL590392.1-201ENST00000604960 446 ntBASIC3.28□□□□□ -1.88
CCDC144NLQ6NUI1 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC3.28□□□□□ -1.88
CCDC144NLQ6NUI1 AC005344.1-201ENST00000613391 459 ntBASIC3.28□□□□□ -1.88
CCDC144NLQ6NUI1 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
CCDC144NLQ6NUI1 AC009233.1-201ENST00000616477 371 ntBASIC3.28□□□□□ -1.88
CCDC144NLQ6NUI1 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC3.28□□□□□ -1.88
CCDC144NLQ6NUI1 AL731566.2-201ENST00000618971 317 ntBASIC3.28□□□□□ -1.88
CCDC144NLQ6NUI1 AC073308.1-201ENST00000623696 305 ntBASIC3.28□□□□□ -1.88
CCDC144NLQ6NUI1 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC3.28□□□□□ -1.88
CCDC144NLQ6NUI1 AC112487.2-201ENST00000637950 304 ntBASIC3.28□□□□□ -1.88
CCDC144NLQ6NUI1 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.28□□□□□ -1.88
CCDC144NLQ6NUI1 AC005183.1-201ENST00000603687 1979 ntBASIC3.28□□□□□ -1.88
CCDC144NLQ6NUI1 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
CCDC144NLQ6NUI1 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC3.28□□□□□ -1.88
CCDC144NLQ6NUI1 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC3.28□□□□□ -1.88
CCDC144NLQ6NUI1 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.27□□□□□ -1.89
CCDC144NLQ6NUI1 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC3.27□□□□□ -1.89
CCDC144NLQ6NUI1 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC3.27□□□□□ -1.89
CCDC144NLQ6NUI1 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC3.27□□□□□ -1.89
CCDC144NLQ6NUI1 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.27□□□□□ -1.89
CCDC144NLQ6NUI1 RNU6-778P-201ENST00000363269 103 ntBASIC3.27□□□□□ -1.89
CCDC144NLQ6NUI1 RNU1-73P-201ENST00000383971 164 ntBASIC3.27□□□□□ -1.89
CCDC144NLQ6NUI1 PTMAP5-201ENST00000393073 333 ntBASIC3.27□□□□□ -1.89
CCDC144NLQ6NUI1 RNU6-628P-201ENST00000410675 107 ntBASIC3.27□□□□□ -1.89
CCDC144NLQ6NUI1 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC3.27□□□□□ -1.89
CCDC144NLQ6NUI1 RPL26P27-201ENST00000414397 437 ntBASIC3.27□□□□□ -1.89
CCDC144NLQ6NUI1 RPL17P36-201ENST00000420302 549 ntBASIC3.27□□□□□ -1.89
CCDC144NLQ6NUI1 NCOR1P3-201ENST00000420479 303 ntBASIC3.27□□□□□ -1.89
CCDC144NLQ6NUI1 SKA2P1-201ENST00000425592 390 ntBASIC3.27□□□□□ -1.89
CCDC144NLQ6NUI1 AL358472.1-201ENST00000431295 329 ntBASIC3.27□□□□□ -1.89
CCDC144NLQ6NUI1 MTATP6P7-201ENST00000453315 681 ntBASIC3.27□□□□□ -1.89
CCDC144NLQ6NUI1 RPL21P11-201ENST00000461458 483 ntBASIC3.27□□□□□ -1.89
CCDC144NLQ6NUI1 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC3.27□□□□□ -1.89
CCDC144NLQ6NUI1 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC3.27□□□□□ -1.89
CCDC144NLQ6NUI1 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC3.27□□□□□ -1.89
CCDC144NLQ6NUI1 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC3.27□□□□□ -1.89
CCDC144NLQ6NUI1 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC3.27□□□□□ -1.89
CCDC144NLQ6NUI1 NUTF2P8-201ENST00000604593 363 ntBASIC3.27□□□□□ -1.89
CCDC144NLQ6NUI1 AL132765.2-201ENST00000610812 351 ntBASIC3.27□□□□□ -1.89
CCDC144NLQ6NUI1 AC104237.2-201ENST00000612456 443 ntBASIC3.27□□□□□ -1.89
CCDC144NLQ6NUI1 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC3.27□□□□□ -1.89
CCDC144NLQ6NUI1 uc_338.15-201ENST00000615470 191 ntBASIC3.27□□□□□ -1.89
CCDC144NLQ6NUI1 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC3.27□□□□□ -1.89
CCDC144NLQ6NUI1 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC3.27□□□□□ -1.89
CCDC144NLQ6NUI1 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
CCDC144NLQ6NUI1 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
CCDC144NLQ6NUI1 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
CCDC144NLQ6NUI1 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
CCDC144NLQ6NUI1 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC3.26□□□□□ -1.89
CCDC144NLQ6NUI1 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
CCDC144NLQ6NUI1 Y_RNA.61-201ENST00000362835 102 ntBASIC3.26□□□□□ -1.89
CCDC144NLQ6NUI1 RNA5SP322-201ENST00000363617 119 ntBASIC3.26□□□□□ -1.89
CCDC144NLQ6NUI1 RNU6-658P-201ENST00000384606 106 ntBASIC3.26□□□□□ -1.89
CCDC144NLQ6NUI1 MIR10A-201ENST00000385043 110 ntBASIC3.26□□□□□ -1.89
CCDC144NLQ6NUI1 AL356057.2-201ENST00000403318 432 ntBASIC3.26□□□□□ -1.89
CCDC144NLQ6NUI1 SNORA3C-201ENST00000408792 125 ntBASIC3.26□□□□□ -1.89
CCDC144NLQ6NUI1 AC007390.1-201ENST00000415722 356 ntBASIC3.26□□□□□ -1.89
CCDC144NLQ6NUI1 AL353729.1-201ENST00000425044 720 ntBASIC3.26□□□□□ -1.89
CCDC144NLQ6NUI1 AL691449.1-201ENST00000426570 421 ntBASIC3.26□□□□□ -1.89
CCDC144NLQ6NUI1 RSL24D1P6-201ENST00000426934 401 ntBASIC3.26□□□□□ -1.89
CCDC144NLQ6NUI1 HMGB1P9-201ENST00000429856 646 ntBASIC3.26□□□□□ -1.89
CCDC144NLQ6NUI1 ARF4P2-201ENST00000430209 526 ntBASIC3.26□□□□□ -1.89
CCDC144NLQ6NUI1 AL158071.1-201ENST00000430315 461 ntBASIC3.26□□□□□ -1.89
CCDC144NLQ6NUI1 AC007389.2-201ENST00000434630 306 ntBASIC3.26□□□□□ -1.89
CCDC144NLQ6NUI1 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.26□□□□□ -1.89
CCDC144NLQ6NUI1 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC3.26□□□□□ -1.89
CCDC144NLQ6NUI1 RNU7-138P-201ENST00000459479 64 ntBASIC3.26□□□□□ -1.89
CCDC144NLQ6NUI1 AL132838.2-201ENST00000492041 314 ntBASIC3.26□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 96.9 ms